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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Interpreting transcriptional changes using causal graphs: new methods and their practical utility on public networks
Carl Tony Fakhry, Parul Choudhary, Alex Gutteridge, et al.
BMC Bioinformatics (2016) Vol. 17, Iss. 1
Open Access | Times Cited: 37

Showing 1-25 of 37 citing articles:

Community assessment to advance computational prediction of cancer drug combinations in a pharmacogenomic screen
Michael P. Menden, Dennis Wang, Mike J. Mason, et al.
Nature Communications (2019) Vol. 10, Iss. 1
Open Access | Times Cited: 301
Adenosine Signaling Is Prognostic for Cancer Outcome and Has Predictive Utility for Immunotherapeutic Response
Ben Sidders, Pei Zhang, Kelly Goodwin, et al.
Clinical Cancer Research (2020) Vol. 26, Iss. 9, pp. 2176-2187
Closed Access | Times Cited: 75
E7386, a Selective Inhibitor of the Interaction between β-Catenin and CBP, Exerts Antitumor Activity in Tumor Models with Activated Canonical Wnt Signaling
Kazuhiko Yamada, Yusaku Hori, Satoshi Inoue, et al.
Cancer Research (2021) Vol. 81, Iss. 4, pp. 1052-1062
Open Access | Times Cited: 43
Network-Based Drug Discovery: Coupling Network Pharmacology with Phenotypic Screening for Neuronal Excitability
Ben S. Sidders, Anna Karlsson, Linda Kitching, et al.
Journal of Molecular Biology (2018) Vol. 430, Iss. 18, pp. 3005-3015
Closed Access | Times Cited: 50
Transcriptional Responses of In Vitro Blood–Brain Barrier Models to Shear Stress
Koji L. Foreman, Benjamin D. Gastfriend, Moriah E. Katt, et al.
Biomolecules (2025) Vol. 15, Iss. 2, pp. 193-193
Open Access
Mitotane activates ATF4/ATF3 axis triggering endoplasmic reticulum stress in adrenocortical carcinoma cells
Aurora Schiavon, L. Saba, Carlotta Evaristo, et al.
Biomedicine & Pharmacotherapy (2025) Vol. 184, pp. 117917-117917
Closed Access
Curcumin downregulates expression of opioid-related nociceptin receptor gene (OPRL1) in isolated neuroglia cells
Ean‐Jeong Seo, Thomas Efferth, Alexander Panossian
Phytomedicine (2018) Vol. 50, pp. 285-299
Open Access | Times Cited: 39
Shared Gene Targets of the ATF4 and p53 Transcriptional Networks
Gabriele Baniulyte, Serene A. Durham, Lauren E. Merchant, et al.
Molecular and Cellular Biology (2023) Vol. 43, Iss. 8, pp. 426-449
Open Access | Times Cited: 11
A biological network-based regularized artificial neural network model for robust phenotype prediction from gene expression data
Tianyu Kang, Wei Ding, Luoyan Zhang, et al.
BMC Bioinformatics (2017) Vol. 18, Iss. 1
Open Access | Times Cited: 39
A cancer pharmacogenomic screen powering crowd-sourced advancement of drug combination prediction
Michael P. Menden, Dennis Wang, Yuanfang Guan, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2017)
Open Access | Times Cited: 33
Long non-coding RNA PCAT19 safeguards DNA in quiescent endothelial cells by preventing uncontrolled phosphorylation of RPA2
James A. Oo, Katalin Pálfi, Timothy Warwick, et al.
Cell Reports (2022) Vol. 41, Iss. 7, pp. 111670-111670
Open Access | Times Cited: 16
Community assessment of cancer drug combination screens identifies strategies for synergy prediction
Michael P. Menden, Dennis Wang, Yuanfang Guan, et al.
(2017), pp. 200451
Open Access | Times Cited: 29
Non-Coding RNAs in the Brain-Heart Axis: The Case of Parkinson’s Disease
Shubhra Acharya, Antonio Salgado‐Somoza, Francesca Maria Stefanizzi, et al.
International Journal of Molecular Sciences (2020) Vol. 21, Iss. 18, pp. 6513-6513
Open Access | Times Cited: 26
Computational systems biology approaches for Parkinson’s disease
Enrico Glaab
Cell and Tissue Research (2017) Vol. 373, Iss. 1, pp. 91-109
Open Access | Times Cited: 24
Robust phenotype prediction from gene expression data using differential shrinkage of co-regulated genes
Kourosh Zarringhalam, David Degras, Christoph Brockel, et al.
Scientific Reports (2018) Vol. 8, Iss. 1
Open Access | Times Cited: 22
Hearing impairment due to Mir183/96/182 mutations suggests both loss-of-function and gain-of-function effects
Morag A. Lewis, Francesca Di Domenico, Neil J. Ingham, et al.
Disease Models & Mechanisms (2020) Vol. 14, Iss. 2
Open Access | Times Cited: 20
Network Pharmacology of Ginseng (Part II): The Differential Effects of Red Ginseng and Ginsenoside Rg5 in Cancer and Heart Diseases as Determined by Transcriptomics
Alexander Panossian, Sara Abdelfatah, Thomas Efferth
Pharmaceuticals (2021) Vol. 14, Iss. 10, pp. 1010-1010
Open Access | Times Cited: 17
ChemPert: mapping between chemical perturbation and transcriptional response for non-cancer cells
Menglin Zheng, Satoshi Okawa, Miren Bravo, et al.
Nucleic Acids Research (2022) Vol. 51, Iss. D1, pp. D877-D889
Open Access | Times Cited: 12
Identifying molecular and functional similarities and differences between human primary cardiac valve interstitial cells and ventricular fibroblasts
Martha E. Floy, Fathima Shabnam, Sophie Givens, et al.
Frontiers in Bioengineering and Biotechnology (2023) Vol. 11
Open Access | Times Cited: 5
Delivering Robust Candidates to the Drug Pipeline through Computational Analysis of Arrayed CRISPR Screens
Maria Luisa Guerriero, Adam Corrigan, Aurélie Bornot, et al.
SLAS DISCOVERY (2020) Vol. 25, Iss. 6, pp. 646-654
Open Access | Times Cited: 12
Network Pharmacology of Ginseng (Part II): The Differential Effects of Red Ginseng and Ginsenoside Rg5 in Cancer and Heart Diseases as Determined by Transcriptomics
Alexander Panossian, Sara Abdelfatah, Thomas Efferth
(2021)
Open Access | Times Cited: 11
Network Pharmacology of Red Ginseng (Part I): Effects of Ginsenoside Rg5 at Physiological and Sub-Physiological Concentrations
Alexander Panossian, Sara Abdelfatah, Thomas Efferth
Pharmaceuticals (2021) Vol. 14, Iss. 10, pp. 999-999
Open Access | Times Cited: 10
Causal Inference Engine: a platform for directional gene set enrichment analysis and inference of active transcriptional regulators
Saman Farahmand, Corey O’Connor, Jill A. Macoska, et al.
Nucleic Acids Research (2019)
Open Access | Times Cited: 10
ModEx: A text mining system for extracting mode of regulation of transcription factor-gene regulatory interaction
Saman Farahmand, Todd Riley, Kourosh Zarringhalam
Journal of Biomedical Informatics (2019) Vol. 102, pp. 103353-103353
Open Access | Times Cited: 10
Network Pharmacology of Ginseng (Part III): Antitumor Potential of a Fixed Combination of Red Ginseng and Red Sage as Determined by Transcriptomics
Alexander Panossian, Sara Abdelfatah, Thomas Efferth
Pharmaceuticals (2022) Vol. 15, Iss. 11, pp. 1345-1345
Open Access | Times Cited: 6
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