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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Computational Biology and Machine Learning Approaches to Understand Mechanistic Microbiome-Host Interactions
Padhmanand Sudhakar, Kathleen Machiels, Bram Verstockt, et al.
Frontiers in Microbiology (2021) Vol. 12
Open Access | Times Cited: 44

Showing 1-25 of 44 citing articles:

Metagenomics and artificial intelligence in the context of human health
Atif Khurshid Wani, Priyanka Roy, Vijay Kumar, et al.
Infection Genetics and Evolution (2022) Vol. 100, pp. 105267-105267
Open Access | Times Cited: 47
Biobased short chain fatty acid production - Exploring microbial community dynamics and metabolic networks through kinetic and microbial modeling approaches
Merve Atasoy, William T. Scott, Alberte Regueira, et al.
Biotechnology Advances (2024) Vol. 73, pp. 108363-108363
Open Access | Times Cited: 8
Integrating multi-omics to unravel host-microbiome interactions in inflammatory bowel disease
Yiran Zhang, John P. Thomas, Tamás Korcsmáros, et al.
Cell Reports Medicine (2024) Vol. 5, Iss. 9, pp. 101738-101738
Open Access | Times Cited: 8
Research hotspot and trend analysis in the diagnosis of inflammatory bowel disease: A machine learning bibliometric analysis from 2012 to 2021
Chuan Liu, Rong Yu, Jixiang Zhang, et al.
Frontiers in Immunology (2022) Vol. 13
Open Access | Times Cited: 30
Computational methods and challenges in analyzing intratumoral microbiome data
Qi Wang, Zhaoqian Liu, Anjun Ma, et al.
Trends in Microbiology (2023) Vol. 31, Iss. 7, pp. 707-722
Open Access | Times Cited: 18
Past, present, and future of microbiome-based therapies
Pilar Manrique, Ignacio Montero, Marta Fernandez-Gosende, et al.
Microbiome Research Reports (2024) Vol. 3, Iss. 2
Open Access | Times Cited: 6
Individual-network based predictions of microbial interaction signatures for response to biological therapies in IBD patients
Federico Melograna, Padhmanand Sudhakar, Behnam Yousefi, et al.
Frontiers in Molecular Biosciences (2025) Vol. 11
Open Access
Integrating multi-omics data to reveal the host-microbiota interactome in inflammatory bowel disease
Faye Su, Meng Su, Wenting Wei, et al.
Gut Microbes (2025) Vol. 17, Iss. 1
Open Access
Gut microbiota and epigenetic inheritance: implications for the development of IBD
Xue Guo, Jianhong Li, Jing Xu, et al.
Gut Microbes (2025) Vol. 17, Iss. 1
Open Access
Tailoring Multi-omics to Inflammatory Bowel Diseases: All for One and One for All
Padhmanand Sudhakar, Dahham Alsoud, Judith Wellens, et al.
Journal of Crohn s and Colitis (2022) Vol. 16, Iss. 8, pp. 1306-1320
Open Access | Times Cited: 19
A multitask transfer learning framework for the prediction of virus-human protein–protein interactions
Thi Ngan Dong, Graham Brogden, Gisa Gerold, et al.
BMC Bioinformatics (2021) Vol. 22, Iss. 1
Open Access | Times Cited: 23
APOLLO: A genome-scale metabolic reconstruction resource of 247,092 diverse human microbes spanning multiple continents, age groups, and body sites
Almut Heinken, Timothy Otto Hulshof, Bram Nap, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 8
Microbial influence on blood pressure: unraveling the complex relationship for health insights
Alexander Machado Cardoso
Microbiome Research Reports (2024) Vol. 3, Iss. 2
Open Access | Times Cited: 2
Computational prediction of new therapeutic effects of probiotics
Sadegh Sulaimany, Kajal Farahmandi, Aso Mafakheri
Scientific Reports (2024) Vol. 14, Iss. 1
Open Access | Times Cited: 2
Current Trends and Technological Advancements in the Study of Honey Bee-Derived Peptides with an Emphasis on State-of-the-Art Approaches: A Review
Wissam K. Al-Rubaie, Dhia F. Al‐Fekaiki, Alaa Kareem Niamah, et al.
Separations (2024) Vol. 11, Iss. 6, pp. 166-166
Open Access | Times Cited: 2
A machine learning-based strategy to elucidate the identification of antibiotic resistance in bacteria
Kaushik Parthasarathi, Kiran Bharat Gaikwad, Shruthy Rajesh, et al.
Frontiers in Antibiotics (2024) Vol. 3
Open Access | Times Cited: 2
Efficient and Quality-Optimized Metagenomic Pipeline Designed for Taxonomic Classification in Routine Microbiological Clinical Tests
Sylvie Buffet‐Bataillon, Guillaume Rizk, Vincent Cattoir, et al.
Microorganisms (2022) Vol. 10, Iss. 4, pp. 711-711
Open Access | Times Cited: 12
Absorption, distribution, metabolism, excretion, and toxicity assessment of drugs using computational tools
P. Sucharitha, K. Ramesh Reddy, S.V. Satyanarayana, et al.
Elsevier eBooks (2022), pp. 335-355
Closed Access | Times Cited: 11
Exploration of Computational Aids for Effective Drug Designing and Management of Viral Diseases: A Comprehensive Review
Tahmeena Khan, Saman Raza
Current Topics in Medicinal Chemistry (2023) Vol. 23, Iss. 17, pp. 1640-1663
Closed Access | Times Cited: 6
Metabolic modeling of synthetic microbial communities for bioremediation
Lvjing Wang, Xiaoyu Wang, Hao Wu, et al.
Critical Reviews in Environmental Science and Technology (2023) Vol. 53, Iss. 24, pp. 2092-2111
Closed Access | Times Cited: 5
Network Biology Approaches to Achieve Precision Medicine in Inflammatory Bowel Disease
John P. Thomas, Dezső Módos, Tamás Korcsmáros, et al.
Frontiers in Genetics (2021) Vol. 12
Open Access | Times Cited: 12
Computational methods for detection of host-pathogen interactions
Samvedna Singh, Himanshi Gupta, Shakti Sahi
Elsevier eBooks (2024), pp. 103-130
Closed Access | Times Cited: 1
Host-pathogen interactions: databases and approaches for data generation
Yasmin Bano, Abhinav Shrivastava
Elsevier eBooks (2024), pp. 15-51
Closed Access | Times Cited: 1
Microbiome and infectious disease: diagnostics to therapeutics
Rawan Zaatry, Rachel Herren, Tal Gefen, et al.
Microbes and Infection (2024) Vol. 26, Iss. 7, pp. 105345-105345
Closed Access | Times Cited: 1
Current Trend and Performance Evaluation of Machine Learning Methods for Predicting Host-Pathogen Protein-Protein Interactions
Jerry Emmanuel, Itunuoluwa Isewon, Grace I. Olasehinde, et al.
(2024), pp. 1-14
Closed Access | Times Cited: 1
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