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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Nanopore sequencing of RNA and cDNA molecules in Escherichia coli
Felix Grünberger, Sébastien Ferreira-Cerca, Dina Grohmann
RNA (2021) Vol. 28, Iss. 3, pp. 400-417
Open Access | Times Cited: 69

Showing 1-25 of 69 citing articles:

Advances in nanopore direct RNA sequencing
Miten Jain, Robin Abu-Shumays, Hugh E. Olsen, et al.
Nature Methods (2022) Vol. 19, Iss. 10, pp. 1160-1164
Open Access | Times Cited: 116
Detection of Streptococcus pyogenes M1UK in Australia and characterization of the mutation driving enhanced expression of superantigen SpeA
Mark R. Davies, Nadia Keller, Stephan Brouwer, et al.
Nature Communications (2023) Vol. 14, Iss. 1
Open Access | Times Cited: 73
An Introduction to Nanopore Sequencing: Past, Present, and Future Considerations
Morgan MacKenzie, Christos Argyropoulos
Micromachines (2023) Vol. 14, Iss. 2, pp. 459-459
Open Access | Times Cited: 58
Co-transcriptional gene regulation in eukaryotes and prokaryotes
Morgan Shine, Jackson M. Gordon, Leonard Schärfen, et al.
Nature Reviews Molecular Cell Biology (2024) Vol. 25, Iss. 7, pp. 534-554
Closed Access | Times Cited: 24
Sequencing accuracy and systematic errors of nanopore direct RNA sequencing
Wang Liu-Wei, Wiep van der Toorn, Patrick Bohn, et al.
BMC Genomics (2024) Vol. 25, Iss. 1
Open Access | Times Cited: 19
Current concepts, advances, and challenges in deciphering the human microbiota with metatranscriptomics
Teija Ojala, Aino-Elina Häkkinen, Esko Kankuri, et al.
Trends in Genetics (2023) Vol. 39, Iss. 9, pp. 686-702
Open Access | Times Cited: 24
Nanopore sequencing: flourishing in its teenage years
Tianyuan Zhang, Hanzhou Li, Mian Jiang, et al.
Journal of genetics and genomics/Journal of Genetics and Genomics (2024)
Closed Access | Times Cited: 12
A systematic benchmark of Nanopore long-read RNA sequencing for transcript-level analysis in human cell lines
Ying Chen, N. Davidson, Yuk Kei Wan, et al.
Nature Methods (2025)
Open Access | Times Cited: 1
Transcriptome profiling for precision cancer medicine using shallow nanopore cDNA sequencing
Andreas Möck, Melissa Braun, Claudia Scholl, et al.
Scientific Reports (2023) Vol. 13, Iss. 1
Open Access | Times Cited: 16
Tail-tape-fused virion and non-virion RNA polymerases of a thermophilic virus with an extremely long tail
Anastasiia Chaban, Leonid Minakhin, Ekaterina Goldobina, et al.
Nature Communications (2024) Vol. 15, Iss. 1
Open Access | Times Cited: 7
Ubiquitous mRNA decay fragments in E. coli redefine the functional transcriptome
Lydia Herzel, Julian A. Stanley, Chun-Chen Yao, et al.
Nucleic Acids Research (2022) Vol. 50, Iss. 9, pp. 5029-5046
Open Access | Times Cited: 25
Refining the transcriptional landscapes for distinct clades of virulent phages infecting Pseudomonas aeruginosa
Leena Putzeys, Laura Wicke, Maarten Boon, et al.
microLife (2024) Vol. 5
Open Access | Times Cited: 5
The Applications of Nanopore Sequencing Technology in Animal and Human Virus Research
Chun-Miao Ji, Xiao-Yin Feng, Yao‐Wei Huang, et al.
Viruses (2024) Vol. 16, Iss. 5, pp. 798-798
Open Access | Times Cited: 5
Analysis of bacterial transcriptome and epitranscriptome using nanopore direct RNA sequencing
Lu Tan, Zhihao Guo, Yanwen Shao, et al.
Nucleic Acids Research (2024) Vol. 52, Iss. 15, pp. 8746-8762
Open Access | Times Cited: 5
Gene expression regulation and polyadenylation in ulcerative colitis via long-chain RNA sequencing
Zhe Zhang, Dan Li, Shihang Zheng, et al.
BMC Genomics (2025) Vol. 26, Iss. 1
Open Access
Application of Nanopore Long-Read Sequencing and Metabolomics in an in Vitro Dynamic Intestinal Digestion Model: A Genome-Centric Metatranscriptomic Approach to Investigating Microbial Tma and Scfa Metabolism
Carolina Simó, Maricruz Mamani‐Huanca, Oswaldo Hernández‐Hernández, et al.
(2025)
Closed Access
Automation of RNA-Seq Sample Preparation and Miniaturized Parallel Bioreactors Enable High-Throughput Differential Gene Expression Studies
Karlis Blums, Josha Herzog, José Sá da Costa, et al.
Microorganisms (2025) Vol. 13, Iss. 4, pp. 849-849
Open Access
An Introduction to Nanopore Sequencing: Past, Present, and Future Considerations
Morgan MacKenzie, Christos Argyropoulos
(2023)
Open Access | Times Cited: 12
Nanopore-based RNA sequencing deciphers the formation, processing, and modification steps of rRNA intermediates in archaea
Felix Grünberger, Michael Jüttner, Robert Knüppel, et al.
RNA (2023) Vol. 29, Iss. 8, pp. 1255-1273
Open Access | Times Cited: 12
Exploring the transcriptional landscape of phage–host interactions using novel high-throughput approaches
Leena Putzeys, Laura Wicke, Ana Brandão, et al.
Current Opinion in Microbiology (2024) Vol. 77, pp. 102419-102419
Open Access | Times Cited: 4
Methanotroph Methylotuvimicrobium alcaliphilum 20Z-3E as a fumarate producer: transcriptomic analysis and the role of malic enzyme
Olga N. Rozova, Sergey Y. But, Oleg I. Melnikov, et al.
International Microbiology (2025)
Closed Access
Direct RNA sequencing of the Escherichia coli epitranscriptome uncovers alterations under heat stress
Sebastián Riquelme-Barrios, Leonardo Vásquez-Camus, Siobhan A. Cusack, et al.
Nucleic Acids Research (2025) Vol. 53, Iss. 6
Open Access
RIBOSS detects novel translational events by combining long- and short-read transcriptome and translatome profiling
Chun Shen Lim, Alexandra K Gibbon, A. D. Nguyen, et al.
Briefings in Bioinformatics (2025) Vol. 26, Iss. 2
Open Access
Genome-wide Functional Characterization of Escherichia coli Promoters and Sequence Elements Encoding Their Regulation
Guillaume Urtecho, Kimberly D. Insigne, Arielle D. Tripp, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2020)
Open Access | Times Cited: 29
Profiling the polyadenylated transcriptome of extracellular vesicles with long-read nanopore sequencing
Juan-Carlos A. Padilla, Seda Barutcu, Ludovic Malet, et al.
BMC Genomics (2023) Vol. 24, Iss. 1
Open Access | Times Cited: 10
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