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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Microbial single-cell RNA sequencing by split-pool barcoding
Anna Kuchina, Leandra Brettner, Luana Paleologu, et al.
Science (2021) Vol. 371, Iss. 6531
Open Access | Times Cited: 237

Showing 1-25 of 237 citing articles:

Gut microbiota in colorectal cancer development and therapy
Chi Chun Wong, Jun Yu
Nature Reviews Clinical Oncology (2023) Vol. 20, Iss. 7, pp. 429-452
Closed Access | Times Cited: 260
Spatial transcriptomics of planktonic and sessile bacterial populations at single-cell resolution
Daniel Dar, Nina Dar, Long Cai, et al.
Science (2021) Vol. 373, Iss. 6556
Open Access | Times Cited: 207
Prokaryotic single-cell RNA sequencing by in situ combinatorial indexing
Sydney B. Blattman, Wenyan Jiang, Panos Oikonomou, et al.
Nature Microbiology (2020) Vol. 5, Iss. 10, pp. 1192-1201
Open Access | Times Cited: 159
Bacterial droplet-based single-cell RNA-seq reveals antibiotic-associated heterogeneous cellular states
Peijun Ma, Haley M. Amemiya, Lorrie L. He, et al.
Cell (2023) Vol. 186, Iss. 4, pp. 877-891.e14
Open Access | Times Cited: 148
Microbiota in Tumors: From Understanding to Application
Yifan Xie, Feng Xie, Xiaoxue Zhou, et al.
Advanced Science (2022) Vol. 9, Iss. 21
Open Access | Times Cited: 113
Phyllosphere Microbiome
Reza Sohrabi, Bradley C. Paasch, Julian A. Liber, et al.
Annual Review of Plant Biology (2023) Vol. 74, Iss. 1, pp. 539-568
Open Access | Times Cited: 84
Machine learning for microbiologists
Francesco Asnicar, Andrew Maltez Thomas, Andrea Passerini, et al.
Nature Reviews Microbiology (2023) Vol. 22, Iss. 4, pp. 191-205
Open Access | Times Cited: 79
Single-cell approaches in human microbiome research
Verónica Lloréns‐Rico, Joshua A. Simcock, Geert Huys, et al.
Cell (2022) Vol. 185, Iss. 15, pp. 2725-2738
Open Access | Times Cited: 72
Probe-based bacterial single-cell RNA sequencing predicts toxin regulation
Ryan McNulty, Duluxan Sritharan, Seong Ho Pahng, et al.
Nature Microbiology (2023) Vol. 8, Iss. 5, pp. 934-945
Open Access | Times Cited: 65
Droplet-based high-throughput single microbe RNA sequencing by smRandom-seq
Ziye Xu, Yuting Wang, Kuanwei Sheng, et al.
Nature Communications (2023) Vol. 14, Iss. 1
Open Access | Times Cited: 49
Conditioning of the immune system by the microbiome
Daniel B. Graham, Ramnik J. Xavier
Trends in Immunology (2023) Vol. 44, Iss. 7, pp. 499-511
Open Access | Times Cited: 47
Spatial host–microbiome sequencing reveals niches in the mouse gut
Britta Lötstedt, Martin Stražar, Ramnik J. Xavier, et al.
Nature Biotechnology (2023) Vol. 42, Iss. 9, pp. 1394-1403
Open Access | Times Cited: 47
Improved Bacterial Single-Cell RNA-Seq through Automated MATQ-Seq and Cas9-Based Removal of rRNA Reads
Christina Homberger, Regan J. Hayward, Lars Barquist, et al.
mBio (2023) Vol. 14, Iss. 2
Open Access | Times Cited: 44
Co-transcriptional gene regulation in eukaryotes and prokaryotes
Morgan Shine, Jackson M. Gordon, Leonard Schärfen, et al.
Nature Reviews Molecular Cell Biology (2024) Vol. 25, Iss. 7, pp. 534-554
Closed Access | Times Cited: 23
Transcription–replication interactions reveal bacterial genome regulation
Andrew W. Pountain, Peien Jiang, Tianyou Yao, et al.
Nature (2024) Vol. 626, Iss. 7999, pp. 661-669
Open Access | Times Cited: 20
Massively parallel single-cell sequencing of diverse microbial populations
Freeman Lan, Jason Saba, Tyler D. Ross, et al.
Nature Methods (2024) Vol. 21, Iss. 2, pp. 228-235
Open Access | Times Cited: 18
Single-cell transcriptomics across 2,534 microbial species reveals functional heterogeneity in the rumen microbiome
Minghui Jia, Senlin Zhu, Ming‐Yuan Xue, et al.
Nature Microbiology (2024) Vol. 9, Iss. 7, pp. 1884-1898
Closed Access | Times Cited: 18
Cross-species RNA-seq for deciphering host–microbe interactions
Alexander J. Westermann, Jörg Vogel
Nature Reviews Genetics (2021) Vol. 22, Iss. 6, pp. 361-378
Open Access | Times Cited: 85
Best practices on the differential expression analysis of multi-species RNA-seq
Matthew Chung, Vincent M. Bruno, David A. Rasko, et al.
Genome biology (2021) Vol. 22, Iss. 1
Open Access | Times Cited: 78
Plastisphere community assemblage of aquatic environment: plastic-microbe interaction, role in degradation and characterization technologies
Sujata Dey, Ajaya Kumar Rout, Bijay Kumar Behera, et al.
Environmental Microbiome (2022) Vol. 17, Iss. 1
Open Access | Times Cited: 60
Single cell RNA‐sequencing: A powerful yet still challenging technology to study cellular heterogeneity
May Sin Ke, Badran Elshenawy, Helen Sheldon, et al.
BioEssays (2022) Vol. 44, Iss. 11
Open Access | Times Cited: 48
Methods to Evaluate Bacterial Motility and Its Role in Bacterial–Host Interactions
Victoria Palma, María Soledad Gutiérrez, Orlando Vargas, et al.
Microorganisms (2022) Vol. 10, Iss. 3, pp. 563-563
Open Access | Times Cited: 43
Ushering in a new era of single-cell transcriptomics in bacteria
Christina Homberger, Lars Barquist, Jörg Vogel
microLife (2022) Vol. 3
Open Access | Times Cited: 43
Single-cell massively-parallel multiplexed microbial sequencing (M3-seq) identifies rare bacterial populations and profiles phage infection
Bruce Wang, Aaron E. Lin, Jiayi Yuan, et al.
Nature Microbiology (2023) Vol. 8, Iss. 10, pp. 1846-1862
Open Access | Times Cited: 38
The Blood Microbiome and Health: Current Evidence, Controversies, and Challenges
Hong Sheng Cheng, Sin Pei Tan, David Meng Kit Wong, et al.
International Journal of Molecular Sciences (2023) Vol. 24, Iss. 6, pp. 5633-5633
Open Access | Times Cited: 33
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