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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Tax4Fun2: prediction of habitat-specific functional profiles and functional redundancy based on 16S rRNA gene sequences
Franziska Wemheuer, Jessica A Taylor, Rolf Daniel, et al.
Environmental Microbiome (2020) Vol. 15, Iss. 1
Open Access | Times Cited: 462

Showing 1-25 of 462 citing articles:

PICRUSt2 for prediction of metagenome functions
Gavin M. Douglas, Vincent J. Maffei, Jesse Zaneveld, et al.
Nature Biotechnology (2020) Vol. 38, Iss. 6, pp. 685-688
Open Access | Times Cited: 3839
Soil plastispheres as hotspots of antibiotic resistance genes and potential pathogens
Dong Zhu, Jun Ma, Gang Li, et al.
The ISME Journal (2021) Vol. 16, Iss. 2, pp. 521-532
Open Access | Times Cited: 247
A High-Fat Diet Increases Gut Microbiota Biodiversity and Energy Expenditure Due to Nutrient Difference
Botao Wang, Qingmin Kong, Li Xiu, et al.
Nutrients (2020) Vol. 12, Iss. 10, pp. 3197-3197
Open Access | Times Cited: 236
Next-generation sequencing: insights to advance clinical investigations of the microbiome
Caroline R. Wensel, Jennifer L. Pluznick, Steven L. Salzberg, et al.
Journal of Clinical Investigation (2022) Vol. 132, Iss. 7
Open Access | Times Cited: 236
MicrobiomeAnalyst 2.0: comprehensive statistical, functional and integrative analysis of microbiome data
Yao Lü, Guangyan Zhou, Jessica Ewald, et al.
Nucleic Acids Research (2023) Vol. 51, Iss. W1, pp. W310-W318
Open Access | Times Cited: 223
Domestication of Oryza species eco-evolutionarily shapes bacterial and fungal communities in rice seed
Hyun Kim, Kiseok Keith Lee, Jongbum Jeon, et al.
Microbiome (2020) Vol. 8, Iss. 1
Open Access | Times Cited: 135
An Introduction to Next Generation Sequencing Bioinformatic Analysis in Gut Microbiome Studies
Bei Gao, Liang Chi, Yixin Zhu, et al.
Biomolecules (2021) Vol. 11, Iss. 4, pp. 530-530
Open Access | Times Cited: 98
ggpicrust2: an R package for PICRUSt2 predicted functional profile analysis and visualization
Yang Chen, Jiahao Mai, Xuan Cao, et al.
Bioinformatics (2023) Vol. 39, Iss. 8
Open Access | Times Cited: 94
Inferring microbiota functions from taxonomic genes: a review
Christophe Djemiel, Pierre‐Alain Maron, Sébastien Terrat, et al.
GigaScience (2022) Vol. 11
Open Access | Times Cited: 86
Soil properties, microbial diversity, and changes in the functionality of saline-alkali soil are driven by microplastics
Yingdan Yuan, Mengting Zu, Runze Li, et al.
Journal of Hazardous Materials (2023) Vol. 446, pp. 130712-130712
Closed Access | Times Cited: 62
The Skin Microbiome: Current Landscape and Future Opportunities
Paisleigh Smythe, Holly N. Wilkinson
International Journal of Molecular Sciences (2023) Vol. 24, Iss. 4, pp. 3950-3950
Open Access | Times Cited: 58
The best practice for microbiome analysis using R
Tao Wen, Guoqing Niu, Tong Chen, et al.
Protein & Cell (2023) Vol. 14, Iss. 10, pp. 713-725
Open Access | Times Cited: 51
The coral microbiome: towards an understanding of the molecular mechanisms of coral–microbiota interactions
Amin R. Mohamed, Michael A. Ochsenkühn, Ahmed M Kazlak, et al.
FEMS Microbiology Reviews (2023) Vol. 47, Iss. 2
Open Access | Times Cited: 39
Microplastics are detected in human gallstones and have the ability to form large cholesterol-microplastic heteroaggregates
Deyu Zhang, Chang Wu, Yue Liu, et al.
Journal of Hazardous Materials (2024) Vol. 467, pp. 133631-133631
Closed Access | Times Cited: 20
Oral bacteria accelerate pancreatic cancer development in mice
Elias S. Saba, Maria Farhat, Alaa Daoud, et al.
Gut (2024) Vol. 73, Iss. 5, pp. 770-786
Closed Access | Times Cited: 19
Enhanced biodegradation of microplastic and phthalic acid ester plasticizer: The role of gut microorganisms in black soldier fly larvae
Jiaqing Wang, Cuncheng Liu, Qingcheng Cao, et al.
The Science of The Total Environment (2024) Vol. 924, pp. 171674-171674
Closed Access | Times Cited: 14
On the limits of 16S rRNA gene-based metagenome prediction and functional profiling
Monica Steffi Matchado, Malte Rühlemann, Sandra Reitmeier, et al.
Microbial Genomics (2024) Vol. 10, Iss. 2
Open Access | Times Cited: 12
Diversity and biogeography of bacterial community in the Ili River network varies locally and regionally
Jun Geng, Weihong Zhang, Shuxin Liang, et al.
Water Research (2024) Vol. 256, pp. 121561-121561
Closed Access | Times Cited: 12
Stronger environmental adaptation of rare rather than abundant bacterioplankton in response to dredging in eutrophic Lake Nanhu (Wuhan, China)
Wenjie Wan, Hans‐Peter Grossart, Donglan He, et al.
Water Research (2020) Vol. 190, pp. 116751-116751
Closed Access | Times Cited: 112
Berry Polyphenols and Fibers Modulate Distinct Microbial Metabolic Functions and Gut Microbiota Enterotype-Like Clustering in Obese Mice
Maria-Carolina Rodríguez-Daza, Marcela Roquim, Stéphanie Dudonné, et al.
Frontiers in Microbiology (2020) Vol. 11
Open Access | Times Cited: 108
Comparative Analysis of 16S rRNA Gene and Metagenome Sequencing in Pediatric Gut Microbiomes
Danielle Peterson, Kevin S. Bonham, Sophie Rowland, et al.
Frontiers in Microbiology (2021) Vol. 12
Open Access | Times Cited: 88
Wastewater effluents cause microbial community shifts and change trophic status
Jamie Ruprecht, Simone C. Birrer, Katherine A. Dafforn, et al.
Water Research (2021) Vol. 200, pp. 117206-117206
Closed Access | Times Cited: 85
Temporal evolution of the microbiome, immune system, and epigenome with disease progression in ALS mice
Claudia Figueroa‐Romero, Kai Guo, Benjamin J. Murdock, et al.
Disease Models & Mechanisms (2019)
Open Access | Times Cited: 74
The dosage-effect of biochar on anaerobic digestion under the suppression of oily sludge: Performance variation, microbial community succession and potential detoxification mechanisms
Yongsen Shi, Manli Liu, Jingyi Li, et al.
Journal of Hazardous Materials (2021) Vol. 421, pp. 126819-126819
Closed Access | Times Cited: 72
Bacterial functional prediction tools detect but underestimate metabolic diversity compared to shotgun metagenomics in southwest Florida soils
David R. Toole, Jun Zhao, Willm Martens‐Habbena, et al.
Applied Soil Ecology (2021) Vol. 168, pp. 104129-104129
Closed Access | Times Cited: 67
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