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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

ClassifyTE: a stacking-based prediction of hierarchical classification of transposable elements
Manisha Panta, Avdesh Mishra, Md Tamjidul Hoque, et al.
Bioinformatics (2021) Vol. 37, Iss. 17, pp. 2529-2536
Closed Access | Times Cited: 19

Showing 19 citing articles:

From tradition to innovation: conventional and deep learning frameworks in genome annotation
Zhaojia Chen, Noor ul Ain, Qian Zhao, et al.
Briefings in Bioinformatics (2024) Vol. 25, Iss. 3
Open Access | Times Cited: 9
ATTIC is an integrated approach for predicting A-to-I RNA editing sites in three species
Ruyi Chen, Fuyi Li, Xudong Guo, et al.
Briefings in Bioinformatics (2023) Vol. 24, Iss. 3
Open Access | Times Cited: 17
AGRN: accurate gene regulatory network inference using ensemble machine learning methods
Duaa Mohammad Alawad, Ataur Katebi, Md Wasi Ul Kabir, et al.
Bioinformatics Advances (2023) Vol. 3, Iss. 1
Open Access | Times Cited: 11
Near telomere-to-telomere genome assemblies of Silkie Gallus gallus and Mallard Anas platyrhynchos restored the structure of chromosomes and “missing” genes in birds
Qiangsen Zhao, Zhongtao Yin, Zhuocheng Hou
Journal of Animal Science and Biotechnology/Journal of animal science and biotechnology (2025) Vol. 16, Iss. 1
Open Access
PanTE: A Comprehensive Framework for Transposable Element Discovery in Graph-based Pangenomes
Yiwen Wang, Shuo Cao, Zhenya Liu, et al.
Research Square (Research Square) (2025)
Closed Access
Large language model applications in nucleic acid research
Lei Li, Zhao Cheng
(2025) Vol. 2, Iss. 1
Closed Access
Inpactor2: a software based on deep learning to identify and classify LTR-retrotransposons in plant genomes
Simón Orozco-Arias, Luis Humberto López-Murillo, Mariana S. Candamil-Cortés, et al.
Briefings in Bioinformatics (2022) Vol. 24, Iss. 1
Open Access | Times Cited: 18
Comprehensive Hierarchical Classification of Transposable Elements based on Deep Learning
Yang Qi, Yiqi Chen, Yingfu Wu, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 3
Teaching transposon classification as a means to crowd source the curation of repeat annotation – a tardigrade perspective
Valentina Peona, Jacopo Martelossi, Dareen Almojil, et al.
Mobile DNA (2024) Vol. 15, Iss. 1
Open Access | Times Cited: 3
Dynamics and Impacts of Transposable Element Proliferation in the Drosophila nasuta Species Group Radiation
Kevin H.-C. Wei, Dat Mai, Kamalakar Chatla, et al.
Molecular Biology and Evolution (2022) Vol. 39, Iss. 5
Open Access | Times Cited: 15
The good, the bad and the ugly of transposable elements annotation tools
Élgion L. S. Loreto, Elverson Soares de Melo, Gabriel Luz Wallau, et al.
Genetics and Molecular Biology (2023) Vol. 46, Iss. 3 suppl 1
Open Access | Times Cited: 5
Evaluating hierarchical machine learning approaches to classify biological databases
Pâmela Marinho Rezende, Joicymara S. Xavier, David B. Ascher, et al.
Briefings in Bioinformatics (2022) Vol. 23, Iss. 4
Open Access | Times Cited: 8
Transposon wave remodeled the epigenomic landscape in the rapid evolution of X-Chromosome dosage compensation
David C. H. Metzger, Imogen Porter, Brendan Mobley, et al.
Genome Research (2023) Vol. 33, Iss. 11, pp. 1917-1931
Open Access | Times Cited: 4
AnnoSINE: a short interspersed nuclear elements annotation tool for plant genomes
Yang Li, Ning Jiang, Yanni Sun
PLANT PHYSIOLOGY (2021) Vol. 188, Iss. 2, pp. 955-970
Open Access | Times Cited: 10
Machine learning accurately predicts the multivariate performance phenotype from morphology in lizards
Simon P. Lailvaux, Avdesh Mishra, Pooja Pun, et al.
PLoS ONE (2022) Vol. 17, Iss. 1, pp. e0261613-e0261613
Open Access | Times Cited: 5
Genomic object detection: An improved approach for transposable elements detection and classification using convolutional neural networks
Simón Orozco-Arias, Luis Humberto López-Murillo, Johan S. Piña, et al.
PLoS ONE (2023) Vol. 18, Iss. 9, pp. e0291925-e0291925
Open Access | Times Cited: 2
NeuralTE: an accurate approach for Transposable Element superfamily classification with multi-feature fusion
Kang Hu, Minghua Xu, Xin Gao, et al.
(2024), pp. 1-10
Open Access
Teaching transposon classification as a means to crowd source the curation of repeat annotation – a tardigrade perspective
Valentina Peona, Jacopo Martelossi, Dareen Almojil, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access
Dynamics and impacts of transposable element proliferation during the Drosophila nasuta species group radiation
Kevin H.-C. Wei, Dat Mai, Kamalakar Chatla, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2021)
Open Access
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