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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Genomics enters the deep learning era
Etienne Routhier, Julien Mozziconacci
PeerJ (2022) Vol. 10, pp. e13613-e13613
Open Access | Times Cited: 27

Showing 1-25 of 27 citing articles:

OrthoVenn3: an integrated platform for exploring and visualizing orthologous data across genomes
Jiahe Sun, Fang Lü, Yongjiang Luo, et al.
Nucleic Acids Research (2023) Vol. 51, Iss. W1, pp. W397-W403
Open Access | Times Cited: 228
A systematic review on machine learning approaches in the diagnosis and prognosis of rare genetic diseases
Pablo Román-Naranjo, Alberto M. Parra‐Perez, José A. López‐Escámez
Journal of Biomedical Informatics (2023) Vol. 143, pp. 104429-104429
Open Access | Times Cited: 22
AI's role in revolutionizing personalized medicine by reshaping pharmacogenomics and drug therapy
Hamed Taherdoost, Alireza Ghofrani
Intelligent Pharmacy (2024) Vol. 2, Iss. 5, pp. 643-650
Open Access | Times Cited: 8
DNA promoter task-oriented dictionary mining and prediction model based on natural language technology
Ruolei Zeng, Z. Z. Li, Jialu Li, et al.
Scientific Reports (2025) Vol. 15, Iss. 1
Open Access
Transformers and genome language models
Micaela E. Consens, C Dufault, Michael Wainberg, et al.
Nature Machine Intelligence (2025)
Closed Access
Deep learning-derived 12-lead electrocardiogram-based genotype prediction for hypertrophic cardiomyopathy: a pilot study
Laite Chen, Xia Sheng, Chenyang Jiang
Annals of Medicine (2023) Vol. 55, Iss. 1
Open Access | Times Cited: 15
An Overview of Deep Generative Models in Functional and Evolutionary Genomics
Burak Yelmen, Flora Jay
Annual Review of Biomedical Data Science (2023) Vol. 6, Iss. 1, pp. 173-189
Open Access | Times Cited: 14
DeepReg: a deep learning hybrid model for predicting transcription factors in eukaryotic and prokaryotic genomes
Leonardo Ledesma, Erik Carbajal-Degante, Gabriel Moreno‐Hagelsieb, et al.
Scientific Reports (2024) Vol. 14, Iss. 1
Open Access | Times Cited: 4
Multi-omics approaches for biomarker discovery and precision diagnosis of prediabetes
Junying Song, Chuanfu Wang, Tong Zhao, et al.
Frontiers in Endocrinology (2025) Vol. 16
Open Access
Molecular insights fast-tracked: AI in biosynthetic pathway research
Lijuan Liao, Mengjun Xie, Xiaoshan Zheng, et al.
Natural Product Reports (2025)
Closed Access
Toward a comprehensive catalog of regulatory elements
Kaili Fan, Edith L. Pfister, Zhiping Weng
Human Genetics (2023) Vol. 142, Iss. 8, pp. 1091-1111
Closed Access | Times Cited: 12
Multiple-instance learning of somatic mutations for the classification of tumour type and the prediction of microsatellite status
Jordan Anaya, John-William Sidhom, Faisal Mahmood, et al.
Nature Biomedical Engineering (2023) Vol. 8, Iss. 1, pp. 57-67
Open Access | Times Cited: 9
An Explainable Deep Learning Classifier of Bovine Mastitis Based on Whole-Genome Sequence Data—Circumventing the p >> n Problem
Krzysztof Kotlarz, Magda Mielczarek, Przemysław Biecek, et al.
International Journal of Molecular Sciences (2024) Vol. 25, Iss. 9, pp. 4715-4715
Open Access | Times Cited: 2
AI and the next medical revolution: deep learning's uncharted healthcare promise
L B Krithika, S. Vishnu, Evans Kotei, et al.
Engineering Research Express (2024) Vol. 6, Iss. 2, pp. 022202-022202
Closed Access | Times Cited: 2
Image-based deep learning model using DNA methylation data predicts the origin of cancer of unknown primary
Jinha Hwang, Yeajina Lee, Seong‐Keun Yoo, et al.
Neoplasia (2024) Vol. 55, pp. 101021-101021
Open Access | Times Cited: 2
In silico design of DNA sequences for in vivo nucleosome positioning
Etienne Routhier, Alexandra Joubert, Alex Westbrook, et al.
Nucleic Acids Research (2024) Vol. 52, Iss. 12, pp. 6802-6810
Open Access | Times Cited: 1
Assessing AI literacy and attitudes among medical students: implications for integration into healthcare practice
A Subaveerapandiyan, Dalitso Mvula, Naved Ahmad, et al.
Journal of Health Organization and Management (2024)
Closed Access | Times Cited: 1
An explainable deep learning classifier of bovine mastitis based on whole genome sequence data - circumventing the p>>>n problem
Krzysztof Kotlarz, Magda Mielczarek, Przemysław Biecek, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 2
Nextflow vs. plain Bash: Different Approaches to the Parallelisation of SNP Calling from the Whole Genome Sequence Data
Marek Sztuka, Krzysztof Kotlarz, Magda Mielczarek, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access
APPROACHES TO DIMENSIONALITY REDUCTION FOR ULTRA-HIGH DIMENSIONAL MODELS
Krzysztof Kotlarz, Dawid Słomian, Joanna Szyda
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access
Genome Annotation: Perspective From Bacterial Genomes
Shen Jean Lim, Mathew R. Young
Elsevier eBooks (2024)
Closed Access
Advancing Regulatory Genomics With Machine Learning
Laurent Bréhélin
Bioinformatics and Biology Insights (2024) Vol. 18
Open Access
A systematic review on machine learning approaches in the diagnosis of rare genetic diseases
Pablo Román-Naranjo, AM Parra-Perez, José A. López‐Escámez
medRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 1
DeepMethylation: a deep learning based framework with GloVe and Transformer encoder for DNA methylation prediction
Zhe Wang, Sen Xiang, Chao Zhou, et al.
PeerJ (2023) Vol. 11, pp. e16125-e16125
Open Access | Times Cited: 1
Aggregation Tool for Genomic Concepts (ATGC): A deep learning framework for somatic mutations and other sparse genomic measures
Jordan Anaya, John-William Sidhom, Faisal Mahmood, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2020)
Open Access | Times Cited: 2
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