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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Comprehensive Structural Variant Detection: From Mosaic to Population-Level
Moritz Smolka, Luis F. Paulin, Christopher M. Grochowski, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2022)
Open Access | Times Cited: 91

Showing 1-25 of 91 citing articles:

Assembling the perfect bacterial genome using Oxford Nanopore and Illumina sequencing
Ryan R. Wick, Louise M. Judd, Kathryn E. Holt
PLoS Computational Biology (2023) Vol. 19, Iss. 3, pp. e1010905-e1010905
Open Access | Times Cited: 93
Scalable Nanopore sequencing of human genomes provides a comprehensive view of haplotype-resolved variation and methylation
Mikhail Kolmogorov, Kimberley Billingsley, Mira Mastoras, et al.
Nature Methods (2023) Vol. 20, Iss. 10, pp. 1483-1492
Open Access | Times Cited: 71
Assembly of 43 human Y chromosomes reveals extensive complexity and variation
Pille Hallast, Peter Ebert, Mark Loftus, et al.
Nature (2023) Vol. 621, Iss. 7978, pp. 355-364
Open Access | Times Cited: 61
Randomizing the human genome by engineering recombination between repeat elements
Jonas Koeppel, Raphaël Ferreira, Thomas Vanderstichele, et al.
Science (2025) Vol. 387, Iss. 6733
Open Access | Times Cited: 2
Inadvertent human genomic bycatch and intentional capture raise beneficial applications and ethical concerns with environmental DNA
Liam Whitmore, Mark McCauley, Jessica Farrell, et al.
Nature Ecology & Evolution (2023) Vol. 7, Iss. 6, pp. 873-888
Open Access | Times Cited: 35
The complete and fully-phased diploid genome of a male Han Chinese
Chentao Yang, Yang Zhou, Yanni Song, et al.
Cell Research (2023) Vol. 33, Iss. 10, pp. 745-761
Open Access | Times Cited: 35
Precise characterization of somatic complex structural variations from tumor/control paired long-read sequencing data with nanomonsv
Yuichi Shiraishi, Junji Koya, Kenichi Chiba, et al.
Nucleic Acids Research (2023) Vol. 51, Iss. 14, pp. e74-e74
Open Access | Times Cited: 32
Next-Generation Sequencing (NGS) and Third-Generation Sequencing (TGS) for the Diagnosis of Thalassemia
Syahzuwan Hassan, Rosnah Bahar, Muhammad Farid Johan, et al.
Diagnostics (2023) Vol. 13, Iss. 3, pp. 373-373
Open Access | Times Cited: 31
BLEND: a fast, memory-efficient and accurate mechanism to find fuzzy seed matches in genome analysis
Can Fırtına, Jisung Park, Mohammed Alser, et al.
NAR Genomics and Bioinformatics (2023) Vol. 5, Iss. 1
Open Access | Times Cited: 30
A survey of algorithms for the detection of genomic structural variants from long-read sequencing data
Mian Umair Ahsan, Qian Liu, Jonathan E. Perdomo, et al.
Nature Methods (2023) Vol. 20, Iss. 8, pp. 1143-1158
Open Access | Times Cited: 26
Graph construction method impacts variation representation and analyses in a bovine super-pangenome
Alexander S. Leonard, Danang Crysnanto, Xena Marie Mapel, et al.
Genome biology (2023) Vol. 24, Iss. 1
Open Access | Times Cited: 25
Genome‐Wide Analysis of Structural Variants in Parkinson Disease
Kimberley Billingsley, Jinhui Ding, Pilar Álvarez Jerez, et al.
Annals of Neurology (2023) Vol. 93, Iss. 5, pp. 1012-1022
Open Access | Times Cited: 23
Continuous synthesis of E. coli genome sections and Mb-scale human DNA assembly
Jérôme F. Zürcher, Askar A. Kleefeldt, Louise F. H. Funke, et al.
Nature (2023) Vol. 619, Iss. 7970, pp. 555-562
Open Access | Times Cited: 23
Rosaceae phylogenomic studies provide insights into the evolution of new genes
Lan Jiang, Xiaoxu Li, Kun Lyu, et al.
Horticultural Plant Journal (2024)
Open Access | Times Cited: 11
Endogenous retroviruses mediate transcriptional rewiring in response to oncogenic signaling in colorectal cancer
Atma M. Ivancevic, David Simpson, Olivia M. Joyner, et al.
Science Advances (2024) Vol. 10, Iss. 29
Open Access | Times Cited: 8
Randomizing the human genome by engineering recombination between repeat elements
Jonas Koeppel, Raphaël Ferreira, Thomas Vanderstichele, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 7
Scalable Nanopore sequencing of human genomes provides a comprehensive view of haplotype-resolved variation and methylation
Mikhail Kolmogorov, Kimberley Billingsley, Mira Mastoras, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 19
INSurVeyor: improving insertion calling from short read sequencing data
Ramesh Rajaby, Dongxu Liu, Chun Hang Au, et al.
Nature Communications (2023) Vol. 14, Iss. 1
Open Access | Times Cited: 18
Genome-wide structural variant analysis identifies risk loci for non-Alzheimer’s dementias
Karri Kaivola, Ruth Chia, Jinhui Ding, et al.
Cell Genomics (2023) Vol. 3, Iss. 6, pp. 100316-100316
Open Access | Times Cited: 16
Most large structural variants in cancer genomes can be detected without long reads
Zi-Ning Choo, Julie M. Behr, Aditya Deshpande, et al.
Nature Genetics (2023) Vol. 55, Iss. 12, pp. 2139-2148
Open Access | Times Cited: 16
Investigating structural variant, indel and single nucleotide polymorphism differentiation between locally adapted Atlantic salmon populations
Laurie Lecomte, Mariann Árnyasi, Anne‐Laure Ferchaud, et al.
Evolutionary Applications (2024) Vol. 17, Iss. 3
Open Access | Times Cited: 5
Whole-genome duplication increases genetic diversity and load in outcrossing Arabidopsis
Jakub Vlček, Tuomas Hämälä, Cristina Vives Cobo, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2025)
Closed Access
FINE-MAPPING OF THE TMEM106B LOCUS REVEALS FOUR HAPLOTYPES THAT ARE DIFFERENTIALLY ASSOCIATED WITH RISK FOR NEURODEGENERATION
Alex Salazar, Niccolo Tesí, Lydian Knoop, et al.
medRxiv (Cold Spring Harbor Laboratory) (2025)
Open Access
Graph-based pan-genomes: increased opportunities in plant genomics
Shuo Wang, Yong-Qing Qian, Ru-Peng Zhao, et al.
Journal of Experimental Botany (2022) Vol. 74, Iss. 1, pp. 24-39
Closed Access | Times Cited: 24
Best Practices in Microbial Experimental Evolution: Using Reporters and Long-Read Sequencing to Identify Copy Number Variation in Experimental Evolution
Pieter Spealman, Titir De, Julie N. Chuong, et al.
Journal of Molecular Evolution (2023) Vol. 91, Iss. 3, pp. 356-368
Open Access | Times Cited: 15
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