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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

AlphaFold2 Can Predict Single-Mutation Effects
J. Michael McBride, Konstantin Polev, Amirbek Abdirasulov, et al.
Physical Review Letters (2023) Vol. 131, Iss. 21
Open Access | Times Cited: 39

Showing 1-25 of 39 citing articles:

AlphaFold2 and its applications in the fields of biology and medicine
Zhenyu Yang, Xiaoxi Zeng, Yi Zhao, et al.
Signal Transduction and Targeted Therapy (2023) Vol. 8, Iss. 1
Open Access | Times Cited: 206
RosettaDDGPrediction for high‐throughput mutational scans: From stability to binding
Valentina Sora, Adrian Otamendi Laspiur, Kristine Degn, et al.
Protein Science (2022) Vol. 32, Iss. 1
Open Access | Times Cited: 37
Navigating the landscape of enzyme design: from molecular simulations to machine learning
Jiahui Zhou, Meilan Huang
Chemical Society Reviews (2024) Vol. 53, Iss. 16, pp. 8202-8239
Open Access | Times Cited: 8
AlphaFold2 Modeling and Molecular Dynamics Simulations of the Conformational Ensembles for the SARS-CoV-2 Spike Omicron JN.1, KP.2 and KP.3 Variants: Mutational Profiling of Binding Energetics Reveals Epistatic Drivers of the ACE2 Affinity and Escape Hotspots of Antibody Resistance
Nishank Raisinghani, Mohammed Alshahrani, Grace Gupta, et al.
Viruses (2024) Vol. 16, Iss. 9, pp. 1458-1458
Open Access | Times Cited: 6
High‐Throughput Evaluation of Natural Diversity of F‐Type ATP Synthase Rotor Ring Stoichiometries
Stepan D. Osipov, Egor V. Zinovev, Arina A. Anuchina, et al.
Proteins Structure Function and Bioinformatics (2025)
Closed Access
Engineering cardiolipin binding to an artificial membrane protein reveals determinants for lipid-mediated stabilization
Mia Abramsson, Robin A. Corey, Jan Škerle, et al.
(2025)
Open Access
Engineering cardiolipin binding to an artificial membrane protein reveals determinants for lipid-mediated stabilization
Mia Abramsson, Robin A. Corey, Jan Škerle, et al.
(2025)
Open Access
Concepts and Methods for Predicting Viral Evolution
Matthijs Meijers, Denis Ruchnewitz, Jan Eberhardt, et al.
Methods in molecular biology (2025), pp. 253-290
Closed Access
Integrative analysis of pathogenic variants in glucose-6-phosphatase based on an AlphaFold2 model
Matt Sinclair, Richard A. Stein, Jonathan H. Sheehan, et al.
PNAS Nexus (2024) Vol. 3, Iss. 2
Open Access | Times Cited: 4
The physical logic of protein machines
J. Michael McBride, Tsvi Tlusty
Journal of Statistical Mechanics Theory and Experiment (2024) Vol. 2024, Iss. 2, pp. 024001-024001
Open Access | Times Cited: 4
Concepts and methods for predicting viral evolution
Matthijs Meijers, Denis Ruchnewitz, Jan Eberhardt, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 4
AlphaFold3, a secret sauce for predicting mutational effects on protein-protein interactions
Wei Lu, Jixian Zhang, Jiahua Rao, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 4
The Origin and Evolution of Sex Peptide and Sex Peptide Receptor Interactions
Junhui Peng, Nicolas Svetec, Henrik Molina, et al.
Molecular Biology and Evolution (2024) Vol. 41, Iss. 4
Open Access | Times Cited: 3
AI-Predicted Protein Deformation Encodes Energy Landscape Perturbation
J. Michael McBride, Tsvi Tlusty
Physical Review Letters (2024) Vol. 133, Iss. 9
Closed Access | Times Cited: 3
Predicting Mutation-Induced Allosteric Changes in Structures and Conformational Ensembles of the ABL Kinase Using AlphaFold2 Adaptations with Alanine Sequence Scanning
Nishank Raisinghani, Mohammed Alshahrani, Grace Gupta, et al.
International Journal of Molecular Sciences (2024) Vol. 25, Iss. 18, pp. 10082-10082
Open Access | Times Cited: 3
Phylogenetically and structurally diverse reductive dehalogenases link biogeochemical cycles in deep-sea cold seeps
Yingchun Han, Yongyi Peng, Jiaxue Peng, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 2
Pathways to a Shiny Future: Building the Foundation for Computational Physical Chemistry and Biophysics in 2050
Denys Biriukov, Robert Vácha
ACS Physical Chemistry Au (2024) Vol. 4, Iss. 4, pp. 302-313
Open Access | Times Cited: 2
Predicting protein conformational motions using energetic frustration analysis and AlphaFold2
Xingyue Guan, Qian-Yuan Tang, Weitong Ren, et al.
Proceedings of the National Academy of Sciences (2024) Vol. 121, Iss. 35
Closed Access | Times Cited: 2
Probing Functional Allosteric States and Conformational Ensembles of the Allosteric Protein Kinase States and Mutants: Atomistic Modeling and Comparative Analysis of AlphaFold2, OmegaFold, and AlphaFlow Approaches and Adaptations
Nishank Raisinghani, Mohammed Merae Alshahrani, Grace Gupta, et al.
The Journal of Physical Chemistry B (2024) Vol. 128, Iss. 45, pp. 11088-11107
Closed Access | Times Cited: 2
AI-predicted protein deformation encodes energy landscape perturbation
J. Michael McBride, Tsvi Tlusty
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 7
General Theory of Specific Binding: Insights from a Genetic-Mechano-Chemical Protein Model
J. Michael McBride, Jean-Pierre Eckmann, Tsvi Tlusty
Molecular Biology and Evolution (2022) Vol. 39, Iss. 11
Open Access | Times Cited: 10
Computational Tools to Assist in Analyzing Effects of the SERPINA1 Gene Variation on Alpha-1 Antitrypsin (AAT)
Jakub Mróz, Magdalena Pelc, Karolina Mitusińska, et al.
Genes (2024) Vol. 15, Iss. 3, pp. 340-340
Open Access | Times Cited: 1
ThermoLink: Bridging disulfide bonds and enzyme thermostability through database construction and machine learning prediction
Ran Xu, Qican Pan, Guoliang Zhu, et al.
Protein Science (2024) Vol. 33, Iss. 9
Closed Access | Times Cited: 1
Assessing the Utility of ColabFold and AlphaMissense in Determining Missense Variant Pathogenicity for Congenital Myasthenic Syndromes
Finlay Ryan-Phillips, L. Henehan, Sithara Ramdas, et al.
Biomedicines (2024) Vol. 12, Iss. 11, pp. 2549-2549
Open Access | Times Cited: 1
Unmasking crucial residues in adipose triglyceride lipase for coactivation with comparative gene identification-58
Natalia Kulminskaya, Carlos Francisco Rodriguez Gamez, Peter Hofer, et al.
Journal of Lipid Research (2023) Vol. 65, Iss. 1, pp. 100491-100491
Open Access | Times Cited: 3
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