OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!
If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.
Requested Article:
DeepITEH: a deep learning framework for identifying tissue-specific eRNAs from the human genome
Tianjiao Zhang, Liangyu Li, Hailong Sun, et al.
Bioinformatics (2023) Vol. 39, Iss. 6
Open Access | Times Cited: 12
Tianjiao Zhang, Liangyu Li, Hailong Sun, et al.
Bioinformatics (2023) Vol. 39, Iss. 6
Open Access | Times Cited: 12
Showing 12 citing articles:
CPPLS-MLP: a method for constructing cell–cell communication networks and identifying related highly variable genes based on single-cell sequencing and spatial transcriptomics data
Tianjiao Zhang, Zhenao Wu, Liangyu Li, et al.
Briefings in Bioinformatics (2024) Vol. 25, Iss. 3
Open Access | Times Cited: 5
Tianjiao Zhang, Zhenao Wu, Liangyu Li, et al.
Briefings in Bioinformatics (2024) Vol. 25, Iss. 3
Open Access | Times Cited: 5
RNA Sequence Analysis Landscape: A Comprehensive Review of Task Types, Databases, Datasets, Word Embedding Methods, and Language Models
Muhammad Nabeel Asim, Muhammad Ali Ibrahim, Tayyaba Asif, et al.
Heliyon (2025) Vol. 11, Iss. 2, pp. e41488-e41488
Open Access
Muhammad Nabeel Asim, Muhammad Ali Ibrahim, Tayyaba Asif, et al.
Heliyon (2025) Vol. 11, Iss. 2, pp. e41488-e41488
Open Access
DeepICSH: a complex deep learning framework for identifying cell-specific silencers and their strength from the human genome
Tianjiao Zhang, Liangyu Li, Hailong Sun, et al.
Briefings in Bioinformatics (2023) Vol. 24, Iss. 5
Closed Access | Times Cited: 9
Tianjiao Zhang, Liangyu Li, Hailong Sun, et al.
Briefings in Bioinformatics (2023) Vol. 24, Iss. 5
Closed Access | Times Cited: 9
Regulation of main ncRNAs by polyphenols: A novel anticancer therapeutic approach
Liang Zhang, Qingzheng Kang, Mengxiao Kang, et al.
Phytomedicine (2023) Vol. 120, pp. 155072-155072
Open Access | Times Cited: 9
Liang Zhang, Qingzheng Kang, Mengxiao Kang, et al.
Phytomedicine (2023) Vol. 120, pp. 155072-155072
Open Access | Times Cited: 9
Long extrachromosomal circular DNA identification by fusing sequence-derived features of physicochemical properties and nucleotide distribution patterns
Ahtisham Fazeel Abbasi, Muhammad Nabeel Asim, Sheraz Ahmed, et al.
Scientific Reports (2024) Vol. 14, Iss. 1
Open Access | Times Cited: 3
Ahtisham Fazeel Abbasi, Muhammad Nabeel Asim, Sheraz Ahmed, et al.
Scientific Reports (2024) Vol. 14, Iss. 1
Open Access | Times Cited: 3
GTAD: a graph-based approach for cell spatial composition inference from integrated scRNA-seq and ST-seq data
Tianjiao Zhang, Ziheng Zhang, Liangyu Li, et al.
Briefings in Bioinformatics (2023) Vol. 25, Iss. 1
Open Access | Times Cited: 8
Tianjiao Zhang, Ziheng Zhang, Liangyu Li, et al.
Briefings in Bioinformatics (2023) Vol. 25, Iss. 1
Open Access | Times Cited: 8
A comprehensive survey on deep learning-based identification and predicting the interaction mechanism of long non-coding RNAs
Biyu Diao, Jin Luo, Yu Guo
Briefings in Functional Genomics (2024) Vol. 23, Iss. 4, pp. 314-324
Closed Access | Times Cited: 1
Biyu Diao, Jin Luo, Yu Guo
Briefings in Functional Genomics (2024) Vol. 23, Iss. 4, pp. 314-324
Closed Access | Times Cited: 1
STPDA: Leveraging spatial-temporal patterns for downstream analysis in spatial transcriptomic data
Mingguang Shi, Xudong Cheng, Yulong Dai
Computational Biology and Chemistry (2024) Vol. 112, pp. 108127-108127
Closed Access
Mingguang Shi, Xudong Cheng, Yulong Dai
Computational Biology and Chemistry (2024) Vol. 112, pp. 108127-108127
Closed Access
GATv2EPI: Predicting Enhancer–Promoter Interactions with a Dynamic Graph Attention Network
Tianjiao Zhang, Xingjie Zhao, Hao Sun, et al.
Genes (2024) Vol. 15, Iss. 12, pp. 1511-1511
Open Access
Tianjiao Zhang, Xingjie Zhao, Hao Sun, et al.
Genes (2024) Vol. 15, Iss. 12, pp. 1511-1511
Open Access
Predicting active enhancers with DNA methylation and histone modification
Ximei Luo, Qun Li, Yifan Tang, et al.
BMC Bioinformatics (2023) Vol. 24, Iss. 1
Open Access | Times Cited: 1
Ximei Luo, Qun Li, Yifan Tang, et al.
BMC Bioinformatics (2023) Vol. 24, Iss. 1
Open Access | Times Cited: 1
iLEC-DNA: Identifying Long Extra-chromosomal Circular DNA by Fusing Sequence-derived Features of Physicochemical Properties and Nucleotide Distribution Patterns
Ahtisham Fazeel Abbasi, Muhammad Nabeel Asim, Andreas Dengel, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access
Ahtisham Fazeel Abbasi, Muhammad Nabeel Asim, Andreas Dengel, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access
iLEC-DNA: Identifying Long Extra-chromosomal Circular DNA by Fusing Sequence-derived Features of Physicochemical Properties and Nucleotide Distribution Patterns
Ahtisham Fazeel Abbasi, Muhammad Nabeel Asim, Andreas Dengel, et al.
Research Square (Research Square) (2023)
Open Access
Ahtisham Fazeel Abbasi, Muhammad Nabeel Asim, Andreas Dengel, et al.
Research Square (Research Square) (2023)
Open Access
