OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Accelerating AutoDock Vina with GPUs
Shidi Tang, Ruiqi Chen, Mengru Lin, et al.
Molecules (2022) Vol. 27, Iss. 9, pp. 3041-3041
Open Access | Times Cited: 65

Showing 1-25 of 65 citing articles:

Vina-GPU 2.0: Further Accelerating AutoDock Vina and Its Derivatives with Graphics Processing Units
Ji Ding, Shidi Tang, Zheming Mei, et al.
Journal of Chemical Information and Modeling (2023) Vol. 63, Iss. 7, pp. 1982-1998
Closed Access | Times Cited: 58

Advancing Ligand Docking through Deep Learning: Challenges and Prospects in Virtual Screening
Xujun Zhang, Chao Shen, Haotian Zhang, et al.
Accounts of Chemical Research (2024) Vol. 57, Iss. 10, pp. 1500-1509
Closed Access | Times Cited: 16

DrugRep: an automatic virtual screening server for drug repurposing
Jianhong Gan, Jixiang Liu, Yang Liu, et al.
Acta Pharmacologica Sinica (2022) Vol. 44, Iss. 4, pp. 888-896
Open Access | Times Cited: 60

Uni-Dock: GPU-Accelerated Docking Enables Ultralarge Virtual Screening
Yuejiang Yu, Chun Cai, Jiayue Wang, et al.
Journal of Chemical Theory and Computation (2023) Vol. 19, Iss. 11, pp. 3336-3345
Closed Access | Times Cited: 37

An accurate and universal protein-small molecule batch docking solution using Autodock Vina
Xinhao Che, Qilei Liu, Lei Zhang
Results in Engineering (2023) Vol. 19, pp. 101335-101335
Open Access | Times Cited: 25

Recent Developments in Ultralarge and Structure-Based Virtual Screening Approaches
Christoph Gorgulla
Annual Review of Biomedical Data Science (2023) Vol. 6, Iss. 1, pp. 229-258
Open Access | Times Cited: 23

Complexation between rice starch and cellulose nanocrystal from black tea residues: Gelatinization properties and digestibility in vitro
Huajian Xu, Zongwei Hao, Junwei Gao, et al.
International Journal of Biological Macromolecules (2023) Vol. 234, pp. 123695-123695
Closed Access | Times Cited: 19

3D based generative PROTAC linker design with reinforcement learning
Baiqing Li, Ting Ran, Hongming Chen
Briefings in Bioinformatics (2023) Vol. 24, Iss. 5
Closed Access | Times Cited: 16

New insights into the influence of encapsulation materials on the feasibility of ultrasonic-assisted encapsulation of Mosla chinensis essential oil
Hailian Wu, Xiaoxia Jiang, Zishu Dong, et al.
Ultrasonics Sonochemistry (2024) Vol. 103, pp. 106787-106787
Open Access | Times Cited: 6

A virtual screening framework based on the binding site selectivity for small molecule drug discovery
Xinhao Che, Qilei Liu, Fang Yu, et al.
Computers & Chemical Engineering (2024) Vol. 184, pp. 108626-108626
Closed Access | Times Cited: 5

Anticancer activity of Ilex khasiana, a rare and endemic species of holly in Northeast India, against murine lymphoma
Charles Lalnunfela, Pawi Bawitlung Lalthanpuii, Hmar Tlawmte Lalremsanga, et al.
Heliyon (2025) Vol. 11, Iss. 2, pp. e41839-e41839
Open Access

DSDP: A Blind Docking Strategy Accelerated by GPUs
Yupeng Huang, Hong Zhang, Siyuan Jiang, et al.
Journal of Chemical Information and Modeling (2023) Vol. 63, Iss. 14, pp. 4355-4363
Open Access | Times Cited: 12

Novel antioxidant peptides from soybean protein by employ computational and experimental methods and their mechanisms of oxidative stress resistance
Ruihong Wang, Yi Zhao, Wenjun Xue, et al.
Journal of Molecular Structure (2024) Vol. 1318, pp. 139284-139284
Closed Access | Times Cited: 4

GPU-optimized approaches to molecular docking-based virtual screening in drug discovery: A comparative analysis
Emanuele Vitali, Federico Ficarelli, Mauro Bisson, et al.
Journal of Parallel and Distributed Computing (2023) Vol. 186, pp. 104819-104819
Open Access | Times Cited: 10

Out of kernel tuning and optimizations for portable large-scale docking experiments on GPUs
Gianmarco Accordi, Davide Gadioli, Emanele Vitali, et al.
The Journal of Supercomputing (2024) Vol. 80, Iss. 8, pp. 11798-11815
Open Access | Times Cited: 3

Docking and other computing tools in drug design against SARS-CoV-2
А.В. Сулимов, Ivan Ilin, Anna Tashchilova, et al.
SAR and QSAR in environmental research (2024) Vol. 35, Iss. 2, pp. 91-136
Closed Access | Times Cited: 3

Harnessing the therapeutic potential of Coccinia grandis phytochemicals in diabetes: A computational, DFT calculation and MMGBSA perspective on aldose reductase inhibition
Nasim Ahmed, Faria Farzana Perveen, Mahfuza Akter, et al.
Informatics in Medicine Unlocked (2024) Vol. 46, pp. 101477-101477
Open Access | Times Cited: 3

Elucidating the mechanism of plasticizers inducing breast cancer through network toxicology and molecular docking analysis
Na He, Chenning Zhang, Ming-Yu Liu, et al.
Ecotoxicology and Environmental Safety (2024) Vol. 284, pp. 116866-116866
Open Access | Times Cited: 3

Effectiveness Analysis of Multiple Initial States Simulated Annealing Algorithm, a Case Study on the Molecular Docking Tool AutoDock Vina
X. R. Zhou, Ming Ling, Qingde Lin, et al.
IEEE/ACM Transactions on Computational Biology and Bioinformatics (2023) Vol. 20, Iss. 6, pp. 3830-3841
Closed Access | Times Cited: 9

Recent advances in chemometric modelling of inhibitors against SARS-CoV-2
Qianqian Wang, Xinyi Lu, Runqing Jia, et al.
Heliyon (2024) Vol. 10, Iss. 2, pp. e24209-e24209
Open Access | Times Cited: 2

Novel Flurbiprofen Derivatives as Antioxidant and Anti-Inflammatory Agents: Synthesis, In Silico, and In Vitro Biological Evaluation
Iliyan Ivanov, Stanimir Manolov, Dimitar Bojilov, et al.
Molecules (2024) Vol. 29, Iss. 2, pp. 385-385
Open Access | Times Cited: 2

HBCVTr: an end-to-end transformer with a deep neural network hybrid model for anti-HBV and HCV activity predictor from SMILES
Ittipat Meewan, Jiraporn Panmanee, Nopphon Petchyam, et al.
Scientific Reports (2024) Vol. 14, Iss. 1
Open Access | Times Cited: 2

Molecular design, construction and analgesic mechanism insights into the novel transdermal fusion peptide ANTP-BgNPB
Xinmeng Peng, Han Tao, Fengyan Xia, et al.
Bioorganic Chemistry (2024) Vol. 148, pp. 107482-107482
Closed Access | Times Cited: 2

Computer Analysis of the Inhibition of ACE2 by Flavonoids and Identification of Their Potential Antiviral Pharmacophore Site
Andrey Bogoyavlenskiy, Madina Alexyuk, Pavel Alexyuk, et al.
Molecules (2023) Vol. 28, Iss. 9, pp. 3766-3766
Open Access | Times Cited: 5

Vina-FPGA: A Hardware-Accelerated Molecular Docking Tool With Fixed-Point Quantization and Low-Level Parallelism
Ming Ling, Qingde Lin, Ruiqi Chen, et al.
IEEE Transactions on Very Large Scale Integration (VLSI) Systems (2022) Vol. 31, Iss. 4, pp. 484-497
Closed Access | Times Cited: 9

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