OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!
If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.
Requested Article:
EMNGly: predicting N-linked glycosylation sites using the language models for feature extraction
Xiaoyang Hou, Yu Wang, Dongbo Bu, et al.
Bioinformatics (2023) Vol. 39, Iss. 11
Open Access | Times Cited: 14
Xiaoyang Hou, Yu Wang, Dongbo Bu, et al.
Bioinformatics (2023) Vol. 39, Iss. 11
Open Access | Times Cited: 14
Showing 14 citing articles:
Integrating Embeddings from Multiple Protein Language Models to Improve Protein O-GlcNAc Site Prediction
Suresh Pokharel, Pawel Pratyush, Hamid D. Ismail, et al.
International Journal of Molecular Sciences (2023) Vol. 24, Iss. 21, pp. 16000-16000
Open Access | Times Cited: 13
Suresh Pokharel, Pawel Pratyush, Hamid D. Ismail, et al.
International Journal of Molecular Sciences (2023) Vol. 24, Iss. 21, pp. 16000-16000
Open Access | Times Cited: 13
RNA Sequence Analysis Landscape: A Comprehensive Review of Task Types, Databases, Datasets, Word Embedding Methods, and Language Models
Muhammad Nabeel Asim, Muhammad Ali Ibrahim, Tayyaba Asif, et al.
Heliyon (2025) Vol. 11, Iss. 2, pp. e41488-e41488
Open Access
Muhammad Nabeel Asim, Muhammad Ali Ibrahim, Tayyaba Asif, et al.
Heliyon (2025) Vol. 11, Iss. 2, pp. e41488-e41488
Open Access
Transitioning from wet lab to artificial intelligence: a systematic review of AI predictors in CRISPR
Ahtisham Fazeel Abbasi, Muhammad Nabeel Asim, Andreas Dengel
Journal of Translational Medicine (2025) Vol. 23, Iss. 1
Open Access
Ahtisham Fazeel Abbasi, Muhammad Nabeel Asim, Andreas Dengel
Journal of Translational Medicine (2025) Vol. 23, Iss. 1
Open Access
Peptide classification landscape: An in-depth systematic literature review on peptide types, databases, datasets, predictors architectures and performance
Muhammad Nabeel Asim, Tayyaba Asif, Faiza Mehmood, et al.
Computers in Biology and Medicine (2025) Vol. 188, pp. 109821-109821
Closed Access
Muhammad Nabeel Asim, Tayyaba Asif, Faiza Mehmood, et al.
Computers in Biology and Medicine (2025) Vol. 188, pp. 109821-109821
Closed Access
Predicting C- and S-linked Glycosylation sites from protein sequences using protein language models
Md Muhaiminul Islam Nafi
Computers in Biology and Medicine (2025) Vol. 189, pp. 109956-109956
Closed Access
Md Muhaiminul Islam Nafi
Computers in Biology and Medicine (2025) Vol. 189, pp. 109956-109956
Closed Access
DNA sequence analysis landscape: a comprehensive review of DNA sequence analysis task types, databases, datasets, word embedding methods, and language models
Muhammad Nabeel Asim, Muhammad Ali Ibrahim, Alam Zaib, et al.
Frontiers in Medicine (2025) Vol. 12
Open Access
Muhammad Nabeel Asim, Muhammad Ali Ibrahim, Alam Zaib, et al.
Frontiers in Medicine (2025) Vol. 12
Open Access
Protein Representations: Encoding Biological Information for Machine Learning in Biocatalysis
David Harding-Larsen, Jonathan Funk, Niklas Gesmar Madsen, et al.
(2024)
Open Access | Times Cited: 3
David Harding-Larsen, Jonathan Funk, Niklas Gesmar Madsen, et al.
(2024)
Open Access | Times Cited: 3
ProLLM: Protein Chain-of-Thoughts Enhanced LLM for Protein-Protein Interaction Prediction
Mingyu Jin, Haochen Xue, Zhenting Wang, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 2
Mingyu Jin, Haochen Xue, Zhenting Wang, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 2
Protein representations: Encoding biological information for machine learning in biocatalysis
David Harding-Larsen, Jonathan Funk, Niklas Gesmar Madsen, et al.
Biotechnology Advances (2024) Vol. 77, pp. 108459-108459
Closed Access | Times Cited: 2
David Harding-Larsen, Jonathan Funk, Niklas Gesmar Madsen, et al.
Biotechnology Advances (2024) Vol. 77, pp. 108459-108459
Closed Access | Times Cited: 2
Comprehensive prediction and analysis of human protein essentiality based on a pre-trained protein large language model
B. S. Kang, Rui Fan, Chunmei Cui, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access
B. S. Kang, Rui Fan, Chunmei Cui, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access
Comprehensive prediction and analysis of human protein essentiality based on a pre-trained protein large language model
B. S. Kang, Rui Fan, Chunmei Cui, et al.
Research Square (Research Square) (2024)
Open Access
B. S. Kang, Rui Fan, Chunmei Cui, et al.
Research Square (Research Square) (2024)
Open Access
CoNglyPred: Accurate Prediction of N‐Linked Glycosylation Sites Using ESM‐2 and Structural Features With Graph Network and Co‐Attention
Hongmei Wang, Long Zhao, Ziyuan Yu, et al.
PROTEOMICS (2024)
Closed Access
Hongmei Wang, Long Zhao, Ziyuan Yu, et al.
PROTEOMICS (2024)
Closed Access
Advances in Prediction of Posttranslational Modification Sites Known to Localize in Protein Supersecondary Structures
Pawel Pratyush, Dukka B. KC
Methods in molecular biology (2024), pp. 117-151
Closed Access
Pawel Pratyush, Dukka B. KC
Methods in molecular biology (2024), pp. 117-151
Closed Access
Comprehensive prediction and analysis of human protein essentiality based on a pretrained large language model
B. S. Kang, Rui Fan, Chunmei Cui, et al.
Nature Computational Science (2024)
Closed Access
B. S. Kang, Rui Fan, Chunmei Cui, et al.
Nature Computational Science (2024)
Closed Access
Site-specific prediction of O-GlcNAc modification in proteins using evolutionary scale model
Ayesha Khalid, Afshan Kaleem, Wajahat M. Qazi, et al.
PLoS ONE (2024) Vol. 19, Iss. 12, pp. e0316215-e0316215
Open Access
Ayesha Khalid, Afshan Kaleem, Wajahat M. Qazi, et al.
PLoS ONE (2024) Vol. 19, Iss. 12, pp. e0316215-e0316215
Open Access
