
OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!
If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.
Requested Article:
NerLTR-DTA: drug–target binding affinity prediction based on neighbor relationship and learning to rank
Xiaoqing Ru, Xiucai Ye, Tetsuya Sakurai, et al.
Bioinformatics (2022) Vol. 38, Iss. 7, pp. 1964-1971
Closed Access | Times Cited: 43
Xiaoqing Ru, Xiucai Ye, Tetsuya Sakurai, et al.
Bioinformatics (2022) Vol. 38, Iss. 7, pp. 1964-1971
Closed Access | Times Cited: 43
Showing 1-25 of 43 citing articles:
Potent antibiotic design via guided search from antibacterial activity evaluations
Lu Chen, Liang Yu, Lin Gao
Bioinformatics (2023) Vol. 39, Iss. 2
Open Access | Times Cited: 57
Lu Chen, Liang Yu, Lin Gao
Bioinformatics (2023) Vol. 39, Iss. 2
Open Access | Times Cited: 57
TripletMultiDTI: Multimodal representation learning in drug-target interaction prediction with triplet loss function
Alireza Dehghan, Parvin Razzaghi, Karim Abbasi, et al.
Expert Systems with Applications (2023) Vol. 232, pp. 120754-120754
Closed Access | Times Cited: 52
Alireza Dehghan, Parvin Razzaghi, Karim Abbasi, et al.
Expert Systems with Applications (2023) Vol. 232, pp. 120754-120754
Closed Access | Times Cited: 52
CCL-DTI: contributing the contrastive loss in drug–target interaction prediction
Alireza Dehghan, Karim Abbasi, Parvin Razzaghi, et al.
BMC Bioinformatics (2024) Vol. 25, Iss. 1
Open Access | Times Cited: 34
Alireza Dehghan, Karim Abbasi, Parvin Razzaghi, et al.
BMC Bioinformatics (2024) Vol. 25, Iss. 1
Open Access | Times Cited: 34
Hierarchical graph representation learning for the prediction of drug-target binding affinity
Zhaoyang Chu, Feng Huang, Haitao Fu, et al.
Information Sciences (2022) Vol. 613, pp. 507-523
Open Access | Times Cited: 46
Zhaoyang Chu, Feng Huang, Haitao Fu, et al.
Information Sciences (2022) Vol. 613, pp. 507-523
Open Access | Times Cited: 46
BiComp-DTA: Drug-target binding affinity prediction through complementary biological-related and compression-based featurization approach
Mahmood Kalemati, Mojtaba Zamani Emani, Somayyeh Koohi
PLoS Computational Biology (2023) Vol. 19, Iss. 3, pp. e1011036-e1011036
Open Access | Times Cited: 25
Mahmood Kalemati, Mojtaba Zamani Emani, Somayyeh Koohi
PLoS Computational Biology (2023) Vol. 19, Iss. 3, pp. e1011036-e1011036
Open Access | Times Cited: 25
AutoEdge-CCP: A novel approach for predicting cancer-associated circRNAs and drugs based on automated edge embedding
Yaojia Chen, Jiacheng Wang, Chunyu Wang, et al.
PLoS Computational Biology (2024) Vol. 20, Iss. 1, pp. e1011851-e1011851
Open Access | Times Cited: 13
Yaojia Chen, Jiacheng Wang, Chunyu Wang, et al.
PLoS Computational Biology (2024) Vol. 20, Iss. 1, pp. e1011851-e1011851
Open Access | Times Cited: 13
GraphCL-DTA: A Graph Contrastive Learning With Molecular Semantics for Drug-Target Binding Affinity Prediction
Xinxing Yang, Genke Yang, Jian Chu
IEEE Journal of Biomedical and Health Informatics (2024) Vol. 28, Iss. 8, pp. 4544-4552
Open Access | Times Cited: 11
Xinxing Yang, Genke Yang, Jian Chu
IEEE Journal of Biomedical and Health Informatics (2024) Vol. 28, Iss. 8, pp. 4544-4552
Open Access | Times Cited: 11
Predicting Drug-Target Interactions Over Heterogeneous Information Network
Xiaorui Su, Pengwei Hu, Hai-Cheng Yi, et al.
IEEE Journal of Biomedical and Health Informatics (2022) Vol. 27, Iss. 1, pp. 562-572
Closed Access | Times Cited: 31
Xiaorui Su, Pengwei Hu, Hai-Cheng Yi, et al.
IEEE Journal of Biomedical and Health Informatics (2022) Vol. 27, Iss. 1, pp. 562-572
Closed Access | Times Cited: 31
PASSerRank: Prediction of allosteric sites with learning to rank
Hao Tian, Sian Xiao, Xi Jiang, et al.
Journal of Computational Chemistry (2023) Vol. 44, Iss. 28, pp. 2223-2229
Open Access | Times Cited: 21
Hao Tian, Sian Xiao, Xi Jiang, et al.
Journal of Computational Chemistry (2023) Vol. 44, Iss. 28, pp. 2223-2229
Open Access | Times Cited: 21
End-to-end interpretable disease–gene association prediction
Yang Li, Zihou Guo, Keqi Wang, et al.
Briefings in Bioinformatics (2023) Vol. 24, Iss. 3
Closed Access | Times Cited: 19
Yang Li, Zihou Guo, Keqi Wang, et al.
Briefings in Bioinformatics (2023) Vol. 24, Iss. 3
Closed Access | Times Cited: 19
3DProtDTA: a deep learning model for drug-target affinity prediction based on residue-level protein graphs
Taras Voitsitskyi, Roman Stratiichuk, Ihor Koleiev, et al.
RSC Advances (2023) Vol. 13, Iss. 15, pp. 10261-10272
Open Access | Times Cited: 16
Taras Voitsitskyi, Roman Stratiichuk, Ihor Koleiev, et al.
RSC Advances (2023) Vol. 13, Iss. 15, pp. 10261-10272
Open Access | Times Cited: 16
DataDTA: a multi-feature and dual-interaction aggregation framework for drug–target binding affinity prediction
Yan Zhu, Lingling Zhao, Naifeng Wen, et al.
Bioinformatics (2023) Vol. 39, Iss. 9
Open Access | Times Cited: 16
Yan Zhu, Lingling Zhao, Naifeng Wen, et al.
Bioinformatics (2023) Vol. 39, Iss. 9
Open Access | Times Cited: 16
Optimization of drug–target affinity prediction methods through feature processing schemes
Xiaoqing Ru, Quan Zou, Chen Lin
Bioinformatics (2023) Vol. 39, Iss. 11
Open Access | Times Cited: 12
Xiaoqing Ru, Quan Zou, Chen Lin
Bioinformatics (2023) Vol. 39, Iss. 11
Open Access | Times Cited: 12
Hyperbolic matrix factorization improves prediction of drug-target associations
Aleksandar Poleksić
Scientific Reports (2023) Vol. 13, Iss. 1
Open Access | Times Cited: 11
Aleksandar Poleksić
Scientific Reports (2023) Vol. 13, Iss. 1
Open Access | Times Cited: 11
DTA-GTOmega: Enhancing Drug-Target Binding Affinity Prediction with Graph Transformers Using OmegaFold Protein Structures
Lijun Quan, Jian Wu, Yelu Jiang, et al.
Journal of Molecular Biology (2024), pp. 168843-168843
Closed Access | Times Cited: 4
Lijun Quan, Jian Wu, Yelu Jiang, et al.
Journal of Molecular Biology (2024), pp. 168843-168843
Closed Access | Times Cited: 4
MultiCycPermea: accurate and interpretable prediction of cyclic peptide permeability using a multimodal image-sequence model
Zixu Wang, Yangyang Chen, Yifan Shang, et al.
BMC Biology (2025) Vol. 23, Iss. 1
Open Access
Zixu Wang, Yangyang Chen, Yifan Shang, et al.
BMC Biology (2025) Vol. 23, Iss. 1
Open Access
Cancer Drug Sensitivity Prediction Based on Deep Transfer Learning
Weilin Meng, Xinyu Xu, Zhichao Xiao, et al.
International Journal of Molecular Sciences (2025) Vol. 26, Iss. 6, pp. 2468-2468
Open Access
Weilin Meng, Xinyu Xu, Zhichao Xiao, et al.
International Journal of Molecular Sciences (2025) Vol. 26, Iss. 6, pp. 2468-2468
Open Access
HNF-DDA: subgraph contrastive-driven transformer-style heterogeneous network embedding for drug–disease association prediction
Yifan Shang, Zixu Wang, Yangyang Chen, et al.
BMC Biology (2025) Vol. 23, Iss. 1
Open Access
Yifan Shang, Zixu Wang, Yangyang Chen, et al.
BMC Biology (2025) Vol. 23, Iss. 1
Open Access
LncRNA-disease association identification using graph auto-encoder and learning to rank
Liang Qi, Wenxiang Zhang, Hao Wu, et al.
Briefings in Bioinformatics (2022) Vol. 24, Iss. 1
Open Access | Times Cited: 15
Liang Qi, Wenxiang Zhang, Hao Wu, et al.
Briefings in Bioinformatics (2022) Vol. 24, Iss. 1
Open Access | Times Cited: 15
DeepPSE: Prediction of polypharmacy side effects by fusing deep representation of drug pairs and attention mechanism
Shenggeng Lin, Guangwei Zhang, Dong‐Qing Wei, et al.
Computers in Biology and Medicine (2022) Vol. 149, pp. 105984-105984
Closed Access | Times Cited: 13
Shenggeng Lin, Guangwei Zhang, Dong‐Qing Wei, et al.
Computers in Biology and Medicine (2022) Vol. 149, pp. 105984-105984
Closed Access | Times Cited: 13
Enhanced compound-protein binding affinity prediction by representing protein multimodal information via a coevolutionary strategy
Binjie Guo, Hanyu Zheng, Haohan Jiang, et al.
Briefings in Bioinformatics (2023) Vol. 24, Iss. 2
Open Access | Times Cited: 6
Binjie Guo, Hanyu Zheng, Haohan Jiang, et al.
Briefings in Bioinformatics (2023) Vol. 24, Iss. 2
Open Access | Times Cited: 6
Mutual-DTI: A mutual interaction feature-based neural network for drug-target protein interaction prediction
Jiahui Wen, Haitao Gan, Zhi Yong Yang, et al.
Mathematical Biosciences & Engineering (2023) Vol. 20, Iss. 6, pp. 10610-10625
Open Access | Times Cited: 5
Jiahui Wen, Haitao Gan, Zhi Yong Yang, et al.
Mathematical Biosciences & Engineering (2023) Vol. 20, Iss. 6, pp. 10610-10625
Open Access | Times Cited: 5
Prediction of drug-target interactions via neural tangent kernel extraction feature matrix factorization model
Yu Wang, Yu Zhang, Jianchun Wang, et al.
Computers in Biology and Medicine (2023) Vol. 159, pp. 106955-106955
Closed Access | Times Cited: 5
Yu Wang, Yu Zhang, Jianchun Wang, et al.
Computers in Biology and Medicine (2023) Vol. 159, pp. 106955-106955
Closed Access | Times Cited: 5
A Genetic Algorithm-Based Ensemble Learning Framework for Drug Combination Prediction
Lianlian Wu, Xiaona Ye, Yixin Zhang, et al.
Journal of Chemical Information and Modeling (2023) Vol. 63, Iss. 12, pp. 3941-3954
Closed Access | Times Cited: 5
Lianlian Wu, Xiaona Ye, Yixin Zhang, et al.
Journal of Chemical Information and Modeling (2023) Vol. 63, Iss. 12, pp. 3941-3954
Closed Access | Times Cited: 5
iSnoDi-MDRF: identifying snoRNA-disease associations based on multiple biological data by ranking framework
Wenxiang Zhang, Bin Liu
IEEE/ACM Transactions on Computational Biology and Bioinformatics (2023) Vol. 20, Iss. 5, pp. 3013-3019
Closed Access | Times Cited: 4
Wenxiang Zhang, Bin Liu
IEEE/ACM Transactions on Computational Biology and Bioinformatics (2023) Vol. 20, Iss. 5, pp. 3013-3019
Closed Access | Times Cited: 4