OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Regulatory roles of Escherichia coli 5' UTR and ORF-internal RNAs detected by 3' end mapping
Philip P. Adams, Gabriele Baniulyte, Caroline Esnault, et al.
eLife (2021) Vol. 10
Open Access | Times Cited: 97

Showing 1-25 of 97 citing articles:

Overlapping genes in natural and engineered genomes
Bradley W. Wright, Mark P. Molloy, Paul R. Jaschke
Nature Reviews Genetics (2021) Vol. 23, Iss. 3, pp. 154-168
Open Access | Times Cited: 96

Nanopore sequencing of RNA and cDNA molecules in Escherichia coli
Felix Grünberger, Sébastien Ferreira-Cerca, Dina Grohmann
RNA (2021) Vol. 28, Iss. 3, pp. 400-417
Open Access | Times Cited: 69

An overview of gene regulation in bacteria by small RNAs derived from mRNA 3′ ends
Falk Ponath, Jens Hör, Jörg Vogel
FEMS Microbiology Reviews (2022) Vol. 46, Iss. 5
Open Access | Times Cited: 59

Global RNA interactome of Salmonella discovers a 5′ UTR sponge for the MicF small RNA that connects membrane permeability to transport capacity
Gianluca Matera, Yaël Altuvia, Milan Gerovac, et al.
Molecular Cell (2022) Vol. 82, Iss. 3, pp. 629-644.e4
Open Access | Times Cited: 56

Transcription-Translation Coupling in Bacteria
Gregor Blaha, Joseph T. Wade
Annual Review of Genetics (2022) Vol. 56, Iss. 1, pp. 187-205
Open Access | Times Cited: 39

Unexpected Richness of the Bacterial Small RNA World
Gisela Storz
Journal of Molecular Biology (2025), pp. 169045-169045
Closed Access | Times Cited: 1

Diversity and Versatility in Small RNA-Mediated Regulation in Bacterial Pathogens
Brice Felden, Yoann Augagneur
Frontiers in Microbiology (2021) Vol. 12
Open Access | Times Cited: 43

RNase III-CLASH of multi-drug resistant Staphylococcus aureus reveals a regulatory mRNA 3′UTR required for intermediate vancomycin resistance
Daniel G. Mediati, Julia L. Wong, Wei Gao, et al.
Nature Communications (2022) Vol. 13, Iss. 1
Open Access | Times Cited: 28

Re-defining how mRNA degradation is coordinated with transcription and translation in bacteria
Seunghyeon Kim, Yuhuan Wang, A Jacob Hassan, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 6

Grad-seq identifies KhpB as a global RNA-binding protein inClostridioides difficilethat regulates toxin production
Vanessa Lamm‐Schmidt, Manuela Fuchs, Johannes Sulzer, et al.
microLife (2021) Vol. 2
Open Access | Times Cited: 38

Premature termination of transcription is shaped by Rho and translated uORFS in Mycobacterium tuberculosis
Alexandre D’Halluin, Peter Polgar, Terry Kipkorir, et al.
iScience (2023) Vol. 26, Iss. 4, pp. 106465-106465
Open Access | Times Cited: 15

In vivo RNA interactome profiling reveals 3’UTR-processed small RNA targeting a central regulatory hub
Fang Liu, Ziying Chen, Shuo Zhang, et al.
Nature Communications (2023) Vol. 14, Iss. 1
Open Access | Times Cited: 15

The environmentally-regulated interplay between local three-dimensional chromatin organisation and transcription of proVWX in E. coli
Fatema‐Zahra M. Rashid, Frédéric Crémazy, Andreas Hofmann, et al.
Nature Communications (2023) Vol. 14, Iss. 1
Open Access | Times Cited: 14

Refining the transcriptional landscapes for distinct clades of virulent phages infecting Pseudomonas aeruginosa
Leena Putzeys, Laura Wicke, Maarten Boon, et al.
microLife (2024) Vol. 5
Open Access | Times Cited: 5

The LysR family transcriptional regulator ORF-L16 regulates spinosad biosynthesis in Saccharopolyspora spinosa.
Xin Mu, Ru Lei, Shuqing Yan, et al.
Synthetic and Systems Biotechnology (2024) Vol. 9, Iss. 4, pp. 609-617
Open Access | Times Cited: 5

RIL-seq reveals extensive involvement of small RNAs in virulence and capsule regulation in hypervirulent Klebsiella pneumoniae
Kwok Jian Goh, Yaël Altuvia, Liron Argaman, et al.
Nucleic Acids Research (2024) Vol. 52, Iss. 15, pp. 9119-9138
Open Access | Times Cited: 5

Genetic evidence for functional diversification of gram-negative intermembrane phospholipid transporters
Ashutosh Kumar, Katsuhiro Sawasato, Haley C. Bennett, et al.
PLoS Genetics (2024) Vol. 20, Iss. 6, pp. e1011335-e1011335
Open Access | Times Cited: 5

Endogenous DNA damage at sites of terminated transcripts
Jingjing Liu, Jullian Perren, Cody M. Rogers, et al.
Nature (2025)
Closed Access

Rho-dependent termination: a bacterial evolutionary capacitor for stress resistance
Sarah B. Worthan, Murray Grant, Megan G. Behringer
Transcription (2025), pp. 1-14
Open Access

A mini-hairpin shaped nascent peptide blocks translation termination by a distinct mechanism
Y. Ando, Akinao Kobo, Tatsuya Niwa, et al.
Nature Communications (2025) Vol. 16, Iss. 1
Open Access

BacTermFinder: a comprehensive and general bacterial terminator finder using a CNN ensemble
Seyed Mohammad Amin Taheri Ghahfarokhi, Lourdes Peña‐Castillo
NAR Genomics and Bioinformatics (2025) Vol. 7, Iss. 1
Open Access

Complementary Ribo-seq approaches map the translatome and provide a small protein census in the foodborne pathogen Campylobacter jejuni
Kathrin Froschauer, Sarah L. Svensson, Rick Gelhausen, et al.
Nature Communications (2025) Vol. 16, Iss. 1
Open Access

Modulation of protein activity by small RNA base pairing internal to coding sequences
Narumon Thongdee, Miranda M Alaniz, Ekaterina Samatova, et al.
Molecular Cell (2025)
Closed Access

Rho-dependent transcription termination: a revisionist view
Zhitai Hao, Vladimir Svetlov, Evgeny Nudler
Transcription (2021) Vol. 12, Iss. 4, pp. 171-181
Open Access | Times Cited: 32

Prediction of Novel Bacterial Small RNAs From RIL-Seq RNA–RNA Interaction Data
Amir Bar, Liron Argaman, Yaël Altuvia, et al.
Frontiers in Microbiology (2021) Vol. 12
Open Access | Times Cited: 31

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