OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

4mCpred-EL: An Ensemble Learning Framework for Identification of DNA N4-Methylcytosine Sites in the Mouse Genome
Balachandran Manavalan, Shaherin Basith, Tae Hwan Shin, et al.
Cells (2019) Vol. 8, Iss. 11, pp. 1332-1332
Open Access | Times Cited: 91

Showing 1-25 of 91 citing articles:

Machine intelligence in peptide therapeutics: A next‐generation tool for rapid disease screening
Shaherin Basith, Balachandran Manavalan, Tae Hwan Shin, et al.
Medicinal Research Reviews (2020) Vol. 40, Iss. 4, pp. 1276-1314
Closed Access | Times Cited: 253

iLearnPlus:a comprehensive and automated machine-learning platform for nucleic acid and protein sequence analysis, prediction and visualization
Zhen Chen, Pei Zhao, Chen Li, et al.
Nucleic Acids Research (2021) Vol. 49, Iss. 10, pp. e60-e60
Open Access | Times Cited: 194

HLPpred-Fuse: improved and robust prediction of hemolytic peptide and its activity by fusing multiple feature representation
Md Mehedi Hasan, Nalini Schaduangrat, Shaherin Basith, et al.
Bioinformatics (2020) Vol. 36, Iss. 11, pp. 3350-3356
Closed Access | Times Cited: 181

iUmami-SCM: A Novel Sequence-Based Predictor for Prediction and Analysis of Umami Peptides Using a Scoring Card Method with Propensity Scores of Dipeptides
Phasit Charoenkwan, Janchai Yana, Chanin Nantasenamat, et al.
Journal of Chemical Information and Modeling (2020) Vol. 60, Iss. 12, pp. 6666-6678
Closed Access | Times Cited: 117

Meta-i6mA: an interspecies predictor for identifying DNAN6-methyladenine sites of plant genomes by exploiting informative features in an integrative machine-learning framework
Md Mehedi Hasan, Shaherin Basith, Mst. Shamima Khatun, et al.
Briefings in Bioinformatics (2020) Vol. 22, Iss. 3
Closed Access | Times Cited: 112

Computational prediction and interpretation of cell-specific replication origin sites from multiple eukaryotes by exploiting stacking framework
Leyi Wei, Wenjia He, Adeel Malik, et al.
Briefings in Bioinformatics (2020) Vol. 22, Iss. 4
Closed Access | Times Cited: 110

iDNA-MS: An Integrated Computational Tool for Detecting DNA Modification Sites in Multiple Genomes
Hao Lv, Fanny Dao, Dan Zhang, et al.
iScience (2020) Vol. 23, Iss. 4, pp. 100991-100991
Open Access | Times Cited: 103

Early Diagnosis of Hepatocellular Carcinoma Using Machine Learning Method
Zimei Zhang, Jiu-Xin Tan, Fang Wang, et al.
Frontiers in Bioengineering and Biotechnology (2020) Vol. 8
Open Access | Times Cited: 84

Computational identification of N6-methyladenosine sites in multiple tissues of mammals
Fanny Dao, Hao Lv, Yuhe R. Yang, et al.
Computational and Structural Biotechnology Journal (2020) Vol. 18, pp. 1084-1091
Open Access | Times Cited: 84

i6mA-Fuse: improved and robust prediction of DNA 6 mA sites in the Rosaceae genome by fusing multiple feature representation
Md Mehedi Hasan, Balachandran Manavalan, Watshara Shoombuatong, et al.
Plant Molecular Biology (2020) Vol. 103, Iss. 1-2, pp. 225-234
Closed Access | Times Cited: 76

Deep4mC: systematic assessment and computational prediction for DNA N4-methylcytosine sites by deep learning
Haodong Xu, Peilin Jia, Zhongming Zhao
Briefings in Bioinformatics (2020) Vol. 22, Iss. 3
Open Access | Times Cited: 72

Prediction of bio-sequence modifications and the associations with diseases
Chunyan Ao, Liang Yu, Quan Zou
Briefings in Functional Genomics (2020) Vol. 20, Iss. 1, pp. 1-18
Closed Access | Times Cited: 72

iFeatureOmega:an integrative platform for engineering, visualization and analysis of features from molecular sequences, structural and ligand data sets
Zhen Chen, Xuhan Liu, Pei Zhao, et al.
Nucleic Acids Research (2022) Vol. 50, Iss. W1, pp. W434-W447
Open Access | Times Cited: 57

iPro-WAEL: a comprehensive and robust framework for identifying promoters in multiple species
Pengyu Zhang, Hongming Zhang, Hao Wu
Nucleic Acids Research (2022) Vol. 50, Iss. 18, pp. 10278-10289
Open Access | Times Cited: 51

BERT6mA: prediction of DNA N6-methyladenine site using deep learning-based approaches
Sho Tsukiyama, Md Mehedi Hasan, Hong‐Wen Deng, et al.
Briefings in Bioinformatics (2022) Vol. 23, Iss. 2
Open Access | Times Cited: 39

i4mC-Mouse: Improved identification of DNA N4-methylcytosine sites in the mouse genome using multiple encoding schemes
Md Mehedi Hasan, Balachandran Manavalan, Watshara Shoombuatong, et al.
Computational and Structural Biotechnology Journal (2020) Vol. 18, pp. 906-912
Open Access | Times Cited: 65

Deep-4mCW2V: A sequence-based predictor to identify N4-methylcytosine sites in Escherichia coli
Hasan Zulfiqar, Zi‐Jie Sun, Qin-Lai Huang, et al.
Methods (2021) Vol. 203, pp. 558-563
Closed Access | Times Cited: 53

iTTCA-Hybrid: Improved and robust identification of tumor T cell antigens by utilizing hybrid feature representation
Phasit Charoenkwan, Chanin Nantasenamat, Md Mehedi Hasan, et al.
Analytical Biochemistry (2020) Vol. 599, pp. 113747-113747
Closed Access | Times Cited: 52

Deep-4mCGP: A Deep Learning Approach to Predict 4mC Sites in Geobacter pickeringii by Using Correlation-Based Feature Selection Technique
Hasan Zulfiqar, Qin-Lai Huang, Hao Lv, et al.
International Journal of Molecular Sciences (2022) Vol. 23, Iss. 3, pp. 1251-1251
Open Access | Times Cited: 31

4mCBERT: A computing tool for the identification of DNA N4-methylcytosine sites by sequence- and chemical-derived information based on ensemble learning strategies
Sen Yang, Zexi Yang, Jun Yang
International Journal of Biological Macromolecules (2023) Vol. 231, pp. 123180-123180
Closed Access | Times Cited: 16

DeepSF-4mC: A deep learning model for predicting DNA cytosine 4mC methylation sites leveraging sequence features
Zhaomin Yao, Fei Li, Weiming Xie, et al.
Computers in Biology and Medicine (2024) Vol. 171, pp. 108166-108166
Open Access | Times Cited: 6

Empirical Comparison and Analysis of Web-Based DNA N4-Methylcytosine Site Prediction Tools
Balachandran Manavalan, Md Mehedi Hasan, Shaherin Basith, et al.
Molecular Therapy — Nucleic Acids (2020) Vol. 22, pp. 406-420
Open Access | Times Cited: 44

SAResNet: self-attention residual network for predicting DNA-protein binding
Long-Chen Shen, Yan Liu, Jiangning Song, et al.
Briefings in Bioinformatics (2021) Vol. 22, Iss. 5
Open Access | Times Cited: 39

DCNN-4mC: Densely connected neural network based N4-methylcytosine site prediction in multiple species
Mobeen Ur Rehman, Hilal Tayara, Kil To Chong
Computational and Structural Biotechnology Journal (2021) Vol. 19, pp. 6009-6019
Open Access | Times Cited: 37

iDNA-ABT: advanced deep learning model for detecting DNA methylation with adaptive features and transductive information maximization
Yingying Yu, Wenjia He, Junru Jin, et al.
Bioinformatics (2021) Vol. 37, Iss. 24, pp. 4603-4610
Closed Access | Times Cited: 36

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