OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!
If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.
Requested Article:
Challenges in antibody structure prediction
Monica L. Fernández‐Quintero, Janik Kokot, Franz Waibl, et al.
mAbs (2023) Vol. 15, Iss. 1
Open Access | Times Cited: 30
Monica L. Fernández‐Quintero, Janik Kokot, Franz Waibl, et al.
mAbs (2023) Vol. 15, Iss. 1
Open Access | Times Cited: 30
Showing 1-25 of 30 citing articles:
Assessing developability early in the discovery process for novel biologics
Monica L. Fernández‐Quintero, Anne Ljungars, Franz Waibl, et al.
mAbs (2023) Vol. 15, Iss. 1
Open Access | Times Cited: 42
Monica L. Fernández‐Quintero, Anne Ljungars, Franz Waibl, et al.
mAbs (2023) Vol. 15, Iss. 1
Open Access | Times Cited: 42
Adaptive immune receptor repertoire analysis
Vanessa Mhanna, Habib Bashour, Khang Lê Quý, et al.
Nature Reviews Methods Primers (2024) Vol. 4, Iss. 1
Closed Access | Times Cited: 11
Vanessa Mhanna, Habib Bashour, Khang Lê Quý, et al.
Nature Reviews Methods Primers (2024) Vol. 4, Iss. 1
Closed Access | Times Cited: 11
Biophysical cartography of the native and human-engineered antibody landscapes quantifies the plasticity of antibody developability
Habib Bashour, Eva Smorodina, Matteo Pariset, et al.
Communications Biology (2024) Vol. 7, Iss. 1
Open Access | Times Cited: 6
Habib Bashour, Eva Smorodina, Matteo Pariset, et al.
Communications Biology (2024) Vol. 7, Iss. 1
Open Access | Times Cited: 6
Challenges and compromises: Predicting unbound antibody structures with deep learning
Alexander Greenshields‐Watson, Odysseas Vavourakis, Fabian C. Spoendlin, et al.
Current Opinion in Structural Biology (2025) Vol. 90, pp. 102983-102983
Open Access
Alexander Greenshields‐Watson, Odysseas Vavourakis, Fabian C. Spoendlin, et al.
Current Opinion in Structural Biology (2025) Vol. 90, pp. 102983-102983
Open Access
Computational design and improvement of a broad influenza virus HA stem targeting antibody
Huarui Duan, Xiaojing Chi, Xue-Hua Yang, et al.
Structure (2025)
Closed Access
Huarui Duan, Xiaojing Chi, Xue-Hua Yang, et al.
Structure (2025)
Closed Access
A machine learning strategy for the identification of key in silico descriptors and prediction models for IgG monoclonal antibody developability properties
Andrew B. Waight, David Příhoda, Rojan Shrestha, et al.
mAbs (2023) Vol. 15, Iss. 1
Open Access | Times Cited: 16
Andrew B. Waight, David Příhoda, Rojan Shrestha, et al.
mAbs (2023) Vol. 15, Iss. 1
Open Access | Times Cited: 16
Structural Modeling of Nanobodies: A Benchmark of State-of-the-Art Artificial Intelligence Programs
Mario S. Valdés‐Tresanco, Mario E. Valdés‐Tresanco, Daiver E. Jiménez-Gutiérrez, et al.
Molecules (2023) Vol. 28, Iss. 10, pp. 3991-3991
Open Access | Times Cited: 15
Mario S. Valdés‐Tresanco, Mario E. Valdés‐Tresanco, Daiver E. Jiménez-Gutiérrez, et al.
Molecules (2023) Vol. 28, Iss. 10, pp. 3991-3991
Open Access | Times Cited: 15
Structural modeling of antibody variable regions using deep learning—progress and perspectives on drug discovery
Igor Jaszczyszyn, Weronika Bielska, Tomasz Gawłowski, et al.
Frontiers in Molecular Biosciences (2023) Vol. 10
Open Access | Times Cited: 14
Igor Jaszczyszyn, Weronika Bielska, Tomasz Gawłowski, et al.
Frontiers in Molecular Biosciences (2023) Vol. 10
Open Access | Times Cited: 14
Molecular surface descriptors to predict antibody developability: sensitivity to parameters, structure models, and conformational sampling
Eliott Park, Saeed Izadi
mAbs (2024) Vol. 16, Iss. 1
Open Access | Times Cited: 5
Eliott Park, Saeed Izadi
mAbs (2024) Vol. 16, Iss. 1
Open Access | Times Cited: 5
How can we discover developable antibody-based biotherapeutics?
Joschka Bauer, Nandhini Rajagopal, Priyanka Gupta, et al.
Frontiers in Molecular Biosciences (2023) Vol. 10
Open Access | Times Cited: 14
Joschka Bauer, Nandhini Rajagopal, Priyanka Gupta, et al.
Frontiers in Molecular Biosciences (2023) Vol. 10
Open Access | Times Cited: 14
Defining and Studying B Cell Receptor and TCR Interactions
C. Garrett Rappazzo, Monica L. Fernández‐Quintero, Andreas Mayer, et al.
The Journal of Immunology (2023) Vol. 211, Iss. 3, pp. 311-322
Closed Access | Times Cited: 12
C. Garrett Rappazzo, Monica L. Fernández‐Quintero, Andreas Mayer, et al.
The Journal of Immunology (2023) Vol. 211, Iss. 3, pp. 311-322
Closed Access | Times Cited: 12
Experimental Structures of Antibody/MHC-I Complexes Reveal Details of Epitopes Overlooked by Computational Prediction
Lisa F. Boyd, Jiansheng Jiang, Javeed Ahmad, et al.
The Journal of Immunology (2024) Vol. 212, Iss. 8, pp. 1366-1380
Open Access | Times Cited: 2
Lisa F. Boyd, Jiansheng Jiang, Javeed Ahmad, et al.
The Journal of Immunology (2024) Vol. 212, Iss. 8, pp. 1366-1380
Open Access | Times Cited: 2
Linguistics-based formalization of the antibody language as a basis for antibody language models
Mai Ha Vu, Philippe A. Robert, Rahmad Akbar, et al.
Nature Computational Science (2024) Vol. 4, Iss. 6, pp. 412-422
Closed Access | Times Cited: 2
Mai Ha Vu, Philippe A. Robert, Rahmad Akbar, et al.
Nature Computational Science (2024) Vol. 4, Iss. 6, pp. 412-422
Closed Access | Times Cited: 2
Allergenicity and Conformational Diversity of Allergens
Clarissa A. Seidler, Ricarda Zeindl, Monica L. Fernández‐Quintero, et al.
Allergies (2024) Vol. 4, Iss. 1, pp. 1-16
Open Access | Times Cited: 1
Clarissa A. Seidler, Ricarda Zeindl, Monica L. Fernández‐Quintero, et al.
Allergies (2024) Vol. 4, Iss. 1, pp. 1-16
Open Access | Times Cited: 1
Assessing AF2’s ability to predict structural ensembles of proteins
Jakob R. Riccabona, Fabian C. Spoendlin, Anna-Lena M. Fischer, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 1
Jakob R. Riccabona, Fabian C. Spoendlin, Anna-Lena M. Fischer, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 1
Characterization of a Novel Monoclonal Antibody with High Affinity and Specificity against Aflatoxins: A Discovery from Rosetta Antibody-Ligand Computational Simulation
Changrui Xing, Guanglei Li, Xin Zheng, et al.
Journal of Chemical Information and Modeling (2024) Vol. 64, Iss. 17, pp. 6814-6826
Closed Access | Times Cited: 1
Changrui Xing, Guanglei Li, Xin Zheng, et al.
Journal of Chemical Information and Modeling (2024) Vol. 64, Iss. 17, pp. 6814-6826
Closed Access | Times Cited: 1
Assessing AF2’s ability to predict structural ensembles of proteins
Jakob R. Riccabona, Fabian C. Spoendlin, Anna-Lena M. Fischer, et al.
Structure (2024)
Closed Access | Times Cited: 1
Jakob R. Riccabona, Fabian C. Spoendlin, Anna-Lena M. Fischer, et al.
Structure (2024)
Closed Access | Times Cited: 1
Structure and Dynamics Guiding Design of Antibody Therapeutics and Vaccines
Monica L. Fernández‐Quintero, Nancy D. Pomarici, Anna-Lena M. Fischer, et al.
Antibodies (2023) Vol. 12, Iss. 4, pp. 67-67
Open Access | Times Cited: 4
Monica L. Fernández‐Quintero, Nancy D. Pomarici, Anna-Lena M. Fischer, et al.
Antibodies (2023) Vol. 12, Iss. 4, pp. 67-67
Open Access | Times Cited: 4
Molecular Surface Descriptors to Predict Antibody Developability
Eliott Park, Saeed Izadi
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 3
Eliott Park, Saeed Izadi
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 3
Biophysical cartography of the native and human-engineered antibody landscapes quantifies the plasticity of antibody developability
Habib Bashour, Eva Smorodina, Matteo Pariset, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 2
Habib Bashour, Eva Smorodina, Matteo Pariset, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 2
Building Representation Learning Models for Antibody Comprehension
Justin Barton, Aretas Gaspariunas, Jacob D. Galson, et al.
Cold Spring Harbor Perspectives in Biology (2023) Vol. 16, Iss. 3, pp. a041462-a041462
Closed Access | Times Cited: 2
Justin Barton, Aretas Gaspariunas, Jacob D. Galson, et al.
Cold Spring Harbor Perspectives in Biology (2023) Vol. 16, Iss. 3, pp. a041462-a041462
Closed Access | Times Cited: 2
Comparison of sequence- and structure-based antibody clustering approaches on simulated repertoire sequencing data
Katharina Waury, Stefan H. Lelieveld, Sanne Abeln, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access
Katharina Waury, Stefan H. Lelieveld, Sanne Abeln, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access
Machine Learning Models for Predicting Monoclonal Antibody Biophysical Properties from Molecular Dynamics Simulations and Deep Learning-Based Surface Descriptors
I-En Wu, Lateefat Kalejaye, Pin‐Kuang Lai
Molecular Pharmaceutics (2024) Vol. 22, Iss. 1, pp. 142-153
Closed Access
I-En Wu, Lateefat Kalejaye, Pin‐Kuang Lai
Molecular Pharmaceutics (2024) Vol. 22, Iss. 1, pp. 142-153
Closed Access
Reading the repertoire: Progress in adaptive immune receptor analysis using machine learning
Timothy J O'Donnell, Chakravarthi Kanduri, Giulio Isacchini, et al.
Cell Systems (2024) Vol. 15, Iss. 12, pp. 1168-1189
Open Access
Timothy J O'Donnell, Chakravarthi Kanduri, Giulio Isacchini, et al.
Cell Systems (2024) Vol. 15, Iss. 12, pp. 1168-1189
Open Access
Protein loop structure prediction by community-based deep learning and its application to antibody CDR H3 loop modeling
Hyeonuk Woo, Yubeen Kim, Chaok Seok
PLoS Computational Biology (2024) Vol. 20, Iss. 6, pp. e1012239-e1012239
Open Access
Hyeonuk Woo, Yubeen Kim, Chaok Seok
PLoS Computational Biology (2024) Vol. 20, Iss. 6, pp. e1012239-e1012239
Open Access
