OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

<p>Current Challenges and Opportunities in Designing Protein–Protein Interaction Targeted Drugs</p>
Woong‐Hee Shin, Keiko Kumazawa, Kenichiro Imai, et al.
Advances and Applications in Bioinformatics and Chemistry (2020) Vol. Volume 13, pp. 11-25
Open Access | Times Cited: 54

Showing 1-25 of 54 citing articles:

Virtual screening and molecular dynamics simulations provide insight into repurposing drugs against SARS-CoV-2 variants Spike protein/ACE2 interface
Davide Pirolli, Benedetta Righino, Chiara Camponeschi, et al.
Scientific Reports (2023) Vol. 13, Iss. 1
Open Access | Times Cited: 38

Challenges in Discovering Drugs That Target the Protein–Protein Interactions of Disordered Proteins
Judit Oláh, Tibor Szénási, Attila Lehotzky, et al.
International Journal of Molecular Sciences (2022) Vol. 23, Iss. 3, pp. 1550-1550
Open Access | Times Cited: 28

SiteRadar: Utilizing Graph Machine Learning for Precise Mapping of Protein–Ligand-Binding Sites
Sergei A. Evteev, Alexey V. Ereshchenko, Yan A. Ivanenkov
Journal of Chemical Information and Modeling (2023) Vol. 63, Iss. 4, pp. 1124-1132
Closed Access | Times Cited: 15

Structure-based assessment and druggability classification of protein–protein interaction sites
Lara Alzyoud, Richard A. Bryce, Mohammad Al Sorkhy, et al.
Scientific Reports (2022) Vol. 12, Iss. 1
Open Access | Times Cited: 23

Discovery of Ligands for TRIM58, a Novel Tissue-Selective E3 Ligase
Klemens Hoegenauer, Shaojian An, Jake Axford, et al.
ACS Medicinal Chemistry Letters (2023) Vol. 14, Iss. 12, pp. 1631-1639
Closed Access | Times Cited: 14

Targeting Protein–Protein Interfaces with Peptides: The Contribution of Chemical Combinatorial Peptide Library Approaches
Alessandra Monti, Luigi Vitagliano, Andrea Caporale, et al.
International Journal of Molecular Sciences (2023) Vol. 24, Iss. 9, pp. 7842-7842
Open Access | Times Cited: 12

Mapping the binding sites of challenging drug targets
Amanda Wakefield, Dima Kozakov, Sándor Vajda
Current Opinion in Structural Biology (2022) Vol. 75, pp. 102396-102396
Open Access | Times Cited: 21

A dynamical view of protein-protein complexes: Studies by molecular dynamics simulations
Juliette Martin, Elisa Frezza
Frontiers in Molecular Biosciences (2022) Vol. 9
Open Access | Times Cited: 19

Design of Cyclic Peptides Targeting Protein–Protein Interactions Using AlphaFold
Takatsugu Kosugi, Masahito Ohue
International Journal of Molecular Sciences (2023) Vol. 24, Iss. 17, pp. 13257-13257
Open Access | Times Cited: 11

Bioinformatics approach for structure modeling, vaccine design, and molecular docking of Brucella candidate proteins BvrR, OMP25, and OMP31
Alyaa Elrashedy, Mohamed Nayel, Akram Salama, et al.
Scientific Reports (2024) Vol. 14, Iss. 1
Open Access | Times Cited: 3

Mixed Stereochemistry Macrocycle Acts as a Helix-Stabilizing Peptide N-Cap
Fabian Hink, Julen Aduriz‐Arrizabalaga, Xabier López, et al.
Journal of the American Chemical Society (2024) Vol. 146, Iss. 35, pp. 24348-24357
Open Access | Times Cited: 3

Targeting cryptic-orthosteric site of PD-L1 for inhibitor identification using structure-guided approach
Lovika Mittal, Rajiv Kumar Tonk, Amit Awasthi, et al.
Archives of Biochemistry and Biophysics (2021) Vol. 713, pp. 109059-109059
Closed Access | Times Cited: 26

Quantitative Estimate Index for Early-Stage Screening of Compounds Targeting Protein-Protein Interactions
Takatsugu Kosugi, Masahito Ohue
International Journal of Molecular Sciences (2021) Vol. 22, Iss. 20, pp. 10925-10925
Open Access | Times Cited: 25

Design of Peptide-Based Protein Degraders via Contrastive Deep Learning
Kalyan Palepu, Manvitha Ponnapati, Suhaas Bhat, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2022)
Closed Access | Times Cited: 16

Solubility-Aware Protein Binding Peptide Design Using AlphaFold
Takatsugu Kosugi, Masahito Ohue
Biomedicines (2022) Vol. 10, Iss. 7, pp. 1626-1626
Open Access | Times Cited: 14

Database-Driven Identification of Structurally Similar Protein-Protein Interfaces
Joel Graef, Christiane Ehrt, Thorben Reim, et al.
Journal of Chemical Information and Modeling (2024) Vol. 64, Iss. 8, pp. 3332-3349
Open Access | Times Cited: 2

Revisiting Pyrimidine-Embedded Molecular Frameworks to Probe the Unexplored Chemical Space for Protein–Protein Interactions
Jeong Yeon Yoo, Yoona Choi, Heejun Kim, et al.
Accounts of Chemical Research (2024) Vol. 57, Iss. 22, pp. 3254-3265
Open Access | Times Cited: 2

Identification of small-molecule protein–protein interaction inhibitors for NKG2D
Aaron A. Thompson, Michael B. Harbut, Pei‐Pei Kung, et al.
Proceedings of the National Academy of Sciences (2023) Vol. 120, Iss. 18
Open Access | Times Cited: 7

Analysis of physicochemical properties of protein–protein interaction modulators suggests stronger alignment with the “rule of five”
Jia Q. Truong, Ashwin George, Jessica K. Holien
RSC Medicinal Chemistry (2021) Vol. 12, Iss. 10, pp. 1731-1749
Open Access | Times Cited: 17

First-in-Class Allosteric Inhibitors of DNMT3A Disrupt Protein–Protein Interactions and Induce Acute Myeloid Leukemia Cell Differentiation
Jonathan E. Sandoval, Raghav Ramabadran, Nathaniel J. Stillson, et al.
Journal of Medicinal Chemistry (2022) Vol. 65, Iss. 15, pp. 10554-10566
Closed Access | Times Cited: 11

Funneling modulatory peptide design with generative models: Discovery and characterization of disruptors of calcineurin protein-protein interactions
Jérôme Tubiana, Lucia Adriana-Lifshits, Michael Nissan, et al.
PLoS Computational Biology (2023) Vol. 19, Iss. 2, pp. e1010874-e1010874
Open Access | Times Cited: 5

Going beyond Binary: Rapid Identification of Protein–Protein Interaction Modulators Using a Multifragment Kinetic Target-Guided Synthesis Approach
Katya Pavlova Nacheva, Sameer S. Kulkarni, Mintesinot Kassu, et al.
Journal of Medicinal Chemistry (2023) Vol. 66, Iss. 7, pp. 5196-5207
Open Access | Times Cited: 5

Molecular-Scale Investigations Reveal the Effect of Natural Polyphenols on BAX/Bcl-2 Interactions
Heng Sun, Fenghui Liao, Yichen Tian, et al.
International Journal of Molecular Sciences (2024) Vol. 25, Iss. 5, pp. 2474-2474
Open Access | Times Cited: 1

Validation of aminodeoxychorismate synthase and anthranilate synthase as novel targets for bispecific antibiotics inhibiting conserved protein-protein interactions
Franziska Jasmin Funke, Sandra Schlee, Reinhard Sterner
Applied and Environmental Microbiology (2024) Vol. 90, Iss. 5
Closed Access | Times Cited: 1

PLM-interact: extending protein language models to predict protein-protein interactions
Dan Liu, Francesca Young, Kieran D. Lamb, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 1

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