Open Access Helper

OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Omnipose: a high-precision morphology-independent solution for bacterial cell segmentation
Kevin J. Cutler, Carsen Stringer, Paul A. Wiggins, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2021)
Open Access | Times Cited: 21

Showing 21 citing articles:

Spatial omics technologies at multimodal and single cell/subcellular level
Jiwoon Park, Junbum Kim, Tyler Lewy, et al.
Genome biology (2022) Vol. 23, Iss. 1
Open Access | Times Cited: 70
DeepBacs for multi-task bacterial image analysis using open-source deep learning approaches
Christoph Spahn, Estibaliz Gómez‐de‐Mariscal, Romain F. Laine, et al.
Communications Biology (2022) Vol. 5, Iss. 1
Open Access | Times Cited: 56
Single cell metabolic imaging of tumor and immune cells in vivo in melanoma bearing mice
Alexa R. Heaton, Peter Rehani, Anna Hoefges, et al.
Frontiers in Oncology (2023) Vol. 13
Open Access | Times Cited: 16
A Foundation Model for Cell Segmentation
Uriah Israel, Markus Marks, Rohit Dilip, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 12
A benchmarked comparison of software packages for time-lapse image processing of monolayer bacterial population dynamics
Atiyeh Ahmadi, Matthew Courtney, Carolyn L. Ren, et al.
Microbiology Spectrum (2024) Vol. 12, Iss. 8
Open Access | Times Cited: 2
Synthetic Micrographs of Bacteria (SyMBac) allows accurate segmentation of bacterial cells using deep neural networks
Georgeos Hardo, Maximilian Noka, Somenath Bakshi
BMC Biology (2022) Vol. 20, Iss. 1
Open Access | Times Cited: 13
Communities of Niche-optimized Strains (CoNoS) – Design and creation of stable, genome-reduced co-cultures
Simone Schito, Rico Zuchowski, Daniel Bergen, et al.
Metabolic Engineering (2022) Vol. 73, pp. 91-103
Open Access | Times Cited: 10
Imaging-Based Screening Identifies Modulators of the eIF3 Translation Initiation Factor Complex in Candida albicans
Katura Metzner, Matthew J. O’Meara, Benjamin Halligan, et al.
Antimicrobial Agents and Chemotherapy (2023) Vol. 67, Iss. 7
Open Access | Times Cited: 5
Ribosome Phenotypes Enable Rapid Antibiotic Susceptibility Testing in Escherichia coli
Alison Farrar, Piers Turner, Hafez El Sayyed, et al.
medRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 1
High content quantitative imaging of Mycobacterium tuberculosis responses to acidic microenvironments within human macrophages
Beren Aylan, Laure Botella, Maximiliano G. Gutiérrez, et al.
FEBS Open Bio (2022) Vol. 13, Iss. 7, pp. 1204-1217
Open Access | Times Cited: 8
Tools and methods for high-throughput single-cell imaging with the mother machine
Ryan Thiermann, Michael Sandler, Gursharan Ahir, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 3
ObiWan-Microbi: OMERO-based integrated workflow for annotating microbes in the cloud
Johannes Seiffarth, Tim Scherr, Bastian Wollenhaupt, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2022)
Open Access | Times Cited: 4
Cell-TRACTR: A transformer-based model for end-to-end segmentation and tracking of cells
Owen M. O’Connor, Mary J. Dunlop
(2024)
Closed Access
Human formin FHOD3-mediated actin elongation is required for sarcomere integrity in cardiomyocytes
Dylan A Valencia, Angela N Koeberlein, Haruko Nakano, et al.
(2024)
Open Access
Human formin FHOD3-mediated actin elongation is required for sarcomere integrity in cardiomyocytes
Dylan A Valencia, Angela N Koeberlein, Haruko Nakano, et al.
(2024)
Open Access
Cell tracking for live-cell microscopy using an activity-prioritized assignment strategy
Karina Ruzaeva, Jan-Christopher Cohrs, Keitaro Kasahara, et al.
(2022)
Open Access | Times Cited: 3
Bacterial community complexity in the phyllosphere penalises specialists over generalists
R. Schlechter, Mitja N. P. Remus‐Emsermann
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 1
microbeSEG: A deep learning software tool with OMERO data management for efficient and accurate cell segmentation
Tim Scherr, Johannes Seiffarth, Bastian Wollenhaupt, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2022)
Open Access | Times Cited: 1
Imaging-based screening identifies modulators of theeIF3translation initiation factor complex inCandida albicans
Katura Metzner, Matthew J. O’Meara, Benjamin Halligan, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access
A benchmarked comparison of software packages for time-lapse image processing of monolayer bacterial population dynamics
Atiyeh Ahmadi, Matthew Courtney, Carolyn L. Ren, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access
BCM3D 2.0: Accurate segmentation of single bacterial cells in dense biofilms using computationally generated intermediate image representations
Ji Zhang, Yibo Wang, Eric D. Donarski, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2021)
Open Access | Times Cited: 1
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