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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

phasebook: haplotype-aware de novo assembly of diploid genomes from long reads
Xiao Luo, Xiongbin Kang, Alexander Schönhuth
Genome biology (2021) Vol. 22, Iss. 1
Open Access | Times Cited: 38

Showing 1-25 of 38 citing articles:

Haplotype-resolved assembly of diploid genomes without parental data
Haoyu Cheng, Erich D. Jarvis, Olivier Fédrigo, et al.
Nature Biotechnology (2022) Vol. 40, Iss. 9, pp. 1332-1335
Open Access | Times Cited: 359
DNA 5-methylcytosine detection and methylation phasing using PacBio circular consensus sequencing
Peng Ni, Fan Nie, Zeyu Zhong, et al.
Nature Communications (2023) Vol. 14, Iss. 1
Open Access | Times Cited: 45
Scalable telomere-to-telomere assembly for diploid and polyploid genomes with double graph
Haoyu Cheng, Mobin Asri, Julian Lucas, et al.
Nature Methods (2024) Vol. 21, Iss. 6, pp. 967-970
Closed Access | Times Cited: 39
Phased nanopore assembly with Shasta and modular graph phasing with GFAse
Ryan Lorig-Roach, Melissa Meredith, Jean Monlong, et al.
Genome Research (2024)
Open Access | Times Cited: 10
Rockfish: A transformer-based model for accurate 5-methylcytosine prediction from nanopore sequencing
Dominik Stanojević, Zhe Li, Sara Bakić, et al.
Nature Communications (2024) Vol. 15, Iss. 1
Open Access | Times Cited: 10
Comprehensive assessment of 11 de novo HiFi assemblers on complex eukaryotic genomes and metagenomes
Wenjuan Yu, Haohui Luo, Jinbao Yang, et al.
Genome Research (2024) Vol. 34, Iss. 2, pp. 326-340
Open Access | Times Cited: 8
Linear time complexity de novo long read genome assembly with GoldRush
Johnathan Wong, Lauren Coombe, Vladimir Nikolić, et al.
Nature Communications (2023) Vol. 14, Iss. 1
Open Access | Times Cited: 18
Advancements in HLA Typing Techniques and Their Impact on Transplantation Medicine
Jeethu Anu Geo, Reem Ameen, Salem Al Shemmari, et al.
Medical Principles and Practice (2024) Vol. 33, Iss. 3, pp. 215-231
Open Access | Times Cited: 6
Complex genome assembly based on long-read sequencing
Tianjiao Zhang, Jie Zhou, Wentao Gao, et al.
Briefings in Bioinformatics (2022) Vol. 23, Iss. 5
Closed Access | Times Cited: 20
Constructing telomere-to-telomere diploid genome by polishing haploid nanopore-based assembly
Joshua Casey Darian, Ritu Kundu, Ramesh Rajaby, et al.
Nature Methods (2024) Vol. 21, Iss. 4, pp. 574-583
Closed Access | Times Cited: 4
Phased nanopore assembly with Shasta and modular graph phasing with GFAse
Ryan Lorig-Roach, Melissa Meredith, Jean Monlong, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 9
VeChat: correcting errors in long reads using variation graphs
Xiao Luo, Xiongbin Kang, Alexander Schönhuth
Nature Communications (2022) Vol. 13, Iss. 1
Open Access | Times Cited: 15
DNA 5-methylcytosine detection and methylation phasing using PacBio circular consensus sequencing
Peng Ni, Zeyu Zhong, Jinrui Xu, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2022)
Open Access | Times Cited: 14
High functional allelic diversity and copy number in both MHC classes in the common buzzard
Jamie Winternitz, Nayden Chakarov, Tony Rinaud, et al.
BMC Ecology and Evolution (2023) Vol. 23, Iss. 1
Open Access | Times Cited: 7
Repeat and haplotype aware error correction in nanopore sequencing reads with DeChat
Yichen Li, Enlian Chen, Jialu Xu, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 2
The blooming of long-read sequencing reforms biomedical research
Kin Fai Au
Genome biology (2022) Vol. 23, Iss. 1
Open Access | Times Cited: 12
142 telomere-to-telomere assemblies reveal the genome structural landscape inSaccharomyces cerevisiae
Samuel O’Donnell, Jia‐Xing Yue, Omar Abou Saada, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2022)
Open Access | Times Cited: 11
Enhancing Long-Read-Based Strain-Aware Metagenome Assembly
Xiao Luo, Xiongbin Kang, Alexander Schönhuth
Frontiers in Genetics (2022) Vol. 13
Open Access | Times Cited: 9
Phasing Diploid Genome Assembly Graphs with Single-Cell Strand Sequencing
Mir Henglin, Maryam Ghareghani, William T. Harvey, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 1
KSNP: a fast de Bruijn graph-based haplotyping tool approaching data-in time cost
Qian Zhou, Fahu Ji, Dongxiao Lin, et al.
Nature Communications (2024) Vol. 15, Iss. 1
Open Access | Times Cited: 1
Generating barcodes for nanopore sequencing data with PRO
Ting Yu, Zitong Ren, Xin Gao, et al.
Fundamental Research (2024) Vol. 4, Iss. 4, pp. 785-794
Open Access | Times Cited: 1
GCphase: an SNP phasing method using a graph partition and error correction algorithm
Junwei Luo, Jiayi Wang, Haixia Zhai, et al.
BMC Bioinformatics (2024) Vol. 25, Iss. 1
Open Access | Times Cited: 1
Graphasing: phasing diploid genome assembly graphs with single-cell strand sequencing
Mir Henglin, Maryam Ghareghani, William T. Harvey, et al.
Genome biology (2024) Vol. 25, Iss. 1
Open Access | Times Cited: 1
A pan-MHC reference graph with 246 fully contiguous phased sequences
Liza Huijse, Solomon M. Adams, Joshua N. Burton, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 3
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