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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

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Showing 1-25 of 35 citing articles:

Nanopore Is Preferable over Illumina for 16S Amplicon Sequencing of the Gut Microbiota When Species-Level Taxonomic Classification, Accurate Estimation of Richness, or Focus on Rare Taxa Is Required
Márton Szoboszlay, Laetitia Schramm, David Pinzauti, et al.
Microorganisms (2023) Vol. 11, Iss. 3, pp. 804-804
Open Access | Times Cited: 43
Unveiling microbial diversity: harnessing long-read sequencing technology
Daniel Paiva Agustinho, Yilei Fu, Vipin K. Menon, et al.
Nature Methods (2024) Vol. 21, Iss. 6, pp. 954-966
Closed Access | Times Cited: 29
Clinical Diagnostics of Bacterial Infections and Their Resistance to Antibiotics—Current State and Whole Genome Sequencing Implementation Perspectives
Ekaterina Avershina, Abdolrahman Khezri, Rafi Ahmad
Antibiotics (2023) Vol. 12, Iss. 4, pp. 781-781
Open Access | Times Cited: 30
Predictive phage therapy for Escherichia coli urinary tract infections: Cocktail selection for therapy based on machine learning models
Marianne Keith, Alba Park de la Torriente, Antonia Chalka, et al.
Proceedings of the National Academy of Sciences (2024) Vol. 121, Iss. 12
Open Access | Times Cited: 10
Enhancing urinary tract infection diagnosis for negative culture patients with metagenomic next-generation sequencing (mNGS)
Kaipeng Jia, Shiwang Huang, Chong Shen, et al.
Frontiers in Cellular and Infection Microbiology (2023) Vol. 13
Open Access | Times Cited: 16
Advantage of precision metagenomics for urinary tract infection diagnostics
Sadia Almas, Rob E. Carpenter, Chase Rowan, et al.
Frontiers in Cellular and Infection Microbiology (2023) Vol. 13
Open Access | Times Cited: 16
A culture-, amplification-independent, and rapid method for identification of pathogens and antibiotic resistance profile in bovine mastitis milk
Asal Ahmadi, Abdolrahman Khezri, Håvard Nørstebø, et al.
Frontiers in Microbiology (2023) Vol. 13
Open Access | Times Cited: 14
Detection of Pathogens and Antimicrobial Resistance Genes in Ventilator-Associated Pneumonia by Metagenomic Next-Generation Sequencing Approach
Ting Chen, Lei Zhang, Wenhua Huang, et al.
Infection and Drug Resistance (2023) Vol. Volume 16, pp. 923-936
Open Access | Times Cited: 14
Urinary tract infections: a review of the current diagnostics landscape
Braith Grey, Mathew Upton, Lovleen Tina Joshi
Journal of Medical Microbiology (2023) Vol. 72, Iss. 11
Open Access | Times Cited: 13
Comprehensive genomic and plasmid characterization of multidrug-resistant bacterial strains by R10.4.1 nanopore sequencing
Lianwei Ye, Xudong Liu, Ying Ni, et al.
Microbiological Research (2024) Vol. 283, pp. 127666-127666
Closed Access | Times Cited: 5
Clinical evaluation of metagenomic next-generation sequencing in unbiased pathogen diagnosis of urinary tract infection
Ye Wang, Ting Chen, Shengwei Zhang, et al.
Journal of Translational Medicine (2023) Vol. 21, Iss. 1
Open Access | Times Cited: 12
Bacterial enrichment prior to third-generation metagenomic sequencing improves detection of BRD pathogens and genetic determinants of antimicrobial resistance in feedlot cattle
Emily K. Herman, Stacey Lacoste, Claire N. Freeman, et al.
Frontiers in Microbiology (2024) Vol. 15
Open Access | Times Cited: 4
A Simple, Low-Cost, and Efficient Protocol for Rapid Isolation of Pathogenic Bacteria from Human Blood
Fatma S. Coskun, Joshua Quick, Erdal Toprak
(2025)
Closed Access
Applying nanopore sequencing in the etiological diagnosis of bloodstream infection
Yiqun Liao, Junhua Gong, Xiaoling Wang, et al.
Frontiers in Microbiology (2025) Vol. 16
Open Access
Rapid detection of β-lactamase activity using the rapid Amp NP test
Patrice Nordmann, Nicolas Helsens, Nicolas Kieffer, et al.
Microbiology Spectrum (2025)
Open Access
The Clinical Validity and Utility of PCR Compared to Conventional Culture and Sensitivity Testing for the Management of Complicated Urinary Tract Infections in Adults: A Secondary (Ad Hoc) Analysis of Pathogen Detection, Resistance Profiles, and Impact on Clinical Outcomes
Moustafa Kardjadj, Tara I. Chang, Rafael Chavez, et al.
Microorganisms (2025) Vol. 13, Iss. 4, pp. 949-949
Open Access
Detection of pathogens and antimicrobial resistant genes from urine within 5 hours using Nanopore sequencing
Anurag Basavaraj Bellankimath, Crystal Chapagain, Sverre Branders, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 3
Comparison Analysis of Different DNA Extraction Methods on Suitability for Long-Read Metagenomic Nanopore Sequencing
Lei Zhang, Ting Chen, Ye Wang, et al.
Frontiers in Cellular and Infection Microbiology (2022) Vol. 12
Open Access | Times Cited: 16
Detection of pathogens and antimicrobial resistance genes directly from urine samples in patients suspected of urinary tract infection by metagenomics nanopore sequencing: A large‐scale multi‐centre study
Manjiao Liu, Simin Yang, Susheng Wu, et al.
Clinical and Translational Medicine (2023) Vol. 13, Iss. 4
Open Access | Times Cited: 8
Metabarcoding using nanopore long‐read sequencing for the unbiased characterization of apicomplexan haemoparasites
Lucas G. Huggins, Vito Colella, Neil D. Young, et al.
Molecular Ecology Resources (2023) Vol. 24, Iss. 2
Open Access | Times Cited: 8
Infección del tracto urinario por Escherichia coli: factores de riesgo, complicaciones y diagnóstico en mujeres embarazadas
Irma Gisella Parrales-Pincay, Anthony Óscar Bazán-Mosquera, Karla Rosa Castro-Zorrilla
MQRInvestigar (2024) Vol. 8, Iss. 1, pp. 1742-1762
Open Access | Times Cited: 2
Exploring the clinical and diagnostic value of metagenomic next-generation sequencing for urinary tract infection: a systematic review and meta-analysis
Sike He, Haolin Liu, Xu Hu, et al.
BMC Infectious Diseases (2024) Vol. 24, Iss. 1
Open Access | Times Cited: 2
Performance evaluation of whole genome metagenomics sequencing with the MinION nanopore sequencer: Microbial community analysis and antimicrobial resistance gene detection
Akihiro Nakamura, Masaru Komatsu
Journal of Microbiological Methods (2023) Vol. 206, pp. 106688-106688
Closed Access | Times Cited: 6
MC-PRPA-HLFIA Cascade Detection System for Point-of-Care Testing Pan-Drug-Resistant Genes in Urinary Tract Infection Samples
Jin Tao, Dejun Liu, Jincheng Xiong, et al.
International Journal of Molecular Sciences (2023) Vol. 24, Iss. 7, pp. 6784-6784
Open Access | Times Cited: 4
Impact of cell lysis treatment before saliva metagenomic DNA extraction on the oral microbiome and the associated resistome
Supathep Tansirichaiya, Kittikun Songsomboon, Nichamon Chaianant, et al.
Clinical and Experimental Dental Research (2024) Vol. 10, Iss. 4
Open Access | Times Cited: 1
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