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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Single-cell mapping of gene expression landscapes and lineage in the zebrafish embryo
Daniel E. Wagner, Caleb Weinreb, Zach M. Collins, et al.
Science (2018) Vol. 360, Iss. 6392, pp. 981-987
Open Access | Times Cited: 776

Showing 1-25 of 776 citing articles:

The single-cell transcriptional landscape of mammalian organogenesis
Junyue Cao, Malte Spielmann, Xiaojie Qiu, et al.
Nature (2019) Vol. 566, Iss. 7745, pp. 496-502
Open Access | Times Cited: 3142
Current best practices in single‐cell RNA‐seq analysis: a tutorial
Malte D. Luecken, Fabian J. Theis
Molecular Systems Biology (2019) Vol. 15, Iss. 6
Open Access | Times Cited: 1658
PAGA: graph abstraction reconciles clustering with trajectory inference through a topology preserving map of single cells
F. Alexander Wolf, Fiona Hamey, Mireya Plass, et al.
Genome biology (2019) Vol. 20, Iss. 1
Open Access | Times Cited: 1278
Single-Cell Transcriptomics of Human and Mouse Lung Cancers Reveals Conserved Myeloid Populations across Individuals and Species
Rapolas Žilionis, Camilla Engblom, Christina Pfirschke, et al.
Immunity (2019) Vol. 50, Iss. 5, pp. 1317-1334.e10
Open Access | Times Cited: 1137
Eleven grand challenges in single-cell data science
David Lähnemann, Johannes Köster, Ewa Szczurek, et al.
Genome biology (2020) Vol. 21, Iss. 1
Open Access | Times Cited: 990
Construction of a human cell landscape at single-cell level
Xiaoping Han, Ziming Zhou, Lijiang Fei, et al.
Nature (2020) Vol. 581, Iss. 7808, pp. 303-309
Closed Access | Times Cited: 888
A single-cell molecular map of mouse gastrulation and early organogenesis
Blanca Pijuan-Sala, Jonathan A. Griffiths, Carolina Guibentif, et al.
Nature (2019) Vol. 566, Iss. 7745, pp. 490-495
Open Access | Times Cited: 849
Optimal-Transport Analysis of Single-Cell Gene Expression Identifies Developmental Trajectories in Reprogramming
Geoffrey Schiebinger, Jian Shu, Marcin Tabaka, et al.
Cell (2019) Vol. 176, Iss. 4, pp. 928-943.e22
Open Access | Times Cited: 606
A human cell atlas of fetal gene expression
Junyue Cao, Diana R. O’Day, Hannah A. Pliner, et al.
Science (2020) Vol. 370, Iss. 6518
Open Access | Times Cited: 589
Single‐cell RNA sequencing technologies and applications: A brief overview
Dragomirka Jovic, Xue Liang, Zeng Hua, et al.
Clinical and Translational Medicine (2022) Vol. 12, Iss. 3
Open Access | Times Cited: 576
Confronting false discoveries in single-cell differential expression
Jordan W. Squair, Matthieu Gautier, Claudia Kathe, et al.
Nature Communications (2021) Vol. 12, Iss. 1
Open Access | Times Cited: 564
The dynamics of gene expression in vertebrate embryogenesis at single-cell resolution
James Briggs, Caleb Weinreb, Daniel E. Wagner, et al.
Science (2018) Vol. 360, Iss. 6392
Open Access | Times Cited: 559
MULTI-seq: sample multiplexing for single-cell RNA sequencing using lipid-tagged indices
Christopher S. McGinnis, David M. Patterson, Juliane Winkler, et al.
Nature Methods (2019) Vol. 16, Iss. 7, pp. 619-626
Open Access | Times Cited: 552
Lineage tracing on transcriptional landscapes links state to fate during differentiation
Caleb Weinreb, Alejo Rodriguez-Fraticelli, Fernando D. Camargo, et al.
Science (2020) Vol. 367, Iss. 6479
Open Access | Times Cited: 548
Characterization of cell fate probabilities in single-cell data with Palantir
Manu Setty, Vaidotas Kiseliovas, Jacob Levine, et al.
Nature Biotechnology (2019) Vol. 37, Iss. 4, pp. 451-460
Open Access | Times Cited: 529
A lineage-resolved molecular atlas of C. elegans embryogenesis at single-cell resolution
Jonathan S. Packer, Qin Zhu, Chau Huynh, et al.
Science (2019) Vol. 365, Iss. 6459
Open Access | Times Cited: 483
Lineage tracing meets single-cell omics: opportunities and challenges
Daniel E. Wagner, Allon M. Klein
Nature Reviews Genetics (2020) Vol. 21, Iss. 7, pp. 410-427
Open Access | Times Cited: 479
Mechanisms regulating zygotic genome activation
Katharine N. Schulz, Melissa M. Harrison
Nature Reviews Genetics (2018) Vol. 20, Iss. 4, pp. 221-234
Open Access | Times Cited: 430
Benchmarking single-cell RNA-sequencing protocols for cell atlas projects
Elisabetta Mereu, Atefeh Lafzi, Cátia Moutinho, et al.
Nature Biotechnology (2020) Vol. 38, Iss. 6, pp. 747-755
Open Access | Times Cited: 401
The emergence of transcriptional identity in somatosensory neurons
Nikhil Sharma, Kali Flaherty, Karina Lezgiyeva, et al.
Nature (2020) Vol. 577, Iss. 7790, pp. 392-398
Open Access | Times Cited: 377
Comparative Analysis of Droplet-Based Ultra-High-Throughput Single-Cell RNA-Seq Systems
Xiannian Zhang, Tianqi Li, Feng Liu, et al.
Molecular Cell (2018) Vol. 73, Iss. 1, pp. 130-142.e5
Open Access | Times Cited: 333
Stem cell differentiation trajectories in Hydra resolved at single-cell resolution
Stefan Siebert, Jeffrey A. Farrell, Jack F. Cazet, et al.
Science (2019) Vol. 365, Iss. 6451
Open Access | Times Cited: 328
Single-cell mapping of lineage and identity in direct reprogramming
Brent A. Biddy, Wenjun Kong, Kenji Kamimoto, et al.
Nature (2018) Vol. 564, Iss. 7735, pp. 219-224
Open Access | Times Cited: 323
Molecular recording of mammalian embryogenesis
Michelle M. Chan, Zachary D. Smith, Stefanie Grosswendt, et al.
Nature (2019) Vol. 570, Iss. 7759, pp. 77-82
Open Access | Times Cited: 320
The Cellular and Physiological Basis for Lung Repair and Regeneration: Past, Present, and Future
Maria C. Basil, Jeremy Katzen, Anna Engler, et al.
Cell stem cell (2020) Vol. 26, Iss. 4, pp. 482-502
Open Access | Times Cited: 307
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