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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

CRBPDL: Identification of circRNA-RBP interaction sites using an ensemble neural network approach
Mengting Niu, Quan Zou, Chen Lin
PLoS Computational Biology (2022) Vol. 18, Iss. 1, pp. e1009798-e1009798
Open Access | Times Cited: 45

Showing 1-25 of 45 citing articles:

Transformer Architecture and Attention Mechanisms in Genome Data Analysis: A Comprehensive Review
Sanghyuk Roy Choi, Minhyeok Lee
Biology (2023) Vol. 12, Iss. 7, pp. 1033-1033
Open Access | Times Cited: 63
Predicting CircRNA-Disease Associations via Feature Convolution Learning With Heterogeneous Graph Attention Network
Peng Li, Yang Cheng, Yi‐Fan Chen, et al.
IEEE Journal of Biomedical and Health Informatics (2023) Vol. 27, Iss. 6, pp. 3072-3082
Closed Access | Times Cited: 41
SSCRB: Predicting circRNA-RBP Interaction Sites Using a Sequence and Structural Feature-Based Attention Model
Liwei Liu, Yuxiao Wei, Qi Zhang, et al.
IEEE Journal of Biomedical and Health Informatics (2024) Vol. 28, Iss. 3, pp. 1762-1772
Closed Access | Times Cited: 21
Functions of Circular RNA in Human Diseases and Illnesses
Alison Gu, Dabbu Kumar Jaijyan, Shaomin Yang, et al.
Non-Coding RNA (2023) Vol. 9, Iss. 4, pp. 38-38
Open Access | Times Cited: 30
An Encoding-Decoding Framework Based on CNN for circRNA-RBP Binding Sites Prediction
Yajing Guo, Xiujuan Lei, Yi Pan
Chinese Journal of Electronics (2024) Vol. 33, Iss. 1, pp. 256-263
Open Access | Times Cited: 9
Deep learning and ensemble deep learning for circRNA-RBP interaction prediction in the last decade: A review
Dilan Lasantha, Sugandima Vidanagamachchi, Sam Nallaperuma
Engineering Applications of Artificial Intelligence (2023) Vol. 123, pp. 106352-106352
Closed Access | Times Cited: 19
iCircDA-NEAE: Accelerated attribute network embedding and dynamic convolutional autoencoder for circRNA-disease associations prediction
Lin Yuan, Jiawang Zhao, Zhen Shen, et al.
PLoS Computational Biology (2023) Vol. 19, Iss. 8, pp. e1011344-e1011344
Open Access | Times Cited: 18
CircSI-SSL: circRNA-binding site identification based on self-supervised learning
Chao Cao, Chunyu Wang, Shuhong Yang, et al.
Bioinformatics (2024) Vol. 40, Iss. 1
Open Access | Times Cited: 6
CircSSNN: circRNA-binding site prediction via sequence self-attention neural networks with pre-normalization
Chao Cao, Shuhong Yang, Mengli Li, et al.
BMC Bioinformatics (2023) Vol. 24, Iss. 1
Open Access | Times Cited: 14
LSA-ac4C: A hybrid neural network incorporating double-layer LSTM and self-attention mechanism for the prediction of N4-acetylcytidine sites in human mRNA
Fei-Liao Lai, Feng Gao
International Journal of Biological Macromolecules (2023) Vol. 253, pp. 126837-126837
Closed Access | Times Cited: 13
CRIECNN: Ensemble convolutional neural network and advanced feature extraction methods for the precise forecasting of circRNA-RBP binding sites
Dilan Lasantha, Sugandima Vidanagamachchi, Sam Nallaperuma
Computers in Biology and Medicine (2024) Vol. 174, pp. 108466-108466
Closed Access | Times Cited: 5
iCRBP-LKHA: Large convolutional kernel and hybrid channel-spatial attention for identifying circRNA-RBP interaction sites
Lin Yuan, Ling Zhao, Jinling Lai, et al.
PLoS Computational Biology (2024) Vol. 20, Iss. 8, pp. e1012399-e1012399
Open Access | Times Cited: 5
A Brief Survey of Deep Learning-based Models for CircRNA-Protein Binding Sites Prediction
Zhen Shen, Lin Yuan, Wenzheng Bao, et al.
Neurocomputing (2025), pp. 129637-129637
Open Access
CR-deal: Explainable Neural Network for circRNA-RBP Binding Site Recognition and Interpretation
Yuxiao Wei, Zhebin Tan, Liwei Liu
Interdisciplinary Sciences Computational Life Sciences (2025)
Closed Access
iDRNA-ITF: identifying DNA- and RNA-binding residues in proteins based on induction and transfer framework
Ning Wang, Ke Yan, Jun Zhang, et al.
Briefings in Bioinformatics (2022) Vol. 23, Iss. 4
Closed Access | Times Cited: 17
Deep profiling of gene expression across 18 human cancers
Wei Qiu, Ayse B. Dincer, Joseph D. Janizek, et al.
Nature Biomedical Engineering (2024)
Closed Access | Times Cited: 3
GGAECDA: Predicting circRNA-disease associations using graph autoencoder based on graph representation learning
Guanghui Li, Yawei Lin, Jiawei Luo, et al.
Computational Biology and Chemistry (2022) Vol. 99, pp. 107722-107722
Closed Access | Times Cited: 13
MDGF-MCEC: a multi-view dual attention embedding model with cooperative ensemble learning for CircRNA-disease association prediction
Qunzhuo Wu, Zhaohong Deng, Xiaoyong Pan, et al.
Briefings in Bioinformatics (2022) Vol. 23, Iss. 5
Closed Access | Times Cited: 13
ASCRB: Multi-view based attentional feature selection for CircRNA-binding site prediction
Lei Li, Zhigang Xue, Xiuquan Du
Computers in Biology and Medicine (2023) Vol. 162, pp. 107077-107077
Closed Access | Times Cited: 7
Progress in genome-wide identification of RBPs and their role in mitigating stresses, and growth in plants
Muhammad Haroon, Hala Tariq, Rabail Afzal, et al.
South African Journal of Botany (2023) Vol. 160, pp. 132-146
Closed Access | Times Cited: 6
New insights on circular RNAs and their potential applications as biomarkers, therapeutic agents, and preventive vaccines in viral infections: with a glance at SARS-CoV-2
Nasim Rahmani-Kukia, Ardeshir Abbasi
Molecular Therapy — Nucleic Acids (2022) Vol. 29, pp. 705-717
Open Access | Times Cited: 10
Characterization of circular RNAs with advanced sequencing technologies in human complex diseases
Hang Ruan, Peng‐Cheng Wang, Leng Han
Wiley Interdisciplinary Reviews - RNA (2022) Vol. 14, Iss. 1
Closed Access | Times Cited: 9
PseU-ST: A new stacked ensemble-learning method for identifying RNA pseudouridine sites
Xinru Zhang, Shutao Wang, Lina Xie, et al.
Frontiers in Genetics (2023) Vol. 14
Open Access | Times Cited: 5
CRBSP:Prediction of CircRNA-RBP Binding Sites Based on Multimodal Intermediate Fusion
Niannian Liu, Zequn Zhang, Yanan Wu, et al.
IEEE/ACM Transactions on Computational Biology and Bioinformatics (2023) Vol. 20, Iss. 5, pp. 2898-2906
Closed Access | Times Cited: 5
Extracellular vesicle-delivered hsa_circ_0090081 regulated by EIF4A3 enhances gastric cancer tumorigenesis
Yanjie Mou, Kun Lv
Cell Division (2024) Vol. 19, Iss. 1
Open Access | Times Cited: 1
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