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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Secondary Structure and Contact Guided Differential Evolution for Protein Structure Prediction
Guijun Zhang, Laifa Ma, Xiaoqi Wang, et al.
IEEE/ACM Transactions on Computational Biology and Bioinformatics (2018) Vol. 17, Iss. 3, pp. 1068-1081
Closed Access | Times Cited: 44

Showing 1-25 of 44 citing articles:

MO4: A Many-Objective Evolutionary Algorithm for Protein Structure Prediction
Zhenyu Lei, Shangce Gao, Zhiming Zhang, et al.
IEEE Transactions on Evolutionary Computation (2021) Vol. 26, Iss. 3, pp. 417-430
Closed Access | Times Cited: 74
CGLFold: a contact-assistedde novoprotein structure prediction using global exploration and loop perturbation sampling algorithm
Jun Liu, Xiaogen Zhou, Yang Zhang, et al.
Bioinformatics (2019) Vol. 36, Iss. 8, pp. 2443-2450
Closed Access | Times Cited: 38
Different methods, techniques and their limitations in protein structure prediction: A review
Vrushali Bongirwar, Anil Mokhade
Progress in Biophysics and Molecular Biology (2022) Vol. 173, pp. 72-82
Closed Access | Times Cited: 20
Balancing multiple objectives in conformation sampling to control decoy diversity in template-free protein structure prediction
Ahmed Bin Zaman, Amarda Shehu
BMC Bioinformatics (2019) Vol. 20, Iss. 1
Open Access | Times Cited: 22
Prediction of protein secondary structure based on an improved channel attention and multiscale convolution module
Xin Jin, Lin Guo, Qian Jiang, et al.
Frontiers in Bioengineering and Biotechnology (2022) Vol. 10
Open Access | Times Cited: 11
Artificial intelligence for template-free protein structure prediction: a comprehensive review
M. M. Mohamed Mufassirin, M. A. Hakim Newton, Abdul Sattar
Artificial Intelligence Review (2022) Vol. 56, Iss. 8, pp. 7665-7732
Closed Access | Times Cited: 10
In-Silico Approaches for Molecular Characterization and Structure-Based Functional Annotation of the Matrix Protein from Nipah henipavirus
Abu Saim Mohammad Saikat, Apurbo Kumar Paul, Dipta Dey, et al.
The 17th International Electronic Conference on Synthetic Organic Chemistry (2022), pp. 21-21
Open Access | Times Cited: 9
Generating Tertiary Protein Structures via an Interpretative Variational Autoencoder
Xiaojie Guo, Sivani Tadepalli, Liang Zhao, et al.
arXiv (Cornell University) (2020)
Open Access | Times Cited: 13
Enhancing protein inter-residue real distance prediction by scrutinising deep learning models
Julia Rahman, M. A. Hakim Newton, Md Khaled Ben Islam, et al.
Scientific Reports (2022) Vol. 12, Iss. 1
Open Access | Times Cited: 8
OneHotEncoding and LSTM-based deep learning models for protein secondary structure prediction
Vamsidhar Enireddy, C. Karthikeyan, D. Vijendra Babu
Soft Computing (2022) Vol. 26, Iss. 8, pp. 3825-3836
Closed Access | Times Cited: 8
Protein structure prediction with evolutionary algorithm
Rafael Stubs Parpinelli, Nicholas Wojeicchowski, Nilcimar Neitzel Will
Advances in protein chemistry and structural biology (2024)
Closed Access | Times Cited: 1
De novo Protein Structure Prediction by Coupling Contact With Distance Profile
Chunxiang Peng, Xiaogen Zhou, Guijun Zhang
IEEE/ACM Transactions on Computational Biology and Bioinformatics (2020) Vol. 19, Iss. 1, pp. 395-406
Closed Access | Times Cited: 12
X-architecture Steiner minimal tree algorithm based on multi-strategy optimization discrete differential evolution
Genggeng Liu, Liliang Yang, Saijuan Xu, et al.
PeerJ Computer Science (2021) Vol. 7, pp. e473-e473
Open Access | Times Cited: 11
Learning Reduced Latent Representations of Protein Structure Data
Fardina Fathmiul Alam, Taseef Rahman, Amarda Shehu
(2019), pp. 592-597
Open Access | Times Cited: 11
Evaluating Autoencoder-Based Featurization and Supervised Learning for Protein Decoy Selection
Fardina Fathmiul Alam, Taseef Rahman, Amarda Shehu
Molecules (2020) Vol. 25, Iss. 5, pp. 1146-1146
Open Access | Times Cited: 11
Protein Structure Prediction Using Population-Based Algorithm Guided by Information Entropy
Guijun Zhang, Tengyu Xie, Xiaogen Zhou, et al.
IEEE/ACM Transactions on Computational Biology and Bioinformatics (2019) Vol. 18, Iss. 2, pp. 697-707
Closed Access | Times Cited: 9
Reducing Ensembles of Protein Tertiary Structures Generated De Novo via Clustering
Ahmed Bin Zaman, Parastoo Kamranfar, Carlotta Domeniconi, et al.
Molecules (2020) Vol. 25, Iss. 9, pp. 2228-2228
Open Access | Times Cited: 8
Enhancing protein contact map prediction accuracy via ensembles of inter-residue distance predictors
M. A. Hakim Newton, Julia Rahman, Rianon Zaman, et al.
Computational Biology and Chemistry (2022) Vol. 99, pp. 107700-107700
Closed Access | Times Cited: 5
Using Sequence-Predicted Contacts to Guide Template-free Protein Structure Prediction
Ahmed Bin Zaman, Prasanna Parthasarathy, Amarda Shehu
(2019), pp. 154-160
Open Access | Times Cited: 6
Decoy selection for protein structure prediction via extreme gradient boosting and ranking
Nasrin Akhter, Gopinath Chennupati, Hristo Djidjev, et al.
BMC Bioinformatics (2020) Vol. 21, Iss. S1
Open Access | Times Cited: 6
Two-Stage Distance Feature-based Optimization Algorithm for De novo Protein Structure Prediction
Guijun Zhang, Xiaoqi Wang, Laifa Ma, et al.
IEEE/ACM Transactions on Computational Biology and Bioinformatics (2019) Vol. 17, Iss. 6, pp. 2119-2130
Closed Access | Times Cited: 5
Equipping Decoy Generation Algorithms for Template-free Protein Structure Prediction with Maps of the Protein Conformation Space
Ahmed Bin Zaman, Amarda Shehu
EPiC series in computing (2019) Vol. 60, pp. 161-151
Open Access | Times Cited: 4
Decoy Ensemble Reduction in Template-free Protein Structure Prediction
Ahmed Bin Zaman, Parastoo Kamranfar, Carlotta Domeniconi, et al.
(2019), pp. 562-567
Open Access | Times Cited: 4
Building maps of protein structure spaces in template-free protein structure prediction
Ahmed Bin Zaman, Amarda Shehu
Journal of Bioinformatics and Computational Biology (2019) Vol. 17, Iss. 06, pp. 1940013-1940013
Closed Access | Times Cited: 4
Salp-J Colony Optimization-based advanced hybrid ensemble deep predictor with LSTM for protein structure prediction
Swati Jadhav, Arati J. Vyavahare, Manish Sharma
Journal of Biomolecular Structure and Dynamics (2024), pp. 1-16
Closed Access
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