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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

MusiteDeep: a deep-learning based webserver for protein post-translational modification site prediction and visualization
Duolin Wang, Dongpeng Liu, Jiakang Yuchi, et al.
Nucleic Acids Research (2020) Vol. 48, Iss. W1, pp. W140-W146
Open Access | Times Cited: 204

Showing 1-25 of 204 citing articles:

Anticancer peptides prediction with deep representation learning features
Zhibin Lv, Feifei Cui, Quan Zou, et al.
Briefings in Bioinformatics (2021) Vol. 22, Iss. 5
Closed Access | Times Cited: 113
Machine learning meets omics: applications and perspectives
Rufeng Li, Lixin Li, Yungang Xu, et al.
Briefings in Bioinformatics (2021) Vol. 23, Iss. 1
Closed Access | Times Cited: 112
Protein posttranslational modifications in health and diseases: Functions, regulatory mechanisms, and therapeutic implications
Qian Zhong, Xina Xiao, Yijie Qiu, et al.
MedComm (2023) Vol. 4, Iss. 3
Open Access | Times Cited: 111
Transformer-based deep learning for predicting protein properties in the life sciences
Abel Chandra, Laura Tünnermann, Tommy Löfstedt, et al.
eLife (2023) Vol. 12
Open Access | Times Cited: 93
Biological Sequence Classification: A Review on Data and General Methods
Chunyan Ao, Shihu Jiao, Yansu Wang, et al.
Research (2022) Vol. 2022
Open Access | Times Cited: 70
GPS 6.0: an updated server for prediction of kinase-specific phosphorylation sites in proteins
Miaomiao Chen, Weizhi Zhang, Yujie Gou, et al.
Nucleic Acids Research (2023) Vol. 51, Iss. W1, pp. W243-W250
Open Access | Times Cited: 53
HLA-DQB1*05 subtypes and not DRB1*10:01 mediates risk in anti-IgLON5 disease
Selina Yogeshwar, Sergio Muñiz‐Castrillo, Lídia Sabater, et al.
Brain (2024) Vol. 147, Iss. 7, pp. 2579-2592
Closed Access | Times Cited: 15
Deep Learning in Proteomics
Bo Wen, Wen‐Feng Zeng, Yuxing Liao, et al.
PROTEOMICS (2020) Vol. 20, Iss. 21-22
Open Access | Times Cited: 127
Incorporating Machine Learning into Established Bioinformatics Frameworks
Noam Auslander, Ayal B. Gussow, Eugene V. Koonin
International Journal of Molecular Sciences (2021) Vol. 22, Iss. 6, pp. 2903-2903
Open Access | Times Cited: 85
DeepIPs: comprehensive assessment and computational identification of phosphorylation sites of SARS-CoV-2 infection using a deep learning-based approach
Hao Lv, Fanny Dao, Hasan Zulfiqar, et al.
Briefings in Bioinformatics (2021)
Open Access | Times Cited: 77
Prediction of bio-sequence modifications and the associations with diseases
Chunyan Ao, Liang Yu, Quan Zou
Briefings in Functional Genomics (2020) Vol. 20, Iss. 1, pp. 1-18
Closed Access | Times Cited: 72
Current advances in biopharmaceutical informatics: guidelines, impact and challenges in the computational developability assessment of antibody therapeutics
Rahul Khetan, Robin Curtis, Charlotte M. Deane, et al.
mAbs (2022) Vol. 14, Iss. 1
Open Access | Times Cited: 68
Applications of deep learning in understanding gene regulation
Zhongxiao Li, Elva Gao, Juexiao Zhou, et al.
Cell Reports Methods (2023) Vol. 3, Iss. 1, pp. 100384-100384
Open Access | Times Cited: 27
GPS-SUMO 2.0: an updated online service for the prediction of SUMOylation sites and SUMO-interacting motifs
Yujie Gou, Dan Liu, Miaomiao Chen, et al.
Nucleic Acids Research (2024) Vol. 52, Iss. W1, pp. W238-W247
Open Access | Times Cited: 8
SEMA 2.0: web-platform for B-cell conformational epitopes prediction using artificial intelligence
Nikita V. Ivanisenko, Tatiana Shashkova, Andrey Shevtsov, et al.
Nucleic Acids Research (2024) Vol. 52, Iss. W1, pp. W533-W539
Open Access | Times Cited: 8
Advancing the accuracy of SARS-CoV-2 phosphorylation site detection via meta-learning approach
Nhat Truong Pham, Le Thi Phan, Ji-Min Seo, et al.
Briefings in Bioinformatics (2023) Vol. 25, Iss. 1
Open Access | Times Cited: 20
A Perspective on the Prospective Use of AI in Protein Structure Prediction
Raphaëlle Versini, Sujith Sritharan, Burcu Aykaç Fas, et al.
Journal of Chemical Information and Modeling (2023) Vol. 64, Iss. 1, pp. 26-41
Open Access | Times Cited: 16
Rescoring Peptide Spectrum Matches: Boosting Proteomics Performance by Integrating Peptide Property Predictors into Peptide Identification
Mostafa Kalhor, Joel Lapin, Mario Picciani, et al.
Molecular & Cellular Proteomics (2024) Vol. 23, Iss. 7, pp. 100798-100798
Open Access | Times Cited: 7
DOTAD: A Database of Therapeutic Antibody Developability
Wenzhen Li, Hong‐Yan Lin, Ziru Huang, et al.
Interdisciplinary Sciences Computational Life Sciences (2024) Vol. 16, Iss. 3, pp. 623-634
Closed Access | Times Cited: 6
FuncPhos-STR: An integrated deep neural network for functional phosphosite prediction based on AlphaFold protein structure and dynamics
Guangyu Zhang, Cai Zhang, Mingyue Cai, et al.
International Journal of Biological Macromolecules (2024) Vol. 266, pp. 131180-131180
Closed Access | Times Cited: 6
Post-translational modification prediction via prompt-based fine-tuning of a GPT-2 model
Palistha Shrestha, Jeevan Kandel, Hilal Tayara, et al.
Nature Communications (2024) Vol. 15, Iss. 1
Open Access | Times Cited: 6
iHyd-LysSite (EPSV): Identifying Hydroxylysine Sites in Protein Using Statistical Formulation by Extracting Enhanced Position and Sequence Variant Feature Technique
Muhammad Khalid Mahmood, Asma Ehsan, Yaser Daanial Khan, et al.
Current Genomics (2020) Vol. 21, Iss. 7, pp. 536-545
Open Access | Times Cited: 44
Drug design targeting active posttranslational modification protein isoforms
Fanwang Meng, Zhongjie Liang, Kehao Zhao, et al.
Medicinal Research Reviews (2020) Vol. 41, Iss. 3, pp. 1701-1750
Closed Access | Times Cited: 42
A comprehensive review of the imbalance classification of protein post-translational modifications
Lijun Dou, Fenglong Yang, Lei Xu, et al.
Briefings in Bioinformatics (2021) Vol. 22, Iss. 5
Closed Access | Times Cited: 36
MSD2, an apoplastic Mn-SOD, contributes to root skotomorphogenic growth by modulating ROS distribution in Arabidopsis
Huize Chen, Jinsu Lee, Jungmin Lee, et al.
Plant Science (2022) Vol. 317, pp. 111192-111192
Open Access | Times Cited: 25
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