OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!
If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.
Requested Article:
DEP2: an upgraded comprehensive analysis toolkit for quantitative proteomics data
Zhenhuan Feng, Peiyang Fang, Hui Zheng, et al.
Bioinformatics (2023) Vol. 39, Iss. 8
Open Access | Times Cited: 16
Zhenhuan Feng, Peiyang Fang, Hui Zheng, et al.
Bioinformatics (2023) Vol. 39, Iss. 8
Open Access | Times Cited: 16
Showing 16 citing articles:
Analysis and Visualization of Quantitative Proteomics Data Using FragPipe-Analyst
Yi Hsiao, Haijian Zhang, Ginny Xiaohe Li, et al.
Journal of Proteome Research (2024)
Closed Access | Times Cited: 17
Yi Hsiao, Haijian Zhang, Ginny Xiaohe Li, et al.
Journal of Proteome Research (2024)
Closed Access | Times Cited: 17
Molecular responses of Mytilus coruscus hemocytes to lipopolysaccharide and peptidoglycan as revealed by 4D-DIA based quantitative proteomics analysis
Wenhui Xiao, Fang Song, Zilin Yang, et al.
Fish & Shellfish Immunology (2025) Vol. 158, pp. 110143-110143
Closed Access
Wenhui Xiao, Fang Song, Zilin Yang, et al.
Fish & Shellfish Immunology (2025) Vol. 158, pp. 110143-110143
Closed Access
The KRAB-Zinc Finger protein ZKSCAN3 represses enhancers via embedded retrotransposons
Daniel Moore, Eugenia Wong, Charles Arnal, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2025)
Open Access
Daniel Moore, Eugenia Wong, Charles Arnal, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2025)
Open Access
ProteoArk: A One-Pot Proteomics Data Analysis and Visualization Tool for Biologists
Mahammad Nisar, Sreelakshmi Pathappillil Soman, Sourav Sreelan, et al.
Journal of Proteome Research (2025)
Closed Access
Mahammad Nisar, Sreelakshmi Pathappillil Soman, Sourav Sreelan, et al.
Journal of Proteome Research (2025)
Closed Access
irCLIP-RNP and Re-CLIP reveal patterns of dynamic protein assemblies on RNA
Luca Ducoli, Brian Zarnegar, Douglas F. Porter, et al.
Nature (2025)
Closed Access
Luca Ducoli, Brian Zarnegar, Douglas F. Porter, et al.
Nature (2025)
Closed Access
A Systems Neuroscience Approach to Diagnosis and Rehabilitation of Post COVID Neurological Syndrome Based on the Systems Neuroscience Test Battery (SNTB) Study Protocol
Tissa Wijeratne, S.G. Crewther
Neurorehabilitation (2025) Vol. 56, Iss. 1, pp. 37-47
Closed Access
Tissa Wijeratne, S.G. Crewther
Neurorehabilitation (2025) Vol. 56, Iss. 1, pp. 37-47
Closed Access
Triple role of exosomes in lung transplantation
Dingyu Rao, Defa Huang, Zhihai Peng, et al.
Frontiers in Immunology (2025) Vol. 16
Open Access
Dingyu Rao, Defa Huang, Zhihai Peng, et al.
Frontiers in Immunology (2025) Vol. 16
Open Access
Exploring the anticancer mechanism of cardiac glycosides using proteome integral solubility alteration approach
Wenjie Qin, Yinhua Deng, Huan Ren, et al.
Cancer Medicine (2024) Vol. 13, Iss. 18
Open Access | Times Cited: 2
Wenjie Qin, Yinhua Deng, Huan Ren, et al.
Cancer Medicine (2024) Vol. 13, Iss. 18
Open Access | Times Cited: 2
Characterization of effective, simple, and low‐cost precipitation methods for depleting abundant plasma proteins to enhance the depth and breadth of plasma proteomics
Shawn J. Rice, Chandra P. Belani
PROTEOMICS (2024) Vol. 24, Iss. 15
Closed Access | Times Cited: 1
Shawn J. Rice, Chandra P. Belani
PROTEOMICS (2024) Vol. 24, Iss. 15
Closed Access | Times Cited: 1
Transverse Aortic COnstriction Multi-omics Analysis (TACOMA) uncovers pathophysiological cardiac molecular mechanisms
Enio Gjerga, Matthias Dewenter, Thiago Britto‐Borges, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access
Enio Gjerga, Matthias Dewenter, Thiago Britto‐Borges, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access
PEPerMINT: Peptide Abundance Imputation in Mass Spectrometry-based Proteomics using Graph Neural Networks
Tobias Pietz, Sukrit Gupta, Christoph N. Schlaffner, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access
Tobias Pietz, Sukrit Gupta, Christoph N. Schlaffner, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access
Transverse aortic constriction multi-omics analysis uncovers pathophysiological cardiac molecular mechanisms
Enio Gjerga, Matthias Dewenter, Thiago Britto‐Borges, et al.
Database (2024) Vol. 2024
Open Access
Enio Gjerga, Matthias Dewenter, Thiago Britto‐Borges, et al.
Database (2024) Vol. 2024
Open Access
PEPerMINT: peptide abundance imputation in mass spectrometry-based proteomics using graph neural networks
Tobias Pietz, Sukrit Gupta, Christoph N. Schlaffner, et al.
Bioinformatics (2024) Vol. 40, Iss. Supplement_2, pp. ii70-ii78
Open Access
Tobias Pietz, Sukrit Gupta, Christoph N. Schlaffner, et al.
Bioinformatics (2024) Vol. 40, Iss. Supplement_2, pp. ii70-ii78
Open Access
Protocol for analysis of plasma proteomes from patients with hepatocellular carcinoma receiving combination therapy
Zhi-Feng Pan, Ling Du, Feng Liu
STAR Protocols (2024) Vol. 5, Iss. 4, pp. 103308-103308
Open Access
Zhi-Feng Pan, Ling Du, Feng Liu
STAR Protocols (2024) Vol. 5, Iss. 4, pp. 103308-103308
Open Access
Optimized protocol for the multi-omics processing of cryopreserved human kidney tissue
Sydney E. Gies, Sonja Hänzelmann, Dominik Kylies, et al.
AJP Renal Physiology (2024) Vol. 327, Iss. 5, pp. F822-F844
Closed Access
Sydney E. Gies, Sonja Hänzelmann, Dominik Kylies, et al.
AJP Renal Physiology (2024) Vol. 327, Iss. 5, pp. F822-F844
Closed Access
Reconstitution of pluripotency from mouse fibroblast through Sall4 overexpression
Lizhan Xiao, Zifen Huang, Zixuan Wu, et al.
Nature Communications (2024) Vol. 15, Iss. 1
Open Access
Lizhan Xiao, Zifen Huang, Zixuan Wu, et al.
Nature Communications (2024) Vol. 15, Iss. 1
Open Access
