Open Access Helper

OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Deep generative modeling of sample-level heterogeneity in single-cell genomics
Pierre Boyeau, Justin Hong, Adam Gayoso, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2022)
Open Access | Times Cited: 16

Showing 16 citing articles:

Starfysh integrates spatial transcriptomic and histologic data to reveal heterogeneous tumor–immune hubs
Siyu He, Yinuo Jin, Achille Nazaret, et al.
Nature Biotechnology (2024)
Open Access | Times Cited: 19
Multicellular factor analysis of single-cell data for a tissue-centric understanding of disease
Ricardo O. Ramirez Flores, Jan D. Lanzer, Daniel Dimitrov, et al.
eLife (2023) Vol. 12
Open Access | Times Cited: 26
Multimodal profiling reveals tissue-directed signatures of human immune cells altered with age
Steven B. Wells, Daniel B. Rainbow, Michal Mark, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 7
Heterogeneous pseudobulk simulation enables realistic benchmarking of cell-type deconvolution methods
Mengying Hu, Maria Chikina
Genome biology (2024) Vol. 25, Iss. 1
Open Access | Times Cited: 5
Biases in machine-learning models of human single-cell data
Theresa Willem, Vladimir A. Shitov, Malte D. Luecken, et al.
Nature Cell Biology (2025)
Closed Access
Multimodal weakly supervised learning to identify disease-specific changes in single-cell atlases
Anastasia Litinetskaya, Maiia Shulman, Soroor Hediyeh-zadeh, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 4
A variational deep-learning approach to modeling memory T cell dynamics
Christiaan H. van Dorp, Joshua I. Gray, Daniel H. Paik, et al.
(2024)
Closed Access | Times Cited: 3
A thousand and one tumors: the promise of AI for cancer biology
Joy Linyue Fan, Achille Nazaret, Elham Azizi
Nature Methods (2024) Vol. 21, Iss. 8, pp. 1403-1406
Closed Access | Times Cited: 2
Multicellular factor analysis of single-cell data for a tissue-centric understanding of disease
Ricardo O. Ramirez Flores, Jan D. Lanzer, Daniel Dimitrov, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 6
Multi-omic characterization of human sural nerves across polyneuropathies
Michael Heming, Jolien Wolbert, Anna‐Lena Börsch, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 1
Precise identification of cell states altered in disease with healthy single-cell references
Emma Dann, Sarah A. Teichmann, John C. Marioni
bioRxiv (Cold Spring Harbor Laboratory) (2022)
Open Access | Times Cited: 6
Starfysh reveals heterogeneous spatial dynamics in the breast tumor microenvironment
Siyu He, Yinuo Jin, Achille Nazaret, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2022)
Open Access | Times Cited: 5
A heterogeneous pharmaco-transcriptomic landscape induced by targeting a single oncogenic kinase
Ross Giglio, Nicholas Hou, Adeya Wyatt, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access
Variational inference of single cell time series
Bingxian Xu, Rosemary Braun
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access
Learning multi-cellular representations of single-cell transcriptomics data enables characterization of patient-level disease states
Tian-Yu Liu, Edward De Brouwer, Tony Kuo, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access
Asparagine availability controls B cell homeostasis
Yavuz F. Yazicioglu, Eros Marin, Hana F. Andrew, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 1
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