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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

SEdb 2.0: a comprehensive super-enhancer database of human and mouse
Yuezhu Wang, Chao Song, Jun Zhao, et al.
Nucleic Acids Research (2022) Vol. 51, Iss. D1, pp. D280-D290
Open Access | Times Cited: 66

Showing 1-25 of 66 citing articles:

Randomizing the human genome by engineering recombination between repeat elements
Jonas Koeppel, Raphaël Ferreira, Thomas Vanderstichele, et al.
Science (2025) Vol. 387, Iss. 6733
Open Access | Times Cited: 2
sc2GWAS: a comprehensive platform linking single cell and GWAS traits of human
Mingxue Yin, Chenchen Feng, Zhengmin Yu, et al.
Nucleic Acids Research (2024) Vol. 53, Iss. D1, pp. D1151-D1161
Open Access | Times Cited: 12
Characterisation and reproducibility of the HumanMethylationEPIC v2.0 BeadChip for DNA methylation profiling
Timothy J. Peters, Braydon Meyer, Lauren Ryan, et al.
BMC Genomics (2024) Vol. 25, Iss. 1
Open Access | Times Cited: 11
Randomizing the human genome by engineering recombination between repeat elements
Jonas Koeppel, Raphaël Ferreira, Thomas Vanderstichele, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 7
HDAC4 influences the DNA damage response and counteracts senescence by assembling with HDAC1/HDAC2 to control H2BK120 acetylation and homology-directed repair
Eros Di Giorgio, Emiliano Dalla, Vanessa Tolotto, et al.
Nucleic Acids Research (2024) Vol. 52, Iss. 14, pp. 8218-8240
Open Access | Times Cited: 6
eRNAbase: a comprehensive database for decoding the regulatory eRNAs in human and mouse
Chao Song, Guorui Zhang, Xinxin Mu, et al.
Nucleic Acids Research (2023) Vol. 52, Iss. D1, pp. D81-D91
Open Access | Times Cited: 13
Super-Enhancers and Their Parts: From Prediction Efforts to Pathognomonic Status
Anastasia V. Vasileva, Marina G. Gladkova, German A. Ashniev, et al.
International Journal of Molecular Sciences (2024) Vol. 25, Iss. 6, pp. 3103-3103
Open Access | Times Cited: 5
Histone variant H2BE enhances chromatin accessibility in neurons to promote synaptic gene expression and long-term memory
Emily R. Feierman, Sean Louzon, Nicholas Adrian Prescott, et al.
Molecular Cell (2024) Vol. 84, Iss. 15, pp. 2822-2837.e11
Open Access | Times Cited: 5
Exploring Methylation Signatures for High De Novo Recurrence Risk in Hepatocellular carcinoma
Da-Won Kim, Jin Hyun Park, Suk Kyun Hong, et al.
Clinical and Molecular Hepatology (2025)
Open Access
Comparative study of the computer-aided design of MYCN-specific antigene oligonucleotides
Martha Hincapié-López, Efraín Pinzón-Reyes, Begonya García-Zapirain, et al.
Deleted Journal (2025), pp. 100030-100030
Open Access
Sequence-Only Prediction of Super-Enhancers in Human Cell Lines Using Transformer Models
Ekaterina V. Kravchuk, German A. Ashniev, Marina G. Gladkova, et al.
Biology (2025) Vol. 14, Iss. 2, pp. 172-172
Open Access
Potential Role of Trap Clone Accumulation Areas (TCAAs) in Sustaining Pluripotency in Mouse Embryonic Stem Cells
Masatake Araki, Lynn Kumiko Ikeda, Takumi Yonemori, et al.
Genes to Cells (2025) Vol. 30, Iss. 2
Closed Access
Exploring NamiRNA networks and time-series gene expression in osteogenic differentiation of adipose-derived stem cells
Xin Jin, Yi Lü, Zhihong Fan
Annals of Medicine (2025) Vol. 57, Iss. 1
Open Access
Mapping the evolving landscape of super-enhancers during cell differentiation
Kai Yan, Bin E. Li, Ming Zhu, et al.
Genome biology (2021) Vol. 22, Iss. 1
Open Access | Times Cited: 27
scGRN: a comprehensive single-cell gene regulatory network platform of human and mouse
Xuemei Huang, Chao Song, Guorui Zhang, et al.
Nucleic Acids Research (2023) Vol. 52, Iss. D1, pp. D293-D303
Open Access | Times Cited: 12
KnockTF 2.0: a comprehensive gene expression profile database with knockdown/knockout of transcription (co-)factors in multiple species
Chenchen Feng, Chao Song, Shuang Song, et al.
Nucleic Acids Research (2023) Vol. 52, Iss. D1, pp. D183-D193
Open Access | Times Cited: 12
CDK9 inhibition inhibits multiple oncogenic transcriptional and epigenetic pathways in prostate cancer
Razia Rahman, Muhammed H. Rahaman, Adrienne R. Hanson, et al.
British Journal of Cancer (2024) Vol. 131, Iss. 6, pp. 1092-1105
Open Access | Times Cited: 4
Regulation of Gene Expression
Carolyn M. Klinge, Barbara J. Clark
Elsevier eBooks (2024)
Closed Access | Times Cited: 4
Nuclear ANLN regulates transcription initiation related Pol II clustering and target gene expression
Yu-Fei Cao, Hui Wang, Yonghua Sun, et al.
Nature Communications (2025) Vol. 16, Iss. 1
Open Access
TRAPT: a multi-stage fused deep learning framework for predicting transcriptional regulators based on large-scale epigenomic data
Guorui Zhang, Chao Song, Mingxue Yin, et al.
Nature Communications (2025) Vol. 16, Iss. 1
Open Access
Super-enhancer mediated upregulation of MYEOV suppresses ferroptosis in lung adenocarcinoma
Shuimei Luo, Luo Yang, Ziming Wang, et al.
Cancer Letters (2024) Vol. 589, pp. 216811-216811
Closed Access | Times Cited: 3
Construction of a gene model related to the prognosis of patients with gastric cancer receiving immunotherapy and exploration of COX7A1 gene function
Siyu Wang, Yuxin Wang, Ao Shen, et al.
European journal of medical research (2024) Vol. 29, Iss. 1
Open Access | Times Cited: 3
Epigenome-wide impact of MAT2A sustains the androgen-indifferent state and confers synthetic vulnerability in ERG fusion-positive prostate cancer
Alessia Cacciatore, Dheeraj Shinde, C. Musumeci, et al.
Nature Communications (2024) Vol. 15, Iss. 1
Open Access | Times Cited: 3
Transgenerational epigenetic effects imposed by neonicotinoid thiacloprid exposure
Ouzna Dali, Shereen Cynthia D’Cruz, Louis Legoff, et al.
Life Science Alliance (2023) Vol. 7, Iss. 2, pp. e202302237-e202302237
Open Access | Times Cited: 6
A comprehensive revisit of the machine‐learning tools developed for the identification of enhancers in the human genome
Le Thi Phan, Changmin Oh, Tao He, et al.
PROTEOMICS (2023) Vol. 23, Iss. 13-14
Closed Access | Times Cited: 5
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