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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Liftoff: accurate mapping of gene annotations
Alaina Shumate, Steven L. Salzberg
Bioinformatics (2020) Vol. 37, Iss. 12, pp. 1639-1643
Open Access | Times Cited: 586

Showing 1-25 of 586 citing articles:

The complete sequence of a human genome
Sergey Nurk, Sergey Koren, Arang Rhie, et al.
Science (2022) Vol. 376, Iss. 6588, pp. 44-53
Open Access | Times Cited: 2127
A draft human pangenome reference
Wen‐Wei Liao, Mobin Asri, Jana Ebler, et al.
Nature (2023) Vol. 617, Iss. 7960, pp. 312-324
Open Access | Times Cited: 570
Automated assembly scaffolding using RagTag elevates a new tomato system for high-throughput genome editing
Michael Alonge, Ludivine Lebeigle, Melanie Kirsche, et al.
Genome biology (2022) Vol. 23, Iss. 1
Open Access | Times Cited: 450
GENCODE: reference annotation for the human and mouse genomes in 2023
Adam Frankish, Sílvia Carbonell Sala, Mark Diekhans, et al.
Nucleic Acids Research (2022) Vol. 51, Iss. D1, pp. D942-D949
Open Access | Times Cited: 359
The genetic and epigenetic landscape of the Arabidopsis centromeres
Matthew Naish, Michael Alonge, Piotr Włodzimierz, et al.
Science (2021) Vol. 374, Iss. 6569
Open Access | Times Cited: 293
The structure, function and evolution of a complete human chromosome 8
Glennis A. Logsdon, Mitchell R. Vollger, PingHsun Hsieh, et al.
Nature (2021) Vol. 593, Iss. 7857, pp. 101-107
Open Access | Times Cited: 284
Segmental duplications and their variation in a complete human genome
Mitchell R. Vollger, Xavi Guitart, Philip C. Dishuck, et al.
Science (2022) Vol. 376, Iss. 6588
Open Access | Times Cited: 247
The complete sequence of a human Y chromosome
Arang Rhie, Sergey Nurk, Monika Čechová, et al.
Nature (2023) Vol. 621, Iss. 7978, pp. 344-354
Open Access | Times Cited: 230
Protein-to-genome alignment with miniprot
Heng Li
Bioinformatics (2023) Vol. 39, Iss. 1
Open Access | Times Cited: 181
Highly contiguous assemblies of 101 drosophilid genomes
Bernard Kim, Jeremy Wang, Danny E. Miller, et al.
eLife (2021) Vol. 10
Open Access | Times Cited: 166
The complete sequence of a human genome
Sergey Nurk, Sergey Koren, Arang Rhie, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2021)
Open Access | Times Cited: 160
Curated variation benchmarks for challenging medically relevant autosomal genes
Justin Wagner, Nathan D. Olson, Lindsay Harris, et al.
Nature Biotechnology (2022) Vol. 40, Iss. 5, pp. 672-680
Open Access | Times Cited: 149
NextDenovo: an efficient error correction and accurate assembly tool for noisy long reads
Jiang Hu, Zhuo Wang, Zongyi Sun, et al.
Genome biology (2024) Vol. 25, Iss. 1
Open Access | Times Cited: 142
High-Quality Arabidopsis Thaliana Genome Assembly with Nanopore and HiFi Long Reads
Bo Wang, Xiaofei Yang, Yanyan Jia, et al.
Genomics Proteomics & Bioinformatics (2021) Vol. 20, Iss. 1, pp. 4-13
Open Access | Times Cited: 134
Predicting RNA splicing from DNA sequence using Pangolin
Tony Zeng, Yang Li
Genome biology (2022) Vol. 23, Iss. 1
Open Access | Times Cited: 115
An efficient error correction and accurate assembly tool for noisy long reads
Jiang Hu, Zhuo Wang, Zongyi Sun, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 102
The giant diploid faba genome unlocks variation in a global protein crop
Murukarthick Jayakodi, Agnieszka A. Golicz, Jonathan Kreplak, et al.
Nature (2023) Vol. 615, Iss. 7953, pp. 652-659
Open Access | Times Cited: 93
Cycles of satellite and transposon evolution in Arabidopsis centromeres
Piotr Włodzimierz, Fernando A. Rabanal, Robin Burns, et al.
Nature (2023) Vol. 618, Iss. 7965, pp. 557-565
Closed Access | Times Cited: 89
A pangenome reference of 36 Chinese populations
Yang Gao, Xiaofei Yang, Hao Chen, et al.
Nature (2023) Vol. 619, Iss. 7968, pp. 112-121
Open Access | Times Cited: 84
Chasing perfection: validation and polishing strategies for telomere-to-telomere genome assemblies
Ann M. Mc Cartney, Kishwar Shafin, Michael Alonge, et al.
Nature Methods (2022) Vol. 19, Iss. 6, pp. 687-695
Open Access | Times Cited: 74
Annelid functional genomics reveal the origins of bilaterian life cycles
Francisco M. Martín-Zamora, Yan Liang, Kero Guynes, et al.
Nature (2023) Vol. 615, Iss. 7950, pp. 105-110
Open Access | Times Cited: 61
Assembly of 43 human Y chromosomes reveals extensive complexity and variation
Pille Hallast, Peter Ebert, Mark Loftus, et al.
Nature (2023) Vol. 621, Iss. 7978, pp. 355-364
Open Access | Times Cited: 61
A near‐complete genome assembly of Brassica rapa provides new insights into the evolution of centromeres
Lei Zhang, Jianli Liang, Haixu Chen, et al.
Plant Biotechnology Journal (2023) Vol. 21, Iss. 5, pp. 1022-1032
Open Access | Times Cited: 54
The pan-genome and local adaptation of Arabidopsis thaliana
Minghui Kang, Haolin Wu, Huanhuan Liu, et al.
Nature Communications (2023) Vol. 14, Iss. 1
Open Access | Times Cited: 45
A pan-genome of 69 Arabidopsis thaliana accessions reveals a conserved genome structure throughout the global species range
Qichao Lian, Bruno Hüettel, Birgit Walkemeier, et al.
Nature Genetics (2024) Vol. 56, Iss. 5, pp. 982-991
Open Access | Times Cited: 40
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