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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Metatranscriptomics for the Human Microbiome and Microbial Community Functional Profiling
Yancong Zhang, Kelsey N. Thompson, Tobyn Branck, et al.
Annual Review of Biomedical Data Science (2021) Vol. 4, Iss. 1, pp. 279-311
Closed Access | Times Cited: 64

Showing 1-25 of 64 citing articles:

Understanding human health through metatranscriptomics
Teija Ojala, Esko Kankuri, Matti Kankainen
Trends in Molecular Medicine (2023) Vol. 29, Iss. 5, pp. 376-389
Open Access | Times Cited: 53
Microbiome epidemiology and association studies in human health
Hannah VanEvery, Eric A. Franzosa, Long H. Nguyen, et al.
Nature Reviews Genetics (2022) Vol. 24, Iss. 2, pp. 109-124
Closed Access | Times Cited: 54
Integrated multi-omics analyses of microbial communities: a review of the current state and future directions
Muzaffer Arıkan, Thilo Muth
Molecular Omics (2023) Vol. 19, Iss. 8, pp. 607-623
Open Access | Times Cited: 33
The interplay between herbal medicines and gut microbiota in metabolic diseases
Lijie Wang, Xiaoling Gou, Yin Ding, et al.
Frontiers in Pharmacology (2023) Vol. 14
Open Access | Times Cited: 31
Current concepts, advances, and challenges in deciphering the human microbiota with metatranscriptomics
Teija Ojala, Aino-Elina Häkkinen, Esko Kankuri, et al.
Trends in Genetics (2023) Vol. 39, Iss. 9, pp. 686-702
Open Access | Times Cited: 24
Interkingdom interactions between Pseudomonas aeruginosa and Candida albicans affect clinical outcomes and antimicrobial responses
Lisa Juliane Kahl, Nina Stremmel, M. Alejandra Esparza-Mora, et al.
Current Opinion in Microbiology (2023) Vol. 75, pp. 102368-102368
Closed Access | Times Cited: 23
Carotenoids in Health as Studied by Omics-Related Endpoints
Torsten Bohn, Emilio Balbuena, Hande Z. Ulus, et al.
Advances in Nutrition (2023) Vol. 14, Iss. 6, pp. 1538-1578
Open Access | Times Cited: 23
Analysis and culturing of the prototypic crAssphage reveals a phage-plasmid lifestyle
Danica T. Schmidtke, Angela Shang-Mei Hickey, Ivan Liachko, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 13
High-throughput transcriptomics of 409 bacteria–drug pairs reveals drivers of gut microbiota perturbation
Deirdre Ricaurte, Yiming Huang, Ravi U. Sheth, et al.
Nature Microbiology (2024) Vol. 9, Iss. 2, pp. 561-575
Open Access | Times Cited: 9
The Role and Applications of Artificial Intelligence in the Treatment of Chronic Pain
Tiffany A. Meier, Mohammad S. Refahi, Gavin Hearne, et al.
Current Pain and Headache Reports (2024) Vol. 28, Iss. 8, pp. 769-784
Closed Access | Times Cited: 8
Integrating the milk microbiome signatures in mastitis: milk-omics and functional implications
Rine Christopher Reuben, Carmén Torres
World Journal of Microbiology and Biotechnology (2025) Vol. 41, Iss. 2
Open Access | Times Cited: 1
Revisiting the ecological significance, composition, and functions of plant microbiome: a review
Kandeeparoopan Prasannath, S. Arulraj, Keerthika Shakthivel, et al.
New Zealand Journal of Crop and Horticultural Science (2025), pp. 1-33
Closed Access | Times Cited: 1
Opportunities and challenges in omics approaches for biosurfactant production and feasibility of site remediation: Strategies and advancements
Vivek Kumar Gaur, Poonam Sharma, Shivangi Gupta, et al.
Environmental Technology & Innovation (2021) Vol. 25, pp. 102132-102132
Open Access | Times Cited: 54
Metagenomics: a path to understanding the gut microbiome
Sandi Yen, Jethro S. Johnson
Mammalian Genome (2021) Vol. 32, Iss. 4, pp. 282-296
Open Access | Times Cited: 51
The Intestinal Microbiota May Be a Potential Theranostic Tool for Personalized Medicine
Marina Di Domenico, Andrea Ballini, Mariarosaria Boccellino, et al.
Journal of Personalized Medicine (2022) Vol. 12, Iss. 4, pp. 523-523
Open Access | Times Cited: 37
Integrating Omics Technologies for a Comprehensive Understanding of the Microbiome and Its Impact on Cattle Production
Harpreet Kaur, Gurjeet Kaur, Taruna Gupta, et al.
Biology (2023) Vol. 12, Iss. 9, pp. 1200-1200
Open Access | Times Cited: 17
A metatranscriptomics strategy for efficient characterization of the microbiome in human tissues with low microbial biomass
Joana Pereira‐Marques, Rui M. Ferreira, Céu Figueiredo
Gut Microbes (2024) Vol. 16, Iss. 1
Open Access | Times Cited: 6
The geomicrobiology of limestone, sulfuric acid speleogenetic, and volcanic caves: basic concepts and future perspectives
Paolo Turrini, Alif Chebbi, Filippo Pasquale Riggio, et al.
Frontiers in Microbiology (2024) Vol. 15
Open Access | Times Cited: 6
Christensenella minuta interacts with multiple gut bacteria
Chang Xu, He Jiang, Lijuan Feng, et al.
Frontiers in Microbiology (2024) Vol. 15
Open Access | Times Cited: 5
Assessing microbiota in vivo: debugging with medical imaging
Donna E. Goldhawk, Kait F. Al, Sarah C. Donnelly, et al.
Trends in Microbiology (2025)
Closed Access
An ensemble approach to the structure-function problem in microbial communities
Chandana Gopalakrishnappa, Karna Gowda, Kaumudi Prabhakara, et al.
iScience (2022) Vol. 25, Iss. 2, pp. 103761-103761
Open Access | Times Cited: 21
Progress and opportunities in microbial community metabolomics
Amrisha Bhosle, Ya Wang, Eric A. Franzosa, et al.
Current Opinion in Microbiology (2022) Vol. 70, pp. 102195-102195
Open Access | Times Cited: 21
Metatranscriptomics-guided discovery and characterization of a polyphenol-metabolizing gut microbial enzyme
Minwoo Bae, Chi Hieu Le, Raaj S. Mehta, et al.
Cell Host & Microbe (2024)
Open Access | Times Cited: 4
Optimizing mouse metatranscriptome profiling by selective removal of redundant nucleic acid sequences
Morgan Roos, Samuel Bunga, Asako Tan, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2025)
Open Access
Standard mouse diets lead to differences in severity in infectious and non-infectious colitis
Joshua E. Denny, Julia N. Flores, Nontokozo V. Mdluli, et al.
mBio (2025)
Open Access
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