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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Automated Deep Lineage Tree Analysis Using a Bayesian Single Cell Tracking Approach
Kristina Ulicna, Giulia Vallardi, Guillaume Charras, et al.
Frontiers in Computer Science (2021) Vol. 3
Open Access | Times Cited: 72

Showing 1-25 of 72 citing articles:

Prediction of single-cell RNA expression profiles in live cells by Raman microscopy with Raman2RNA
Koseki J. Kobayashi-Kirschvink, Charles Comiter, Shreya Gaddam, et al.
Nature Biotechnology (2024) Vol. 42, Iss. 11, pp. 1726-1734
Open Access | Times Cited: 26
Segmentation, tracking and cell cycle analysis of live-cell imaging data with Cell-ACDC
Francesco Padovani, Benedikt Mairhörmann, Pascal Braun, et al.
BMC Biology (2022) Vol. 20, Iss. 1
Open Access | Times Cited: 44
The molecular architecture of cell cycle arrest
Wayne Stallaert, Sovanny R. Taylor, Katarzyna M. Kedziora, et al.
Molecular Systems Biology (2022) Vol. 18, Iss. 9
Open Access | Times Cited: 43
Bridging live-cell imaging and next-generation cancer treatment
María Alieva, Amber K. L. Wezenaar, Ellen J. Wehrens, et al.
Nature reviews. Cancer (2023) Vol. 23, Iss. 11, pp. 731-745
Closed Access | Times Cited: 34
Microsystem Advances through Integration with Artificial Intelligence
Hsieh‐Fu Tsai, Soumyajit Podder, Pin‐Yuan Chen
Micromachines (2023) Vol. 14, Iss. 4, pp. 826-826
Open Access | Times Cited: 21
cellPLATO – an unsupervised method for identifying cell behaviour in heterogeneous cell trajectory data
Michael J. Shannon, Shira E. Eisman, Alan R. Lowe, et al.
Journal of Cell Science (2024) Vol. 137, Iss. 20
Open Access | Times Cited: 9
Learning biophysical determinants of cell fate with deep neural networks
Christopher J. Soelistyo, Giulia Vallardi, Guillaume Charras, et al.
Nature Machine Intelligence (2022) Vol. 4, Iss. 7, pp. 636-644
Open Access | Times Cited: 28
Epithelial outgrowth through mesenchymal rings drives alveologenesis
Nicholas M. Negretti, Yeongseo Son, Philip S. Crooke, et al.
JCI Insight (2025)
Open Access
DeepKymoTracker: A tool for accurate construction of cell lineage trees for highly motile cells
Khelina Fedorchuk, Sarah M. Russell, Kajal Zibaei, et al.
PLoS ONE (2025) Vol. 20, Iss. 2, pp. e0315947-e0315947
Open Access
Celldetective: an AI-enhanced image analysis tool for unraveling dynamic cell interactions
Rémy Torro, Beatriz Díaz-Bello, Dalia El Arawi, et al.
(2025)
Open Access
Celldetective: an AI-enhanced image analysis tool for unraveling dynamic cell interactions
Rémy Torro, Beatriz Díaz-Bello, Dalia El Arawi, et al.
(2025)
Open Access
Self-organization of mouse embryonic stem cells into reproducible pre-gastrulation embryo models via CRISPRa programming
Gerrald A. Lodewijk, Sayaka Kozuki, Clara Han, et al.
Cell stem cell (2025)
Open Access
Caliban: Accurate cell tracking and lineage construction in live-cell imaging experiments with deep learning
Morgan Schwartz, Erick Moen, Geneva Miller, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2019)
Open Access | Times Cited: 50
Antiviral responses are shaped by heterogeneity in viral replication dynamics
Lucas J. M. Bruurs, Micha Müller, Jelle G. Schipper, et al.
Nature Microbiology (2023) Vol. 8, Iss. 11, pp. 2115-2129
Open Access | Times Cited: 15
Tracking Somatic Mutations for Lineage Reconstruction
Yaara Neumeier, Ofir Raz, Liming Tao, et al.
Methods in molecular biology (2025), pp. 23-45
Closed Access
Prickle2 regulates apical junction remodeling and tissue fluidity during vertebrate neurulation
Miho Matsuda, Sergei Y. Sokol
The Journal of Cell Biology (2025) Vol. 224, Iss. 4
Open Access
Cecelia: a multifunctional image analysis toolbox for decoding spatial cellular interactions and behaviour
Dominik Schienstock, Jyh Liang Hor, Sapna Devi, et al.
Nature Communications (2025) Vol. 16, Iss. 1
Open Access
CD56/NCAM mediates cell migration of human NK cells by promoting integrin-mediated adhesion turnover
Amera L. Martinez, Michael J. Shannon, Tyler Sloan, et al.
Molecular Biology of the Cell (2024) Vol. 35, Iss. 5
Open Access | Times Cited: 3
Application of tissue-scale tension to avian epitheliain vivoto study multiscale mechanical properties and inter-germ layer coupling
Panagiotis Oikonomou, Lisa Calvary, Helena C. Cirne, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 3
Regulation of intercellular viscosity by E-cadherin-dependent phosphorylation of EGFR in collective cell migration
Chaoyu Fu, Florian Dilasser, Shao‐Zhen Lin, et al.
Proceedings of the National Academy of Sciences (2024) Vol. 121, Iss. 37
Open Access | Times Cited: 3
Machine learning enhanced cell tracking
Christopher J. Soelistyo, Kristina Ulicna, Alan R. Lowe
Frontiers in Bioinformatics (2023) Vol. 3
Open Access | Times Cited: 9
High-throughput image processing software for the study of nuclear architecture and gene expression
Adib Keikhosravi, Faisal Almansour, Christopher H. Bohrer, et al.
Scientific Reports (2024) Vol. 14, Iss. 1
Open Access | Times Cited: 3
Spectrally Tunable Förster Resonance Energy Transfer-Based Biosensors Using Organic Dye Grafting
Marco Dalla Vecchia, Amandine Conte‐Daban, Benjamin Cappe, et al.
ACS Sensors (2022) Vol. 7, Iss. 10, pp. 2920-2927
Closed Access | Times Cited: 14
Learning dynamic image representations for self-supervised cell cycle annotation
Kristina Ulicna, Manasi Kelkar, Christopher J. Soelistyo, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 8
Deep Learning–Based 3D Single-Cell Imaging Analysis Pipeline Enables Quantification of Cell–Cell Interaction Dynamics in the Tumor Microenvironment
Bodong Liu, Yanting Zhu, Zhenye Yang, et al.
Cancer Research (2023) Vol. 84, Iss. 4, pp. 517-526
Open Access | Times Cited: 7
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