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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Absolute Binding Free Energy Calculations for Highly Flexible Protein MDM2 and Its Inhibitors
Nidhi Singh, Wenjin Li
International Journal of Molecular Sciences (2020) Vol. 21, Iss. 13, pp. 4765-4765
Open Access | Times Cited: 20

Showing 20 citing articles:

Recent Developments in Free Energy Calculations for Drug Discovery
Edward J. King, Erick Aitchison, Han Li, et al.
Frontiers in Molecular Biosciences (2021) Vol. 8
Open Access | Times Cited: 94
Best Practices for Constructing, Preparing, and Evaluating Protein-Ligand Binding Affinity Benchmarks [Article v1.0]
David F. Hahn, Christopher I. Bayly, Melissa L. Boby, et al.
Living Journal of Computational Molecular Science (2022) Vol. 4, Iss. 1
Open Access | Times Cited: 57
Machine Learning and Enhanced Sampling Simulations for Computing the Potential of Mean Force and Standard Binding Free Energy
Martina Bertazzo, Dorothea Gobbo, Sergio Decherchi, et al.
Journal of Chemical Theory and Computation (2021) Vol. 17, Iss. 8, pp. 5287-5300
Open Access | Times Cited: 40
Insights into the Interaction Mechanisms of Peptide and Non-Peptide Inhibitors with MDM2 Using Gaussian-Accelerated Molecular Dynamics Simulations and Deep Learning
Wanchun Yang, Jian Wang, Lu Zhao, et al.
Molecules (2024) Vol. 29, Iss. 14, pp. 3377-3377
Open Access | Times Cited: 5
Meta-Analysis Reveals That Absolute Binding Free-Energy Calculations Approach Chemical Accuracy
Haohao Fu, Yan-Bang Zhou, Jing Xiang, et al.
Journal of Medicinal Chemistry (2022) Vol. 65, Iss. 19, pp. 12970-12978
Closed Access | Times Cited: 21
Computational insights of deucravacitinib’s selectivity for TYK2 pseudokinase vs. JAK kinase domain via molecular modeling studies
Manish Ramchandani, Amit K. Goyal
Journal of Biomolecular Structure and Dynamics (2025), pp. 1-15
Closed Access
In Silico Drug Repurposing Approach: Investigation of Mycobacterium tuberculosis FadD32 Targeted by FDA-Approved Drugs
Nolwazi Thobeka Portia Ngidi, Kgothatso E. Machaba, Ndumiso N. Mhlongo
Molecules (2022) Vol. 27, Iss. 3, pp. 668-668
Open Access | Times Cited: 11
Comparative Interaction Studies of Quercetin with 2-Hydroxyl-propyl-β-cyclodextrin and 2,6-Methylated-β-cyclodextrin
Vasiliki Vakali, Michail Papadourakis, Nikitas Georgiou, et al.
Molecules (2022) Vol. 27, Iss. 17, pp. 5490-5490
Open Access | Times Cited: 11
Investigating the structural impact of Omicron RBD mutation on antibody escape and receptor management
Samvedna Saini, Savita Pareekh, Yatender Kumar
Journal of Biomolecular Structure and Dynamics (2023) Vol. 42, Iss. 9, pp. 4668-4678
Closed Access | Times Cited: 4
Investigating the Dynamic Binding Behavior of PMX53 Cooperating with Allosteric Antagonist NDT9513727 to C5a Anaphylatoxin Chemotactic Receptor 1 through Gaussian Accelerated Molecular Dynamics and Free-Energy Perturbation Simulations
Xiaoli An, Yuzhen Niu, Qiong Yang, et al.
ACS Chemical Neuroscience (2022) Vol. 13, Iss. 23, pp. 3502-3511
Closed Access | Times Cited: 7
Free energy reconstruction/decomposition from WHAM, force integration and free energy perturbation for an umbrella sampling simulation
Xiao Yang, Cong Zhang, Xiaoning Yang, et al.
Chemical Physics (2022) Vol. 565, pp. 111736-111736
Closed Access | Times Cited: 5
Identification of N-(3-(methyl(3-(orotic amido)propyl)amino)propyl) oleanolamide as a novel topoisomerase I catalytic inhibitor by rational design, molecular dynamics simulation, and biological evaluation
Huang Zeng, Huasong Xie, Qiaonan Ma, et al.
Bioorganic Chemistry (2023) Vol. 139, pp. 106734-106734
Closed Access | Times Cited: 2
Preliminary modelling as the first stage of targeted organic synthesis
Ilya Yu. Titov, Viktor S. Stroylov, Polina Rusina, et al.
Russian Chemical Reviews (2021) Vol. 90, Iss. 7, pp. 831-867
Closed Access | Times Cited: 5
Non-bonding energy directed designing of HDAC2 inhibitors through molecular dynamics simulation
Varun Dewaker, Pratik Narain Srivastava, Saroj Verma, et al.
Journal of Biomolecular Structure and Dynamics (2021) Vol. 40, Iss. 24, pp. 13432-13455
Closed Access | Times Cited: 4
Classical and Machine Learning Methods for Protein - Ligand Binding Free Energy Estimation
Dakshinamurthy Sivakumar, Sangwook Wu
Current Drug Metabolism (2022) Vol. 23, Iss. 4, pp. 252-259
Closed Access | Times Cited: 3
Virtual Screening and Molecular Dynamics Simulation to Identify Inhibitors of the m6A-RNA Reader Protein YTHDC1
Memoona Aslam, Nidhi Singh, Xiaowen Wang, et al.
Applied Sciences (2024) Vol. 14, Iss. 18, pp. 8391-8391
Open Access
Pharmacoinformatics approaches to identify potential hits against tetraacyldisaccharide 4′-kinase (LpxK) ofPseudomonas aeruginosa
Manoj G. Damale, Shahebaaz K. Pathan, Rajesh B. Patil, et al.
RSC Advances (2020) Vol. 10, Iss. 54, pp. 32856-32874
Open Access | Times Cited: 3
Elucidation of Conformational Dynamics of MDM2 and Alterations Induced Upon Inhibitor Binding Using Elastic Network Simulations and Molecular Docking
Nigar Kantarci-Carsibasi
Journal of Computational Biophysics and Chemistry (2021) Vol. 20, Iss. 07, pp. 751-763
Closed Access | Times Cited: 3
Best practices for constructing, preparing, and evaluating protein-ligand binding affinity benchmarks
David F. Hahn, Christopher I. Bayly, Hannah E. Bruce Macdonald, et al.
arXiv (Cornell University) (2021)
Closed Access | Times Cited: 2
A novel synthetic peptide analog enhanced antibacterial activity of the frog-derived skin peptide wuchuanin-A1
Rizki Amalia Putri, Muhammad Saifur Rohman, Respati Tri Swasono, et al.
Journal of Biomolecular Structure and Dynamics (2023), pp. 1-11
Closed Access
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