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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

TERA-Seq: true end-to-end sequencing of native RNA molecules for transcriptome characterization
Fadia Ibrahim, Jan Oppelt, Manolis Maragkakis, et al.
Nucleic Acids Research (2021) Vol. 49, Iss. 20, pp. e115-e115
Open Access | Times Cited: 42

Showing 1-25 of 42 citing articles:

An Introduction to Nanopore Sequencing: Past, Present, and Future Considerations
Morgan MacKenzie, Christos Argyropoulos
Micromachines (2023) Vol. 14, Iss. 2, pp. 459-459
Open Access | Times Cited: 53
CapTrap-seq: a platform-agnostic and quantitative approach for high-fidelity full-length RNA sequencing
Sílvia Carbonell Sala, Tamara Perteghella, Julien Lagarde, et al.
Nature Communications (2024) Vol. 15, Iss. 1
Open Access | Times Cited: 10
Deciphering Transcription inCryptosporidium parvum: Polycistronic Gene Expression and Chromatin Accessibility
R. Xiao, Rodrigo P. Baptista, Fiifi Agyabeng-Dadzie, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2025)
Open Access
Measuring the tail: Methods for poly(A) tail profiling
Aleksandra Brouze, Paweł S. Krawczyk, Andrzej Dziembowski, et al.
Wiley Interdisciplinary Reviews - RNA (2022) Vol. 14, Iss. 1
Open Access | Times Cited: 33
The Application of Metagenomics to Study Microbial Communities and Develop Desirable Traits in Fermented Foods
Meghana Srinivas, Órla O’Sullivan, Paul D. Cotter, et al.
Foods (2022) Vol. 11, Iss. 20, pp. 3297-3297
Open Access | Times Cited: 25
Challenges in identifying mRNA transcript starts and ends from long-read sequencing data
Ezequiel Calvo-Roitberg, Rachel F. Daniels, Athma A. Pai
Genome Research (2024) Vol. 34, Iss. 11, pp. 1719-1734
Closed Access | Times Cited: 3
Nanopore ReCappable sequencing maps SARS-CoV-2 5′ capping sites and provides new insights into the structure of sgRNAs
Camilla Ugolini, Logan Mulroney, Adrien Léger, et al.
Nucleic Acids Research (2022) Vol. 50, Iss. 6, pp. 3475-3489
Open Access | Times Cited: 18
Nanopore sequencing of internal 2′-PO4modifications installed by RNA repair
Laura K. White, Saylor M. Strugar, Andrea MacFadden, et al.
RNA (2023) Vol. 29, Iss. 6, pp. 847-861
Open Access | Times Cited: 8
Challenges in identifying mRNA transcript starts and ends from long-read sequencing data
Ezequiel Calvo-Roitberg, Rachel F. Daniels, Athma A. Pai
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 8
A ligation-independent sequencing method reveals tRNA-derived RNAs with blocked 3′ termini
Alessandro Scacchetti, Emily J. Shields, Natalie A. Trigg, et al.
Molecular Cell (2024) Vol. 84, Iss. 19, pp. 3843-3859.e8
Open Access | Times Cited: 2
Native RNA or cDNA Sequencing for Transcriptomic Analysis: A Case Study on Saccharomyces cerevisiae
Thidathip Wongsurawat, Piroon Jenjaroenpun, Visanu Wanchai, et al.
Frontiers in Bioengineering and Biotechnology (2022) Vol. 10
Open Access | Times Cited: 13
CapTrap-Seq: A platform-agnostic and quantitative approach for high-fidelity full-length RNA transcript sequencing
Sílvia Carbonell Sala, Julien Lagarde, Hiromi Nishiyori, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 6
Integrating transcription and splicing into cell fate: Transcription factors on the block
Panagiotis Boumpas, Samir Merabet, Julie Carnesecchi
Wiley Interdisciplinary Reviews - RNA (2022) Vol. 14, Iss. 2
Open Access | Times Cited: 10
Full-length direct RNA sequencing uncovers stress-granule dependent RNA decay upon cellular stress
Showkat Ahmad Dar, Sulochan Malla, Vlastimil Martinek, et al.
eLife (2024) Vol. 13
Open Access | Times Cited: 1
Decoupled degradation and translation enables noise modulation by poly(A) tails
Carmen Grandi, Martin Emmaneel, Frank H. T. Nelissen, et al.
Cell Systems (2024) Vol. 15, Iss. 6, pp. 526-543.e7
Open Access | Times Cited: 1
Nanopore guided annotation of transcriptome architectures
Jonathan S. Abebe, Yasmine Alwie, Erik Fuhrmann, et al.
mSystems (2024) Vol. 9, Iss. 7
Open Access | Times Cited: 1
Gene body DNA hydroxymethylation restricts the magnitude of transcriptional changes during aging
James R. Occean, Na Yang, Yan Sun, et al.
Nature Communications (2024) Vol. 15, Iss. 1
Open Access | Times Cited: 1
Senescence suppresses the integrated stress response and activates a stress-remodeled secretory phenotype
Matthew J. Payea, Showkat Ahmad Dar, Carlos Anerillas, et al.
Molecular Cell (2024) Vol. 84, Iss. 22, pp. 4454-4469.e7
Closed Access | Times Cited: 1
Nanoblot: an R-package for visualization of RNA isoforms from long-read RNA-sequencing data
Samuel DeMario, Kevin Xu, Kevin He, et al.
RNA (2023) Vol. 29, Iss. 8, pp. 1099-1107
Open Access | Times Cited: 4
Physiological and transcriptome analyses reveal that mid-fruit load improves the strength of source and sink in grapevine (Vitis Vinifera L.)
Yue Yuan, Juan Mao, Wenfang Li, et al.
Scientia Horticulturae (2022) Vol. 306, pp. 111479-111479
Closed Access | Times Cited: 5
Decoupled degradation and translation enables noise-modulation by poly(A)-tails
Carmen Grandi, Martin Emmaneel, Frank H. T. Nelissen, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access
Exploring the Transcriptomic Profile of Human Monkeypox Virus via CAGE and Native RNA Sequencing Approaches
Gergely Ármin Nagy, Dóra Tombácz, István Prazsák, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access
Three-dimensional cultured human umbilical cord mesenchymal stem cells attenuate pulmonary fibrosis by improving the balance of mitochondrial fusion and fission
Huifang Zhai, Mengqi Jiang, Yaqin Zhao, et al.
Stem Cells Translational Medicine (2024) Vol. 13, Iss. 9, pp. 912-926
Open Access
Characterization and implementation of the MarathonRT template-switching reaction to expand the capabilities of RNA-Seq
Litao Guo, Anastasiya Grinko, Sara Olson, et al.
RNA (2024) Vol. 30, Iss. 11, pp. 1495-1512
Open Access
Exploring the transcriptomic profile of human monkeypox virus via CAGE and native RNA sequencing approaches
Gergely Ármin Nagy, Dóra Tombácz, István Prazsák, et al.
mSphere (2024) Vol. 9, Iss. 9
Open Access
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