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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Computational Prediction of Alanine Scanning and Ligand Binding Energetics in G-Protein Coupled Receptors
Lars Boukharta, Hugo Gutiérrez‐de‐Terán, Johan Åqvist
PLoS Computational Biology (2014) Vol. 10, Iss. 4, pp. e1003585-e1003585
Open Access | Times Cited: 64

Showing 1-25 of 64 citing articles:

fastDRH: a webserver to predict and analyze protein–ligand complexes based on molecular docking and MM/PB(GB)SA computation
Zhe Wang, Hong Pan, Huiyong Sun, et al.
Briefings in Bioinformatics (2022) Vol. 23, Iss. 5
Closed Access | Times Cited: 92
Free Energy Methods in Drug Design: Prospects of “Alchemical Perturbation” in Medicinal Chemistry
Billy J. Williams‐Noonan, Elizabeth Yuriev, David K. Chalmers
Journal of Medicinal Chemistry (2017) Vol. 61, Iss. 3, pp. 638-649
Closed Access | Times Cited: 153
Predicting Binding Affinities for GPCR Ligands Using Free-Energy Perturbation
Eelke B. Lenselink, Julien Louvel, Anna F. Forti, et al.
ACS Omega (2016) Vol. 1, Iss. 2, pp. 293-304
Open Access | Times Cited: 138
Advances in Molecular Dynamics Simulations and Enhanced Sampling Methods for the Study of Protein Systems
Raudah Lazim, Donghyuk Suh, Sun Choi
International Journal of Molecular Sciences (2020) Vol. 21, Iss. 17, pp. 6339-6339
Open Access | Times Cited: 137
History and Perspectives of A2AAdenosine Receptor Antagonists as Potential Therapeutic Agents
Delia Preti, Pier Giovanni Baraldi, Allan R. Moorman, et al.
Medicinal Research Reviews (2015) Vol. 35, Iss. 4, pp. 790-848
Open Access | Times Cited: 95
Predicting and Experimentally Validating Hot-Spot Residues at Protein–Protein Interfaces
Amaurys Ávila Ibarra, Gail J. Bartlett, Zsófia Hegedüs, et al.
ACS Chemical Biology (2019)
Open Access | Times Cited: 76
QligFEP: an automated workflow for small molecule free energy calculations in Q
Willem Jespers, Mauricio Esguerra, Johan Åqvist, et al.
Journal of Cheminformatics (2019) Vol. 11, Iss. 1
Open Access | Times Cited: 74
Recent advances in dynamic docking for drug discovery
Marco De Vivo, Andrea Cavalli
Wiley Interdisciplinary Reviews Computational Molecular Science (2017) Vol. 7, Iss. 6
Closed Access | Times Cited: 72
Q6: A comprehensive toolkit for empirical valence bond and related free energy calculations
Paul Bauer, Alexandre Barrozo, Miha Purg, et al.
SoftwareX (2018) Vol. 7, pp. 388-395
Open Access | Times Cited: 72
Relative Binding Free Energy Calculations Applied to Protein Homology Models
Daniel Cappel, Michelle Lynn Hall, Eelke B. Lenselink, et al.
Journal of Chemical Information and Modeling (2016) Vol. 56, Iss. 12, pp. 2388-2400
Open Access | Times Cited: 70
Fragment optimization for GPCRs by molecular dynamics free energy calculations: Probing druggable subpockets of the A 2A adenosine receptor binding site
Pierre Matricon, Anirudh Ranganathan, Eugene Warnick, et al.
Scientific Reports (2017) Vol. 7, Iss. 1
Open Access | Times Cited: 62
Biomolecular Modeling and Simulation: A Prospering Multidisciplinary Field
Tamar Schlick, Stephanie Portillo‐Ledesma, Christopher G. Myers, et al.
Annual Review of Biophysics (2021) Vol. 50, Iss. 1, pp. 267-301
Open Access | Times Cited: 50
SARS-CoV-2 nucleocapsid and Nsp3 binding: an in silico study
Muhammad Tahir Khan, Muhammad Tariq Zeb, Hina Ahsan, et al.
Archives of Microbiology (2020) Vol. 203, Iss. 1, pp. 59-66
Open Access | Times Cited: 49
Computational Study of Mycobacterium smegmatis Acyl Transferase Reaction Mechanism and Specificity
Masoud Kazemi, Xiang Sheng, Wolfgang Kroutil, et al.
ACS Catalysis (2018) Vol. 8, Iss. 11, pp. 10698-10706
Open Access | Times Cited: 48
Structural and Energetic Effects of A2A Adenosine Receptor Mutations on Agonist and Antagonist Binding
Henrik Keränen, Hugo Gutiérrez‐de‐Terán, Johan Åqvist
PLoS ONE (2014) Vol. 9, Iss. 10, pp. e108492-e108492
Open Access | Times Cited: 50
A Three‐Site Mechanism for Agonist/Antagonist Selective Binding to Vasopressin Receptors
Noureldin Saleh, Giorgio Saladino, Francesco Luigi Gervasio, et al.
Angewandte Chemie International Edition (2016) Vol. 55, Iss. 28, pp. 8008-8012
Open Access | Times Cited: 39
QresFEP: An Automated Protocol for Free Energy Calculations of Protein Mutations in Q
Willem Jespers, Geir Villy Isaksen, Tor Arne Heim Andberg, et al.
Journal of Chemical Theory and Computation (2019) Vol. 15, Iss. 10, pp. 5461-5473
Open Access | Times Cited: 38
Ligand and Residue Free Energy Perturbations Solve the Dual Binding Mode Proposal for an A2BAR Partial Agonist
Tana Tandarić, Hugo Gutiérrez‐de‐Terán
The Journal of Physical Chemistry B (2025)
Open Access
Free energy calculations of A2Aadenosine receptor mutation effects on agonist binding
Henrik Keränen, Johan Åqvist, Hugo Gutiérrez‐de‐Terán
Chemical Communications (2015) Vol. 51, Iss. 17, pp. 3522-3525
Closed Access | Times Cited: 35
Structure-Based Design of Potent and Selective Ligands at the Four Adenosine Receptors
Willem Jespers, Ana Oliveira, Rubén Prieto‐Díaz, et al.
Molecules (2017) Vol. 22, Iss. 11, pp. 1945-1945
Open Access | Times Cited: 35
Subtype-selective mechanisms of negative allosteric modulators binding to group I metabotropic glutamate receptors
Tingting Fu, Gao Tu, Ping Meng, et al.
Acta Pharmacologica Sinica (2020) Vol. 42, Iss. 8, pp. 1354-1367
Open Access | Times Cited: 31
X‐Ray Crystallography and Free Energy Calculations Reveal the Binding Mechanism of A2A Adenosine Receptor Antagonists
Willem Jespers, Grégory Verdon, Jhonny Azuaje, et al.
Angewandte Chemie International Edition (2020) Vol. 59, Iss. 38, pp. 16536-16543
Open Access | Times Cited: 30
Can molecular dynamics simulations improve the structural accuracy and virtual screening performance of GPCR models?
Jon Kapla, Ismael Rodríguez‐Espigares, Flavio Ballante, et al.
PLoS Computational Biology (2021) Vol. 17, Iss. 5, pp. e1008936-e1008936
Open Access | Times Cited: 26
Elucidation of the Binding Mode of the Carboxyterminal Region of Peptide YY to the Human Y2Receptor
Bo Xu, Silvana Vasile, Søren Østergaard, et al.
Molecular Pharmacology (2018) Vol. 93, Iss. 4, pp. 323-334
Open Access | Times Cited: 31
The GPR139 reference agonists 1a and 7c, and tryptophan and phenylalanine share a common binding site
Anne Cathrine Nøhr, Willem Jespers, Mohamed A. Shehata, et al.
Scientific Reports (2017) Vol. 7, Iss. 1
Open Access | Times Cited: 30
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