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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Eleven grand challenges in single-cell data science
David Lähnemann, Johannes Köster, Ewa Szczurek, et al.
Genome biology (2020) Vol. 21, Iss. 1
Open Access | Times Cited: 990

Showing 1-25 of 990 citing articles:

Deciphering cell–cell interactions and communication from gene expression
Erick Armingol, Adam Officer, Olivier Harismendy, et al.
Nature Reviews Genetics (2020) Vol. 22, Iss. 2, pp. 71-88
Open Access | Times Cited: 853
Benchmarking atlas-level data integration in single-cell genomics
Malte D. Luecken, Maren Büttner, Kridsadakorn Chaichoompu, et al.
Nature Methods (2021) Vol. 19, Iss. 1, pp. 41-50
Open Access | Times Cited: 719
scMC learns biological variation through the alignment of multiple single-cell genomics datasets
Lihua Zhang, Qing Nie
Genome biology (2021) Vol. 22, Iss. 1
Open Access | Times Cited: 643
Deep learning and alignment of spatially resolved single-cell transcriptomes with Tangram
Tommaso Biancalani, Gabriele Scalia, Lorenzo Buffoni, et al.
Nature Methods (2021) Vol. 18, Iss. 11, pp. 1352-1362
Open Access | Times Cited: 472
From GWAS to Function: Using Functional Genomics to Identify the Mechanisms Underlying Complex Diseases
Eddie Cano-Gamez, Gosia Trynka
Frontiers in Genetics (2020) Vol. 11
Open Access | Times Cited: 454
Best practices for single-cell analysis across modalities
Lukas Heumos, Anna C. Schaar, Christopher Lance, et al.
Nature Reviews Genetics (2023) Vol. 24, Iss. 8, pp. 550-572
Open Access | Times Cited: 427
Statistics or biology: the zero-inflation controversy about scRNA-seq data
Ruochen Jiang, Tianyi Sun, Dongyuan Song, et al.
Genome biology (2022) Vol. 23, Iss. 1
Open Access | Times Cited: 424
Ultra‐high sensitivity mass spectrometry quantifies single‐cell proteome changes upon perturbation
Andreas‐David Brunner, Marvin Thielert, Catherine G. Vasilopoulou, et al.
Molecular Systems Biology (2022) Vol. 18, Iss. 3
Open Access | Times Cited: 391
A new gene set identifies senescent cells and predicts senescence-associated pathways across tissues
Dominik Saul, Robyn Laura Kosinsky, Elizabeth J. Atkinson, et al.
Nature Communications (2022) Vol. 13, Iss. 1
Open Access | Times Cited: 383
Interpretation of T cell states from single-cell transcriptomics data using reference atlases
Massimo Andreatta, Jesús Corría-Osorio, Sören Müller, et al.
Nature Communications (2021) Vol. 12, Iss. 1
Open Access | Times Cited: 330
Computational principles and challenges in single-cell data integration
Ricard Argelaguet, Anna Cuomo, Oliver Stegle, et al.
Nature Biotechnology (2021) Vol. 39, Iss. 10, pp. 1202-1215
Closed Access | Times Cited: 311
stLearn: integrating spatial location, tissue morphology and gene expression to find cell types, cell-cell interactions and spatial trajectories within undissociated tissues
Duy Pham, Xiao Tan, Jun Xu, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2020)
Open Access | Times Cited: 300
Dissection of artifactual and confounding glial signatures by single-cell sequencing of mouse and human brain
Samuel E. Marsh, Alec J. Walker, Tushar Kamath, et al.
Nature Neuroscience (2022) Vol. 25, Iss. 3, pp. 306-316
Open Access | Times Cited: 255
Nasal ciliated cells are primary targets for SARS-CoV-2 replication in the early stage of COVID-19
Ji Hoon Ahn, JungMo Kim, Seon Pyo Hong, et al.
Journal of Clinical Investigation (2021) Vol. 131, Iss. 13
Open Access | Times Cited: 239
A systematic evaluation of single-cell RNA-sequencing imputation methods
Wenpin Hou, Zhicheng Ji, Hongkai Ji, et al.
Genome biology (2020) Vol. 21, Iss. 1
Open Access | Times Cited: 232
Single‐cell RNA sequencing in cancer research
Yijie Zhang, Dan Wang, Peng Miao, et al.
Journal of Experimental & Clinical Cancer Research (2021) Vol. 40, Iss. 1
Open Access | Times Cited: 227
Mapping the immune environment in clear cell renal carcinoma by single-cell genomics
Nicholas Borcherding, Ajaykumar Vishwakarma, Andrew P. Voigt, et al.
Communications Biology (2021) Vol. 4, Iss. 1
Open Access | Times Cited: 222
A guide for the diagnosis of rare and undiagnosed disease: beyond the exome
Shruti Marwaha, Joshua W. Knowles, Euan A. Ashley
Genome Medicine (2022) Vol. 14, Iss. 1
Open Access | Times Cited: 198
Applying high-dimensional single-cell technologies to the analysis of cancer immunotherapy
Satyen H. Gohil, J. Bryan Iorgulescu, David A. Braun, et al.
Nature Reviews Clinical Oncology (2020) Vol. 18, Iss. 4, pp. 244-256
Open Access | Times Cited: 196
A harmonized atlas of mouse spinal cord cell types and their spatial organization
D. Russ, Ryan B. Patterson Cross, Li Li, et al.
Nature Communications (2021) Vol. 12, Iss. 1
Open Access | Times Cited: 172
Biomarkers of aging
Hainan Bao, Jiani Cao, Mengting Chen, et al.
Science China Life Sciences (2023) Vol. 66, Iss. 5, pp. 893-1066
Open Access | Times Cited: 169
Applications of single-cell RNA sequencing in drug discovery and development
Bram Van de Sande, Joon Sang Lee, Euphemia Mutasa-Gottgens, et al.
Nature Reviews Drug Discovery (2023) Vol. 22, Iss. 6, pp. 496-520
Open Access | Times Cited: 162
Macrophages and microglia in glioblastoma: heterogeneity, plasticity, and therapy
Fatima Khan, Lizhi Pang, Madeline Dunterman, et al.
Journal of Clinical Investigation (2023) Vol. 133, Iss. 1
Open Access | Times Cited: 157
Gene regulatory network inference in the era of single-cell multi-omics
Pau Badia-i-Mompel, Lorna Wessels, Sophia Müller‐Dott, et al.
Nature Reviews Genetics (2023) Vol. 24, Iss. 11, pp. 739-754
Closed Access | Times Cited: 155
Efficient and precise single-cell reference atlas mapping with Symphony
Joyce B. Kang, Aparna Nathan, Kathryn Weinand, et al.
Nature Communications (2021) Vol. 12, Iss. 1
Open Access | Times Cited: 153
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