OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!
If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.
Requested Article:
To denoise or to cluster, that is not the question: optimizing pipelines for COI metabarcoding and metaphylogeography
Adrià Antich, Creu Palacín, Owen S. Wangensteen, et al.
BMC Bioinformatics (2021) Vol. 22, Iss. 1
Open Access | Times Cited: 110
Adrià Antich, Creu Palacín, Owen S. Wangensteen, et al.
BMC Bioinformatics (2021) Vol. 22, Iss. 1
Open Access | Times Cited: 110
Showing 1-25 of 110 citing articles:
Best practices in metabarcoding of fungi: From experimental design to results
Leho Tedersoo, Mohammad Bahram, Lucie Zinger, et al.
Molecular Ecology (2022) Vol. 31, Iss. 10, pp. 2769-2795
Open Access | Times Cited: 186
Leho Tedersoo, Mohammad Bahram, Lucie Zinger, et al.
Molecular Ecology (2022) Vol. 31, Iss. 10, pp. 2769-2795
Open Access | Times Cited: 186
Airborne environmental DNA for terrestrial vertebrate community monitoring
Christina Lynggaard, Mads F. Bertelsen, Casper Vindahl Jensen, et al.
Current Biology (2022) Vol. 32, Iss. 3, pp. 701-707.e5
Open Access | Times Cited: 166
Christina Lynggaard, Mads F. Bertelsen, Casper Vindahl Jensen, et al.
Current Biology (2022) Vol. 32, Iss. 3, pp. 701-707.e5
Open Access | Times Cited: 166
Multi-omic approaches for host-microbiome data integration
Ashwin Chetty, Ran Blekhman
Gut Microbes (2024) Vol. 16, Iss. 1
Open Access | Times Cited: 20
Ashwin Chetty, Ran Blekhman
Gut Microbes (2024) Vol. 16, Iss. 1
Open Access | Times Cited: 20
A pile of pipelines: An overview of the bioinformatics software for metabarcoding data analyses
Ali Hakimzadeh, Alejandro Abdala Asbun, Davide Albanese, et al.
Molecular Ecology Resources (2023) Vol. 24, Iss. 5
Open Access | Times Cited: 41
Ali Hakimzadeh, Alejandro Abdala Asbun, Davide Albanese, et al.
Molecular Ecology Resources (2023) Vol. 24, Iss. 5
Open Access | Times Cited: 41
Soundscapes and deep learning enable tracking biodiversity recovery in tropical forests
Jörg Müller, Oliver Mitesser, H. Martin Schaefer, et al.
Nature Communications (2023) Vol. 14, Iss. 1
Open Access | Times Cited: 37
Jörg Müller, Oliver Mitesser, H. Martin Schaefer, et al.
Nature Communications (2023) Vol. 14, Iss. 1
Open Access | Times Cited: 37
Detecting and analysing intraspecific genetic variation with eDNA : From population genetics to species abundance
Kara J. Andres, David M. Lodge, Suresh A. Sethi, et al.
Molecular Ecology (2023) Vol. 32, Iss. 15, pp. 4118-4132
Open Access | Times Cited: 25
Kara J. Andres, David M. Lodge, Suresh A. Sethi, et al.
Molecular Ecology (2023) Vol. 32, Iss. 15, pp. 4118-4132
Open Access | Times Cited: 25
DNA Metabarcoding Methods for the Study of Marine Benthic Meiofauna: A Review
Romy Gielings, Maria Fais, Diego Fontaneto, et al.
Frontiers in Marine Science (2021) Vol. 8
Open Access | Times Cited: 47
Romy Gielings, Maria Fais, Diego Fontaneto, et al.
Frontiers in Marine Science (2021) Vol. 8
Open Access | Times Cited: 47
MetaWorks: A flexible, scalable bioinformatic pipeline for high-throughput multi-marker biodiversity assessments
Teresita M. Porter, Mehrdad Hajibabaei
PLoS ONE (2022) Vol. 17, Iss. 9, pp. e0274260-e0274260
Open Access | Times Cited: 32
Teresita M. Porter, Mehrdad Hajibabaei
PLoS ONE (2022) Vol. 17, Iss. 9, pp. e0274260-e0274260
Open Access | Times Cited: 32
Optimal sequence similarity thresholds for clustering of molecular operational taxonomic units inDNA metabarcoding studies
Aurélie Bonin, Alessia Guerrieri, Gentile Francesco Ficetola
Molecular Ecology Resources (2022) Vol. 23, Iss. 2, pp. 368-381
Open Access | Times Cited: 30
Aurélie Bonin, Alessia Guerrieri, Gentile Francesco Ficetola
Molecular Ecology Resources (2022) Vol. 23, Iss. 2, pp. 368-381
Open Access | Times Cited: 30
A manager’s guide to using eDNA metabarcoding in marine ecosystems
Zachary Gold, Adam Wall, Teia M. Schweizer, et al.
PeerJ (2022) Vol. 10, pp. e14071-e14071
Open Access | Times Cited: 29
Zachary Gold, Adam Wall, Teia M. Schweizer, et al.
PeerJ (2022) Vol. 10, pp. e14071-e14071
Open Access | Times Cited: 29
Coming of age for COI metabarcoding of whole organism community DNA: Towards bioinformatic harmonisation
Thomas J. Creedy, Carmelo Andújar, Emmanouil Meramveliotakis, et al.
Molecular Ecology Resources (2021) Vol. 22, Iss. 3, pp. 847-861
Open Access | Times Cited: 39
Thomas J. Creedy, Carmelo Andújar, Emmanouil Meramveliotakis, et al.
Molecular Ecology Resources (2021) Vol. 22, Iss. 3, pp. 847-861
Open Access | Times Cited: 39
Profile hidden Markov model sequence analysis can help remove putative pseudogenes from DNA barcoding and metabarcoding datasets
Teresita M. Porter, Mehrdad Hajibabaei
BMC Bioinformatics (2021) Vol. 22, Iss. 1
Open Access | Times Cited: 33
Teresita M. Porter, Mehrdad Hajibabaei
BMC Bioinformatics (2021) Vol. 22, Iss. 1
Open Access | Times Cited: 33
Accumulation and diversity of airborne, eukaryotic environmental DNA
Martin Johannesen Klepke, Eva Egelyng Sigsgaard, Mads Reinholdt Jensen, et al.
Environmental DNA (2022) Vol. 4, Iss. 6, pp. 1323-1339
Open Access | Times Cited: 27
Martin Johannesen Klepke, Eva Egelyng Sigsgaard, Mads Reinholdt Jensen, et al.
Environmental DNA (2022) Vol. 4, Iss. 6, pp. 1323-1339
Open Access | Times Cited: 27
Kadri Runnel, Kessy Abarenkov, Ovidiu Copoţ, et al.
Molecular Ecology Resources (2022) Vol. 22, Iss. 8, pp. 2871-2879
Closed Access | Times Cited: 25
Framing Cutting-Edge Integrative Deep-Sea Biodiversity Monitoring via Environmental DNA and Optoacoustic Augmented Infrastructures
Sérgio Stefanni, Luca Mirimin, David Stanković, et al.
Frontiers in Marine Science (2022) Vol. 8
Open Access | Times Cited: 23
Sérgio Stefanni, Luca Mirimin, David Stanković, et al.
Frontiers in Marine Science (2022) Vol. 8
Open Access | Times Cited: 23
VTAM: A robust pipeline for validating metabarcoding data using controls
Aitor González, Vincent Dubut, Emmanuel Corse, et al.
Computational and Structural Biotechnology Journal (2023) Vol. 21, pp. 1151-1156
Open Access | Times Cited: 13
Aitor González, Vincent Dubut, Emmanuel Corse, et al.
Computational and Structural Biotechnology Journal (2023) Vol. 21, pp. 1151-1156
Open Access | Times Cited: 13
Environmental DNA metabarcoding serves as a promising method for aquatic species monitoring and management: A review focused on its workflow, applications, challenges and prospects
Miaolian Zhang, Yingtong Zou, Shan Xiao, et al.
Marine Pollution Bulletin (2023) Vol. 194, pp. 115430-115430
Closed Access | Times Cited: 13
Miaolian Zhang, Yingtong Zou, Shan Xiao, et al.
Marine Pollution Bulletin (2023) Vol. 194, pp. 115430-115430
Closed Access | Times Cited: 13
The critical role of natural history museums in advancing eDNA for biodiversity studies: a case study with Amazonian fishes
Carlos David de Santana, Lynne R. Parenti, Casey B. Dillman, et al.
Scientific Reports (2021) Vol. 11, Iss. 1
Open Access | Times Cited: 29
Carlos David de Santana, Lynne R. Parenti, Casey B. Dillman, et al.
Scientific Reports (2021) Vol. 11, Iss. 1
Open Access | Times Cited: 29
Mitochondrial Cytochrome Oxidase Subunit 1: A Promising Molecular Marker for Species Identification in Foraminifera
Elsa B. Girard, Anouk Langerak, Jamaluddin Jompa, et al.
Frontiers in Marine Science (2022) Vol. 9
Open Access | Times Cited: 22
Elsa B. Girard, Anouk Langerak, Jamaluddin Jompa, et al.
Frontiers in Marine Science (2022) Vol. 9
Open Access | Times Cited: 22
Preliminary characterization of coral reef diversity using environmental DNA in a hyper-diverse context
Elaine W. Shen, Erin M. Borbee, Paul G. Carvalho, et al.
Regional Studies in Marine Science (2024) Vol. 71, pp. 103432-103432
Closed Access | Times Cited: 4
Elaine W. Shen, Erin M. Borbee, Paul G. Carvalho, et al.
Regional Studies in Marine Science (2024) Vol. 71, pp. 103432-103432
Closed Access | Times Cited: 4
Soil invertebrate biodiversity and functionality within the intensively farmed areas of the Po Valley
Matteo Brunetti, Giulia Magoga, Alex Cussigh, et al.
Applied Soil Ecology (2024) Vol. 197, pp. 105326-105326
Open Access | Times Cited: 4
Matteo Brunetti, Giulia Magoga, Alex Cussigh, et al.
Applied Soil Ecology (2024) Vol. 197, pp. 105326-105326
Open Access | Times Cited: 4
Detecting the invisible through DNA metabarcoding: The role of gelatinous taxa in the diet of two demersal Antarctic key stone fish species (Notothenioidei)
Micaela Ruiz, Eugenia Moreira, Manuel Novillo, et al.
Environmental DNA (2024) Vol. 6, Iss. 3
Closed Access | Times Cited: 4
Micaela Ruiz, Eugenia Moreira, Manuel Novillo, et al.
Environmental DNA (2024) Vol. 6, Iss. 3
Closed Access | Times Cited: 4
Investigating pelagic biodiversity and gelatinous zooplankton communities in the rapidly changing European Arctic: An eDNA metabarcoding survey
Ayla Murray, Taylor Priest, Adrià Antich, et al.
Environmental DNA (2024) Vol. 6, Iss. 3
Open Access | Times Cited: 4
Ayla Murray, Taylor Priest, Adrià Antich, et al.
Environmental DNA (2024) Vol. 6, Iss. 3
Open Access | Times Cited: 4
Seasonality of primary production explains the richness of pioneering benthic communities
Matteo Cecchetto, Agnès Dettaı̈, Cyril Gallut, et al.
Nature Communications (2024) Vol. 15, Iss. 1
Open Access | Times Cited: 4
Matteo Cecchetto, Agnès Dettaı̈, Cyril Gallut, et al.
Nature Communications (2024) Vol. 15, Iss. 1
Open Access | Times Cited: 4
