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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Structural phylogenetics unravels the evolutionary diversification of communication systems in gram-positive bacteria and their viruses
David Moi, Charles Bernard, Martin Steinegger, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 30

Showing 1-25 of 30 citing articles:

Viroid-like colonists of human microbiomes
Ivan N. Zheludev, R. C. Edgar, María José López-Galiano, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 18
Mapping glycoprotein structure reveals Flaviviridae evolutionary history
Jonathon C.O. Mifsud, Spyros Lytras, Michael R. Oliver, et al.
Nature (2024) Vol. 633, Iss. 8030, pp. 695-703
Open Access | Times Cited: 14
Multiple Protein Structure Alignment at Scale with FoldMason
Cameron L. M. Gilchrist, Milot Mirdita, Martin Steinegger
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 13
Viroid-like colonists of human microbiomes
Ivan N. Zheludev, R. C. Edgar, María José López-Galiano, et al.
Cell (2024) Vol. 187, Iss. 23, pp. 6521-6536.e18
Open Access | Times Cited: 13
Complexity of the lichen symbiosis revealed by metagenome and transcriptome analysis of Xanthoria parietina
Gulnara Tagirdzhanova, Klara Scharnagl, Neha Sahu, et al.
Current Biology (2025)
Open Access | Times Cited: 1
Discovery of a Thermostable Tagatose 4-Epimerase Powered by Structure- and Sequence-Based Protein Clustering
Jiajun Chen, Dawei Ni, Yingying Zhu, et al.
Journal of Agricultural and Food Chemistry (2024) Vol. 72, Iss. 33, pp. 18585-18593
Closed Access | Times Cited: 6
Reconstructing the last common ancestor of all eukaryotes
Thomas A. Richards, Laura Eme, John M. Archibald, et al.
PLoS Biology (2024) Vol. 22, Iss. 11, pp. e3002917-e3002917
Open Access | Times Cited: 5
Tertiary-interaction characters enable fast, model-based structural phylogenetics beyond the twilight zone
Caroline Puente-Lelièvre, Ashar J. Malik, Jordan Douglas, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 12
Structural characterization of macro domain–containing Thoeris antiphage defense systems
Yun Shi, Veronika Masic, Tamim Mosaiab, et al.
Science Advances (2024) Vol. 10, Iss. 26
Open Access | Times Cited: 4
Integrated analysis of protein sequence and structure redefines viral diversity and the taxonomy of the Flaviviridae
Peter Simmonds, Anamarija Butković, Joe Grove, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2025)
Open Access
Cold seeps are potential hotspots of deep-sea nitrogen loss driven by microorganisms across 21 phyla
Qiuyun Jiang, Lei Cao, Yingchun Han, et al.
Nature Communications (2025) Vol. 16, Iss. 1
Open Access
A review of BioTree construction in the context of information fusion: Priors, methods, applications and trends
Zelin Zang, Yongjie Xu, Chenrui Duan, et al.
Information Fusion (2025), pp. 103108-103108
Closed Access
Remote homolog detection places insect chemoreceptors in a cryptic protein superfamily spanning the tree of life
Nathaniel J. Himmel, David Moi, Richard Benton
Current Biology (2023) Vol. 33, Iss. 22, pp. 5023-5033.e4
Open Access | Times Cited: 8
An ancient lysozyme in placozoans
Henry Berndt, Igor Duarte, Urska Repnik, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 2
Phylogenetically and structurally diverse reductive dehalogenases link biogeochemical cycles in deep-sea cold seeps
Yingchun Han, Yongyi Peng, Jiaxue Peng, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 2
Using structure prediction of negative sense RNA virus nucleoproteins to assess evolutionary relationships
Kimberly R. Sabsay, Aartjan J. W. te Velthuis
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 2
How enzyme‐centered approaches are advancing research on cyclic oligo‐nucleotides
Simon J. Wenzl, Carina C. de Oliveira Mann
FEBS Letters (2024) Vol. 598, Iss. 8, pp. 839-863
Open Access | Times Cited: 1
Reticulate Evolution: Detection and Utility in the Phylogenomics Era
Saelin Bjornson, Heroen Verbruggen, Nathan S. Upham, et al.
(2024)
Open Access | Times Cited: 1
Cold seeps are hotspots of deep-sea nitrogen-loss driven by microorganisms across 21 phyla
Qiuyun Jiang, Lei Cao, Yingchun Han, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 1
Using structure prediction of negative sense RNA virus nucleoproteins to assess evolutionary relationships
Kimberly R. Sabsay, Aartjan J. W. te Velthuis
Virus Evolution (2024) Vol. 10, Iss. 1
Open Access | Times Cited: 1
From Gene to Structure: Unraveling Genomic Dark Matter in Ca. Accumulibacter
Xiaojing Xie, Xuhan Deng, Liping Chen, et al.
Environmental Science & Technology (2024)
Closed Access | Times Cited: 1
Large scale analysis of predicted protein structures links model features to in vivo behaviour
Michael J. Stam, Diego A. Oyarzún, Nadanai Laohakunakorn, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access
From gene to structure: Unraveling genomic dark matter in Ca. Accumulibacter
Xiaojing Xie, Xuhan Deng, Liping Chen, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access
Newly developed structure-based methods do not outperform standard sequence-based methods for large-scale phylogenomics
Giacomo Mutti, Eduard Ocaña‐Pallarès, Toni Gabaldón
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access
Multipartite complexity of the lichen symbiosis revealed by metagenome and transcriptome analysis of Xanthoria parietina
Gulnara Tagirdzhanova, Klara Scharnagl, Neha Sahu, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access
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