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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Augmenting Microarray Data with Literature-Based Knowledge to Enhance Gene Regulatory Network Inference
Guocai Chen, Michael J. Cairelli, Halil Kilicoglu, et al.
PLoS Computational Biology (2014) Vol. 10, Iss. 6, pp. e1003666-e1003666
Open Access | Times Cited: 36

Showing 1-25 of 36 citing articles:

Drug repurposing for COVID-19 via knowledge graph completion
Rui Zhang, Dimitar Hristovski, Dalton Schutte, et al.
Journal of Biomedical Informatics (2021) Vol. 115, pp. 103696-103696
Open Access | Times Cited: 161
STCRDab: the structural T-cell receptor database
Jinwoo Leem, Saulo H. P. de Oliveira, Konrad Krawczyk, et al.
Nucleic Acids Research (2017) Vol. 46, Iss. D1, pp. D406-D412
Open Access | Times Cited: 100
Broad-coverage biomedical relation extraction with SemRep
Halil Kilicoglu, Graciela Rosemblat, Marcelo Fiszman, et al.
BMC Bioinformatics (2020) Vol. 21, Iss. 1
Open Access | Times Cited: 88
Biomedical text mining for research rigor and integrity: tasks, challenges, directions
Halil Kilicoglu
Briefings in Bioinformatics (2017)
Open Access | Times Cited: 57
Gene Network Reconstruction by Integration of Prior Biological Knowledge
Yupeng Li, Scott A. Jackson
G3 Genes Genomes Genetics (2015) Vol. 5, Iss. 6, pp. 1075-1079
Open Access | Times Cited: 50
Computational methods directed towards drug repurposing for COVID-19: advantages and limitations
Prem P. Sharma, Meenakshi Bansal, Aaftaab Sethi, et al.
RSC Advances (2021) Vol. 11, Iss. 57, pp. 36181-36198
Open Access | Times Cited: 28
Restructured GEO: restructuring Gene Expression Omnibus metadata for genome dynamics analysis
Guocai Chen, Juan Camilo Ramírez, Nan Deng, et al.
Database (2018) Vol. 2019
Open Access | Times Cited: 29
A Physical Mechanism and Global Quantification of Breast Cancer
Chong Yu, Jin Wang
PLoS ONE (2016) Vol. 11, Iss. 7, pp. e0157422-e0157422
Open Access | Times Cited: 24
KPP: KEGG Pathway Painter
Ganiraju C. Manyam, Aybike Birerdinc, Ancha Baranova
BMC Systems Biology (2015) Vol. 9, Iss. S2
Open Access | Times Cited: 23
Discovering New Genes in the Pathways of Common Sporadic Neurodegenerative Diseases: A Bioinformatics Approach
Yong Hwan Kim, Seung Han Beak, Andreas Charidimou, et al.
Journal of Alzheimer s Disease (2016) Vol. 51, Iss. 1, pp. 293-312
Closed Access | Times Cited: 20
LGscore: A method to identify disease-related genes using biological literature and Google data
Jeongwoo Kim, Hyunjin Kim, Youngmi Yoon, et al.
Journal of Biomedical Informatics (2015) Vol. 54, pp. 270-282
Open Access | Times Cited: 19
Networks of neuroinjury semantic predications to identify biomarkers for mild traumatic brain injury
Michael J. Cairelli, Marcelo Fiszman, Han Zhang, et al.
Journal of Biomedical Semantics (2015) Vol. 6, Iss. 1
Open Access | Times Cited: 17
A context-based ABC model for literature-based discovery
Yong Hwan Kim, Min Song
PLoS ONE (2019) Vol. 14, Iss. 4, pp. e0215313-e0215313
Open Access | Times Cited: 16
PLANT PHOSPHORUS USE EFFICIENCY IN ACID TROPICAL SOIL
MARIA JOSÉ VILAÇA DE VASCONCELOS, J. E. F. Figueiredo, MAURÍLIO FERNANDES DE OLIVEIRA, et al.
Revista Brasileira de Milho e Sorgo (2022) Vol. 21
Open Access | Times Cited: 8
Integrative Network-based Analysis of Colonic Detoxification Gene Expression in Ulcerative Colitis According to Smoking Status
Yong-Ping Ding, Yannick Ladeiro, Ian Morilla, et al.
Journal of Crohn s and Colitis (2016), pp. jjw179-jjw179
Open Access | Times Cited: 11
Navigating the Functional Landscape of Transcription Factors via Non-Negative Tensor Factorization Analysis of MEDLINE Abstracts
Sujoy Roy, Daqing Yun, Behrouz Madahian, et al.
Frontiers in Bioengineering and Biotechnology (2017) Vol. 5
Open Access | Times Cited: 11
Markov chain Monte Carlo simulation of a Bayesian mixture model for gene network inference
Younhee Ko, Jaebum Kim, Sandra L. Rodriguez‐Zas
Genes & Genomics (2019) Vol. 41, Iss. 5, pp. 547-555
Closed Access | Times Cited: 10
Combining gene expression data and prior knowledge for inferring gene regulatory networks via Bayesian networks using structural restrictions
Luis M. de Campos, Andrés Cano, Javier G. Castellano, et al.
Statistical Applications in Genetics and Molecular Biology (2019) Vol. 18, Iss. 3
Open Access | Times Cited: 9
RNDEtree: Regulatory Network With Differential Equation Based on Flexible Neural Tree With Novel Criterion Function
Bin Yang, Wenzheng Bao
IEEE Access (2019) Vol. 7, pp. 58255-58263
Open Access | Times Cited: 9
Boolean modeling techniques for protein co-expression networks in systems medicine
Gerhard Mayer, Katrin Marcus, Martin Eisenacher, et al.
Expert Review of Proteomics (2016) Vol. 13, Iss. 6, pp. 555-569
Closed Access | Times Cited: 5
PEAK: Integrating Curated and Noisy Prior Knowledge in Gene Regulatory Network Inference
Doaa Altarawy, Fatma-Elzahraa Eid, Lenwood S. Heath
Journal of Computational Biology (2017) Vol. 24, Iss. 9, pp. 863-873
Closed Access | Times Cited: 4
Gene fingerprint model for literature based detection of the associations among complex diseases: a case study of COPD
Guocai Chen, Yuxi Jia, Lisha Zhu, et al.
BMC Medical Informatics and Decision Making (2019) Vol. 19, Iss. S1
Open Access | Times Cited: 4
Data Integration for Microarrays: Enhanced Inference for Gene Regulatory Networks
Alina Sîrbu, Martin Crane, Heather J. Ruskin
Microarrays (2015) Vol. 4, Iss. 2, pp. 255-269
Open Access | Times Cited: 3
SPONGE: Simple Prior Omics Network GEnerator
Ladislav Hovan, Marieke L. Kuijjer
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access
Supervised EEG Source Imaging with Graph Regularization in Transformed Domain
Feng Liu, Jing Qin, Shouyi Wang, et al.
Lecture notes in computer science (2017), pp. 59-71
Closed Access | Times Cited: 3
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