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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

FISHFactor: a probabilistic factor model for spatial transcriptomics data with subcellular resolution
Florin C. Walter, Oliver Stegle, Britta Velten
Bioinformatics (2023) Vol. 39, Iss. 5
Open Access | Times Cited: 15

Showing 15 citing articles:

Bento: a toolkit for subcellular analysis of spatial transcriptomics data
Clarence K. Mah, Noorsher Ahmed, Nicole A. Lopez, et al.
Genome biology (2024) Vol. 25, Iss. 1
Open Access | Times Cited: 25
Spatial multi-omics: novel tools to study the complexity of cardiovascular diseases
Paul Kießling, Christoph Kuppe
Genome Medicine (2024) Vol. 16, Iss. 1
Open Access | Times Cited: 20
Principles and challenges of modeling temporal and spatial omics data
Britta Velten, Oliver Stegle
Nature Methods (2023) Vol. 20, Iss. 10, pp. 1462-1474
Closed Access | Times Cited: 38
Spatial transcriptomics in development and disease
Ran Zhou, Gaoxia Yang, Yan Zhang, et al.
Molecular Biomedicine (2023) Vol. 4, Iss. 1
Open Access | Times Cited: 25
Enablers and challenges of spatial omics, a melting pot of technologies
Theodore Alexandrov, Julio Sáez-Rodríguez, Sinem K. Saka
Molecular Systems Biology (2023) Vol. 19, Iss. 11
Open Access | Times Cited: 17
RNA trafficking and subcellular localization—a review of mechanisms, experimental and predictive methodologies
Jun Wang, Marc Horlacher, Lixin Cheng, et al.
Briefings in Bioinformatics (2023) Vol. 24, Iss. 5
Open Access | Times Cited: 14
CellSP: Module discovery and visualization for subcellular spatial transcriptomics data
Bhavay Aggarwal, Saurabh Sinha
bioRxiv (Cold Spring Harbor Laboratory) (2025)
Open Access
Points2Regions: Fast, interactive clustering of imaging‐based spatial transcriptomics data
Axel Andersson, Andrea Beháňová, Christophe Avenel, et al.
Cytometry Part A (2024) Vol. 105, Iss. 9, pp. 677-687
Open Access | Times Cited: 3
Belayer: Modeling discrete and continuous spatial variation in gene expression from spatially resolved transcriptomics
Cong Ma, Uthsav Chitra, Shirley Zhang, et al.
Cell Systems (2022) Vol. 13, Iss. 10, pp. 786-797.e13
Open Access | Times Cited: 13
Redefining Mucosal Inflammation with Spatial Genomics
Ana J Caetano, Paul T. Sharpe
Journal of Dental Research (2024) Vol. 103, Iss. 2, pp. 129-137
Open Access | Times Cited: 2
Bering:joint cell segmentation and annotation for spatial transcriptomics with transferred graph embeddings
Kang Jin, Zuobai Zhang, Ke Zhang, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 6
Inferring Stochastic Rates from Heterogeneous Snapshots of Particle Positions
Christopher E. Miles, Scott A. McKinley, Fangyuan Ding, et al.
Bulletin of Mathematical Biology (2024) Vol. 86, Iss. 6
Closed Access | Times Cited: 1
Points2Regions: Fast Interactive Clustering ofin SituTranscriptomics Data
Axel Andersson, Andrea Beháňová, Christophe Avenel, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2022)
Open Access | Times Cited: 2
Inferring stochastic rates from heterogeneous snapshots of particle positions
Christopher E. Miles, Scott A. McKinley, Fangyuan Ding, et al.
arXiv (Cornell University) (2023)
Open Access
Discrete Representation Learning for Modeling Imaging-based Spatial Transcriptomics Data
Dig Vijay Kumar Yarlagadda, Joan Massagué, Christina Leslie
(2023), pp. 3848-3857
Closed Access
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