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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Predicting RNA-Protein Interactions Using Only Sequence Information
Usha Muppirala, Vasant Honavar, Drena Dobbs
BMC Bioinformatics (2011) Vol. 12, Iss. 1
Open Access | Times Cited: 467

Showing 1-25 of 467 citing articles:

Circular non-coding RNA ANRIL modulates ribosomal RNA maturation and atherosclerosis in humans
Lesca M. Holdt, Anika Stahringer, Kristina Sass, et al.
Nature Communications (2016) Vol. 7, Iss. 1
Open Access | Times Cited: 966
How RNA-Binding Proteins Interact with RNA: Molecules and Mechanisms
Meredith Corley, Margaret C. Burns, G Yeo
Molecular Cell (2020) Vol. 78, Iss. 1, pp. 9-29
Open Access | Times Cited: 609
Revealing protein–lncRNA interaction
Fabrizio Ferrè, Alessio Colantoni, Manuela Helmer‐Citterich
Briefings in Bioinformatics (2015) Vol. 17, Iss. 1, pp. 106-116
Open Access | Times Cited: 606
LincRNA-p21 Regulates Neointima Formation, Vascular Smooth Muscle Cell Proliferation, Apoptosis, and Atherosclerosis by Enhancing p53 Activity
Gengze Wu, Jin Cai, Yu Han, et al.
Circulation (2014) Vol. 130, Iss. 17, pp. 1452-1465
Open Access | Times Cited: 462
The RIDL hypothesis: transposable elements as functional domains of long noncoding RNAs
Rory Johnson, Roderic Guigó
RNA (2014) Vol. 20, Iss. 7, pp. 959-976
Open Access | Times Cited: 296
LncRNA PVT1 promotes gemcitabine resistance of pancreatic cancer via activating Wnt/β-catenin and autophagy pathway through modulating the miR-619-5p/Pygo2 and miR-619-5p/ATG14 axes
Cefan Zhou, Changhua Yi, Yongxiang Yi, et al.
Molecular Cancer (2020) Vol. 19, Iss. 1
Open Access | Times Cited: 295
catRAPID omics: a web server for large-scale prediction of protein–RNA interactions
Federico Agostini, Andreas Zanzoni, Petr Klus, et al.
Bioinformatics (2013) Vol. 29, Iss. 22, pp. 2928-2930
Open Access | Times Cited: 262
The long noncoding RNA SNHG1 regulates colorectal cancer cell growth through interactions with EZH2 and miR-154-5p
Mu Xu, Xiaoxiang Chen, Lin Kang, et al.
Molecular Cancer (2018) Vol. 17, Iss. 1
Open Access | Times Cited: 261
Long Noncoding RNA PVT1 Promotes Non–Small Cell Lung Cancer Cell Proliferation through Epigenetically Regulating LATS2 Expression
Li Wan, Ming Sun, Guo‐Jian Liu, et al.
Molecular Cancer Therapeutics (2016) Vol. 15, Iss. 5, pp. 1082-1094
Open Access | Times Cited: 209
RPI-Pred: predicting ncRNA-protein interaction using sequence and structural information
V. Suresh, Liang Liu, Donald Adjeroh, et al.
Nucleic Acids Research (2015) Vol. 43, Iss. 3, pp. 1370-1379
Open Access | Times Cited: 182
ACP-DL: A Deep Learning Long Short-Term Memory Model to Predict Anticancer Peptides Using High-Efficiency Feature Representation
Hai-Cheng Yi, Zhu‐Hong You, Xi Zhou, et al.
Molecular Therapy — Nucleic Acids (2019) Vol. 17, pp. 1-9
Open Access | Times Cited: 177
RNA structure drives interaction with proteins
Natalia Sánchez de Groot, Alexandros Armaos, Ricardo Graña‐Montes, et al.
Nature Communications (2019) Vol. 10, Iss. 1
Open Access | Times Cited: 147
RNA m6A demethylase FTO-mediated epigenetic up-regulation of LINC00022 promotes tumorigenesis in esophageal squamous cell carcinoma
Yuanbo Cui, Chunyan Zhang, Shanshan Ma, et al.
Journal of Experimental & Clinical Cancer Research (2021) Vol. 40, Iss. 1
Open Access | Times Cited: 110
Long non-coding RNA and RNA-binding protein interactions in cancer: Experimental and machine learning approaches
Hibah Shaath, Radhakrishnan Vishnubalaji, Ramesh Elango, et al.
Seminars in Cancer Biology (2022) Vol. 86, pp. 325-345
Open Access | Times Cited: 91
circPTEN1, a circular RNA generated from PTEN, suppresses cancer progression through inhibition of TGF-β/Smad signaling
Lin Zheng, Hui Liang, Qiaoling Zhang, et al.
Molecular Cancer (2022) Vol. 21, Iss. 1
Open Access | Times Cited: 76
SNHG16 is regulated by the Wnt pathway in colorectal cancer and affects genes involved in lipid metabolism
Lise Lotte Christensen, Kirsten True, Mark P. Hamilton, et al.
Molecular Oncology (2016) Vol. 10, Iss. 8, pp. 1266-1282
Open Access | Times Cited: 162
SFPEL-LPI: Sequence-based feature projection ensemble learning for predicting LncRNA-protein interactions
Wen Zhang, Xiang Yue, Guping Tang, et al.
PLoS Computational Biology (2018) Vol. 14, Iss. 12, pp. e1006616-e1006616
Open Access | Times Cited: 149
The linear neighborhood propagation method for predicting long non-coding RNA–protein interactions
Wen Zhang, Qianlong Qu, Yunqiu Zhang, et al.
Neurocomputing (2017) Vol. 273, pp. 526-534
Closed Access | Times Cited: 147
Role of MYC-Regulated Long Noncoding RNAs in Cell Cycle Regulation and Tumorigenesis
Tae‐Wan Kim, Young-Jun Jeon, Ri Cui, et al.
JNCI Journal of the National Cancer Institute (2015) Vol. 107, Iss. 4
Open Access | Times Cited: 146
IPMiner: hidden ncRNA-protein interaction sequential pattern mining with stacked autoencoder for accurate computational prediction
Xiaoyong Pan, Yongxian Fan, Junchi Yan, et al.
BMC Genomics (2016) Vol. 17, Iss. 1
Open Access | Times Cited: 145
An HDAC9-MALAT1-BRG1 complex mediates smooth muscle dysfunction in thoracic aortic aneurysm
Christian L. Lino Cardenas, Chase W. Kessinger, Yisha Cheng, et al.
Nature Communications (2018) Vol. 9, Iss. 1
Open Access | Times Cited: 125
LncADeep: anab initiolncRNA identification and functional annotation tool based on deep learning
Cheng Yang, Longshu Yang, Man Zhou, et al.
Bioinformatics (2018) Vol. 34, Iss. 22, pp. 3825-3834
Closed Access | Times Cited: 125
Long noncoding RNA: a crosslink in biological regulatory network
Yu-Wei Zhang, Tao Yang, Qi Liao
Briefings in Bioinformatics (2017) Vol. 19, Iss. 5, pp. 930-945
Closed Access | Times Cited: 124
A Deep Learning Framework for Robust and Accurate Prediction of ncRNA-Protein Interactions Using Evolutionary Information
Hai-Cheng Yi, Zhu‐Hong You, De-Shuang Huang, et al.
Molecular Therapy — Nucleic Acids (2018) Vol. 11, pp. 337-344
Open Access | Times Cited: 124
linc-UBC1 physically associates with polycomb repressive complex 2 (PRC2) and acts as a negative prognostic factor for lymph node metastasis and survival in bladder cancer
Wang He, Qingqing Cai, Fenyong Sun, et al.
Biochimica et Biophysica Acta (BBA) - Molecular Basis of Disease (2013) Vol. 1832, Iss. 10, pp. 1528-1537
Open Access | Times Cited: 117
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