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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

MCMICRO: A scalable, modular image-processing pipeline for multiplexed tissue imaging
Denis Schapiro, Artem Sokolov, Clarence Yapp, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2021)
Open Access | Times Cited: 31

Showing 1-25 of 31 citing articles:

Spatial mapping of protein composition and tissue organization: a primer for multiplexed antibody-based imaging
John W. Hickey, Elizabeth K. Neumann, Andrea J. Radtke, et al.
Nature Methods (2021) Vol. 19, Iss. 3, pp. 284-295
Open Access | Times Cited: 248
Pathogenic variants damage cell composition and single cell transcription in cardiomyopathies
Daniel Reichart, Eric L. Lindberg, Henrike Maatz, et al.
Science (2022) Vol. 377, Iss. 6606
Open Access | Times Cited: 160
Strategies for Accurate Cell Type Identification in CODEX Multiplexed Imaging Data
John W. Hickey, Yuqi Tan, Garry P. Nolan, et al.
Frontiers in Immunology (2021) Vol. 12
Open Access | Times Cited: 102
MITI minimum information guidelines for highly multiplexed tissue images
Denis Schapiro, Clarence Yapp, Artem Sokolov, et al.
Nature Methods (2022) Vol. 19, Iss. 3, pp. 262-267
Open Access | Times Cited: 63
Age-dependent regulation of SARS-CoV-2 cell entry genes and cell death programs correlates with COVID-19 severity
Zintis Inde, Ben A. Croker, Clarence Yapp, et al.
Science Advances (2021) Vol. 7, Iss. 34
Open Access | Times Cited: 61
An end-to-end workflow for multiplexed image processing and analysis
Jonas Windhager, Bernd Bodenmiller, Nils Eling
bioRxiv (Cold Spring Harbor Laboratory) (2021)
Open Access | Times Cited: 52
Multiplexed 3D atlas of state transitions and immune interactions in colorectal cancer
Jia‐Ren Lin, Shu Wang, Shannon Coy, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2021)
Open Access | Times Cited: 29
Quantifying and correcting slide-to-slide variation in multiplexed immunofluorescence images
Coleman R. Harris, Eliot T. McKinley, Joseph T. Roland, et al.
Bioinformatics (2021) Vol. 38, Iss. 6, pp. 1700-1707
Open Access | Times Cited: 27
Narrative online guides for the interpretation of digital-pathology images and tissue-atlas data
Rumana Rashid, Yu‐An Chen, John Hoffer, et al.
Nature Biomedical Engineering (2021) Vol. 6, Iss. 5, pp. 515-526
Open Access | Times Cited: 25
Stitching and registering highly multiplexed whole slide images of tissues and tumors using ASHLAR
Jeremy Muhlich, Yu‐An Chen, Clarence Yapp, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2021)
Open Access | Times Cited: 24
Scope2Screen: Focus+Context Techniques for Pathology Tumor Assessment in Multivariate Image Data
J. M. Jessup, Robert Krueger, Simon Warchol, et al.
IEEE Transactions on Visualization and Computer Graphics (2021) Vol. 28, Iss. 1, pp. 259-269
Open Access | Times Cited: 18
Spatial Morphoproteomic Features Predict Uniqueness of Immune Microarchitectures and Responses in Lymphoid Follicles
Thomas Hu, Mayar Allam, Vikram Kaushik, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 2
Single-cell spatial proteomic analysis by multiplexed imaging enables identification of microglial heterogeneity in Alzheimer’s disease human brain
Paula Sanchez-Molina, Aditya Pratapa, Nadya Nikulina, et al.
Research Square (Research Square) (2023)
Open Access | Times Cited: 4
Quality Control for Single Cell Analysis of High-plex Tissue Profiles using CyLinter
Gregory J. Baker, Edward Novikov, Ziyuan Zhao, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 4
Image Recognition and Intelligent Management of Accounting Bills Based on Image Processing Technology
Shu Chen
(2024), pp. 44-48
Closed Access | Times Cited: 1
mxnorm: An R Package to Normalize Multiplexed Imaging Data
Coleman R. Harris, Julia Wrobel, Simon Vandekar
The Journal of Open Source Software (2022) Vol. 7, Iss. 71, pp. 4180-4180
Open Access | Times Cited: 6
Matrix and analysis metadata standards (MAMS) to facilitate harmonization and reproducibility of single-cell data
Yichen Wang, Irzam Sarfraz, Wei Kheng Teh, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 3
A community-based approach to image analysis of cells, tissues and tumors
Juan C. Vizcarra, Erik Burlingame, Clemens B. Hug, et al.
Computerized Medical Imaging and Graphics (2021) Vol. 95, pp. 102013-102013
Open Access | Times Cited: 8
UnMICST: Deep learning with real augmentation for robust segmentation of highly multiplexed images of human tissues
Clarence Yapp, Edward Novikov, Won-Dong Jang, et al.
Research Square (Research Square) (2021)
Open Access | Times Cited: 7
The spatial landscape of progression and immunoediting in primary melanoma at single cell resolution
Ajit J. Nirmal, Zoltan Maliga, Tuulia Vallius, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2021)
Open Access | Times Cited: 7
HistoML, a markup language for representation and exchange of histopathological features in pathology images
Peiliang Lou, Chunbao Wang, Ruifeng Guo, et al.
Scientific Data (2022) Vol. 9, Iss. 1
Open Access | Times Cited: 4
Quantifying and correcting slide-to-slide variation in multiplexed immunofluorescence images
Coleman R. Harris, Eliot T. McKinley, Joseph T. Roland, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2021)
Open Access | Times Cited: 5
Visinity: Visual Spatial Neighborhood Analysis for Multiplexed Tissue Imaging Data
Simon Warchol, Robert Krueger, Ajit J. Nirmal, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2022)
Closed Access | Times Cited: 3
CGRA Implementation of HEVC Decoder Using Predictable Context Directed Pattern Matching With Efficient and Flexible Memory Architecture
S. Munaf, A. Bharathi, A. N. Jayanthi
Research Square (Research Square) (2024)
Open Access
WITHDRAWN: CGRA Implementation of HEVC Decoder Using Predictable Context Directed Pattern Matching With Efficient and Flexible Memory Architecture
S. Munaf, A. Bharathi, A. N. Jayanthi
Research Square (Research Square) (2024)
Closed Access
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