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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Long-read sequencing of the coffee bean transcriptome reveals the diversity of full-length transcripts
Bing Cheng, Agnelo Furtado, Robert J Henry
GigaScience (2017) Vol. 6, Iss. 11
Open Access | Times Cited: 101

Showing 1-25 of 101 citing articles:

Long reads: their purpose and place
Martin Pollard, Deepti Gurdasani, Alexander J. Mentzer, et al.
Human Molecular Genetics (2018) Vol. 27, Iss. R2, pp. R234-R241
Open Access | Times Cited: 316
Current Strategies of Polyploid Plant Genome Sequence Assembly
Maria Kyriakidou, Helen H. Tai, Noelle L. Anglin, et al.
Frontiers in Plant Science (2018) Vol. 9
Open Access | Times Cited: 173
Analysis of Transcriptome and Epitranscriptome in Plants Using PacBio Iso-Seq and Nanopore-Based Direct RNA Sequencing
Liangzhen Zhao, Hangxiao Zhang, Markus V. Kohnen, et al.
Frontiers in Genetics (2019) Vol. 10
Open Access | Times Cited: 151
Enzymes revolutionize the bioproduction of value-added compounds: From enzyme discovery to special applications
Birgit Wiltschi, Tomislav Cernava, Alexander Dennig, et al.
Biotechnology Advances (2020) Vol. 40, pp. 107520-107520
Open Access | Times Cited: 146
Reviving the Transcriptome Studies: An Insight Into the Emergence of Single-Molecule Transcriptome Sequencing
Bo Wang, Vivek Kumar, Andrew Olson, et al.
Frontiers in Genetics (2019) Vol. 10
Open Access | Times Cited: 125
Gene co-expression network analysis reveals coordinated regulation of three characteristic secondary biosynthetic pathways in tea plant (Camellia sinensis)
Yuling Tai, Chun Liu, Shuwei Yu, et al.
BMC Genomics (2018) Vol. 19, Iss. 1
Open Access | Times Cited: 92
A high-resolution single-molecule sequencing-based Arabidopsis transcriptome using novel methods of Iso-seq analysis
Runxuan Zhang, Richard Kuo, Max Coulter, et al.
Genome biology (2022) Vol. 23, Iss. 1
Open Access | Times Cited: 68
Isoform Sequencing and State-of-Art Applications for Unravelling Complexity of Plant Transcriptomes
Dong An, Hieu X. Cao, Changsheng Li, et al.
Genes (2018) Vol. 9, Iss. 1, pp. 43-43
Open Access | Times Cited: 67
Deciphering highly similar multigene family transcripts from Iso-Seq data with IsoCon
Kristoffer Sahlin, Marta Tomaszkiewicz, Kateryna D. Makova, et al.
Nature Communications (2018) Vol. 9, Iss. 1
Open Access | Times Cited: 63
Full-length transcriptome analysis of Litopenaeus vannamei reveals transcript variants involved in the innate immune system
Xiujuan Zhang, Guanyu Li, Haiying Jiang, et al.
Fish & Shellfish Immunology (2019) Vol. 87, pp. 346-359
Closed Access | Times Cited: 57
Long-read RNA sequencing reveals widespread sex-specific alternative splicing in threespine stickleback fish
Alice Shanfelter Naftaly, Shana H. Pau, Michael A. White
Genome Research (2021) Vol. 31, Iss. 8, pp. 1486-1497
Open Access | Times Cited: 53
The Integration of Metabolomics and Next-Generation Sequencing Data to Elucidate the Pathways of Natural Product Metabolism in Medicinal Plants
Federico Scossa, Maria Benina, Saleh Alseekh, et al.
Planta Medica (2018) Vol. 84, Iss. 12/13, pp. 855-873
Open Access | Times Cited: 56
Full-length RNA sequencing reveals unique transcriptome composition in bermudagrass
Bing Zhang, Jianxiu Liu, Xiaoshan Wang, et al.
Plant Physiology and Biochemistry (2018) Vol. 132, pp. 95-103
Closed Access | Times Cited: 54
Multiple Long-Read Sequencing Survey of Herpes Simplex Virus Dynamic Transcriptome
Dóra Tombácz, Norbert Moldován, Zsolt Balázs, et al.
Frontiers in Genetics (2019) Vol. 10
Open Access | Times Cited: 44
Isoform-resolved transcriptome of the human preimplantation embryo
Denis Torre, Nancy Francoeur, Yael Kalma, et al.
Nature Communications (2023) Vol. 14, Iss. 1
Open Access | Times Cited: 15
The complexity of the Fragaria x ananassa (octoploid) transcriptome by single-molecule long-read sequencing
Huazhao Yuan, Hongmei Yu, Tao Huang, et al.
Horticulture Research (2019) Vol. 6, Iss. 1
Open Access | Times Cited: 40
Characterization and analysis of the transcriptome in Gymnocypris selincuoensis on the Qinghai-Tibetan Plateau using single-molecule long-read sequencing and RNA-seq
Xiu Feng, Yintao Jia, Ren Zhu, et al.
DNA Research (2019) Vol. 26, Iss. 4, pp. 353-363
Open Access | Times Cited: 39
Transcriptome analysis of the induction of somatic embryogenesis in Coffea canephora and the participation of ARF and Aux/IAA genes
Ana O. Quintana-Escobar, Geovanny I. Nic-Can, Rosa María Galaz Avalos, et al.
PeerJ (2019) Vol. 7, pp. e7752-e7752
Open Access | Times Cited: 38
Progress in Plant Genome Sequencing
Robert J Henry
Applied Biosciences (2022) Vol. 1, Iss. 2, pp. 113-128
Open Access | Times Cited: 20
The coffee bean transcriptome explains the accumulation of the major bean components through ripening
Bing Cheng, Agnelo Furtado, Robert J Henry
Scientific Reports (2018) Vol. 8, Iss. 1
Open Access | Times Cited: 36
Single-molecule real-time transcript sequencing identified flowering regulatory genes in Crocus sativus
Xiaodong Qian, Youping Sun, Guifen Zhou, et al.
BMC Genomics (2019) Vol. 20, Iss. 1
Open Access | Times Cited: 32
Extending rnaSPAdes functionality for hybrid transcriptome assembly
Andrey D. Prjibelski, Giuseppe Diego Puglia, Dmitry Antipov, et al.
BMC Bioinformatics (2020) Vol. 21, Iss. S12
Open Access | Times Cited: 31
Comparative transcriptome analysis combining SMRT and NGS sequencing provides novel insights into sex differentiation and development in mud crab (Scylla paramamosain)
Jiali Lin, Xi Shi, Shaobin Fang, et al.
Aquaculture (2019) Vol. 513, pp. 734447-734447
Closed Access | Times Cited: 30
Improvements in the sequencing and assembly of plant genomes
Priyanka Sharma, Othman Al‐Dossary, Bader Alsubaie, et al.
Gigabyte (2021) Vol. 2021, pp. 1-10
Open Access | Times Cited: 26
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