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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

nf-core/mag: a best-practice pipeline for metagenome hybrid assembly and binning
Sabrina Krakau, Daniel Straub, Hadrien Gourlé, et al.
NAR Genomics and Bioinformatics (2022) Vol. 4, Iss. 1
Open Access | Times Cited: 48

Showing 1-25 of 48 citing articles:

Natural products from reconstructed bacterial genomes of the Middle and Upper Paleolithic
Martin Klapper, Alexander Hübner, Anan Ibrahim, et al.
Science (2023) Vol. 380, Iss. 6645, pp. 619-624
Closed Access | Times Cited: 37
aMeta: an accurate and memory-efficient ancient metagenomic profiling workflow
Zoé Pochon, Nora Bergfeldt, Emrah Kırdök, et al.
Genome biology (2023) Vol. 24, Iss. 1
Open Access | Times Cited: 23
Community‐scale models of microbiomes: Articulating metabolic modelling and metagenome sequencing
Klara Cerk, Pablo Ugalde‐Salas, Chabname Ghassemi Nedjad, et al.
Microbial Biotechnology (2024) Vol. 17, Iss. 1
Open Access | Times Cited: 7
Sustained bacterial N2O reduction at acidic pH
Guang He, Gao Chen, Yongchao Xie, et al.
Nature Communications (2024) Vol. 15, Iss. 1
Open Access | Times Cited: 6
MuDoGeR: Multi‐Domain Genome recovery from metagenomes made easy
Ulisses Nunes da Rocha, Jonas Coelho Kasmanas, René Kallies, et al.
Molecular Ecology Resources (2023) Vol. 24, Iss. 2
Open Access | Times Cited: 12
Facilitating accessible, rapid, and appropriate processing of ancient metagenomic data with AMDirT
Maxime Borry, Adrian Forsythe, Aida Andrades Valtueña, et al.
F1000Research (2024) Vol. 12, pp. 926-926
Open Access | Times Cited: 4
Cyanochelin B: A siderophore produced by cyanobacteriumLeptolyngbyasp. NIES-3755 with photolytic properties that negate iron monopolization in the UV-light
Berness Falcao, Viviana Di Matteo, Pavel Hrouzek, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2025)
Open Access
Infection of two cestode larvae, Nybelinia enterika sp. nov. and Phoreiobothrium sp. in oval squid Sepioteuthis lessoniana species complex
Mehmet Arif Zoral, Zdeněk Lajbner, Lucia Žifčáková, et al.
Journal of Invertebrate Pathology (2025), pp. 108329-108329
Open Access
A Comprehensive Evaluation of Taxonomic Classifiers in Marine Vertebrate eDNA Studies
Philipp E. Bayer, Adam Bennett, Georgia Nester, et al.
Molecular Ecology Resources (2025)
Open Access
Presence of Fe(II) and nitrate shapes aquifer-originating communities leading to an autotrophic enrichment dominated by an Fe(II)-oxidizing Gallionellaceae sp
Natalia Jakus, Nia Blackwell, Daniel Straub, et al.
FEMS Microbiology Ecology (2021) Vol. 97, Iss. 11
Open Access | Times Cited: 25
Visualizing metagenomic and metatranscriptomic data: A comprehensive review
Eleni Aplakidou, Nikolaos Vergoulidis, Maria Chasapi, et al.
Computational and Structural Biotechnology Journal (2024) Vol. 23, pp. 2011-2033
Open Access | Times Cited: 3
Prevalence and molecular characterization of hepatitis E virus (HEV) from wild rodents in Hubei Province, China
Qingwen Ding, Bing Hu, Xuan Yao, et al.
Infection Genetics and Evolution (2024) Vol. 121, pp. 105602-105602
Open Access | Times Cited: 3
Effects of combined ciprofloxacin and Neulasta therapy on intestinal pathology and gut microbiota after high-dose irradiation in mice
Timothy S. Horseman, Andrew M. Frank, Georgetta Cannon, et al.
Frontiers in Public Health (2024) Vol. 12
Open Access | Times Cited: 3
The association between the composition of the early-life intestinal microbiome and eczema in the first year of life
Stefano Léo, Ömer Faruk Çetiner, Laure F. Pittet, et al.
Frontiers in Microbiomes (2023) Vol. 2
Open Access | Times Cited: 6
Ferroptosis, Inflammation, and Microbiome Alterations in the Intestine in the Göttingen Minipig Model of Hematopoietic-Acute Radiation Syndrome
Timothy S. Horseman, W. Bradley Rittase, John E. Slaven, et al.
International Journal of Molecular Sciences (2024) Vol. 25, Iss. 8, pp. 4535-4535
Open Access | Times Cited: 2
MAGNETO: An Automated Workflow for Genome-Resolved Metagenomics
Benjamin Churcheward, Maxime Millet, Audrey Bihouée, et al.
mSystems (2022) Vol. 7, Iss. 4
Open Access | Times Cited: 10
Metaphor—A workflow for streamlined assembly and binning of metagenomes
Vinícius Salazar, Babak Shaban, Maria del Mar Quiroga, et al.
GigaScience (2022) Vol. 12
Open Access | Times Cited: 10
Optimized Method for Bacterial Nucleic Acid Extraction from Positive Blood Culture Broth for Whole-Genome Sequencing, Resistance Phenotype Prediction, and Downstream Molecular Applications
Michelle J. Bauer, Anna Maria Peri, Lukas Lüftinger, et al.
Journal of Clinical Microbiology (2022) Vol. 60, Iss. 11
Open Access | Times Cited: 9
Metagenomic Antimicrobial Susceptibility Testing from Simulated Native Patient Samples
Lukas Lüftinger, Peter Májek, Thomas Rattei, et al.
Antibiotics (2023) Vol. 12, Iss. 2, pp. 366-366
Open Access | Times Cited: 5
Evaluation of metagenomic assembly methods for the detection and characterization of antimicrobial resistance determinants and associated mobilizable elements
Catrione Lee, Rodrigo Ortega Polo, Rahat Zaheer, et al.
Journal of Microbiological Methods (2023) Vol. 213, pp. 106815-106815
Open Access | Times Cited: 5
metagWGS, a comprehensive workflow to analyze metagenomic data using Illumina or PacBio HiFi reads
Jean Mainguy, Maïna Vienne, Joanna Fourquet, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 1
Candidatus Desulforudis audaxviator dominates a 975 m deep groundwater community in central Sweden
George Westmeijer, Femke van Dam, Riikka Kietäväinen, et al.
Communications Biology (2024) Vol. 7, Iss. 1
Open Access | Times Cited: 1
Microbiome Analysis of the Eastern Oyster As a Function of Ploidy and Seasons
Ashish Pathak, Mario Marquez, Paul Stothard, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 3
nf-core/taxprofiler: highly parallelised and flexible pipeline for metagenomic taxonomic classification and profiling
Sofia Stamouli, Moritz Emanuel Beber, Tanja Normark, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 3
Gut Microbiome Changes Occurring with Norovirus Infection and Recovery in Infants Enrolled in a Longitudinal Birth Cohort in Leon, Nicaragua
Jennifer L. Cannon, Matthew H. Seabolt, Ruijie Xu, et al.
Viruses (2022) Vol. 14, Iss. 7, pp. 1395-1395
Open Access | Times Cited: 4
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