
OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!
If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.
Requested Article:
Fast Quantitative Analysis of timsTOF PASEF Data with MSFragger and IonQuant
Fengchao Yu, Sarah E. Haynes, Guo Ci Teo, et al.
Molecular & Cellular Proteomics (2020) Vol. 19, Iss. 9, pp. 1575-1585
Open Access | Times Cited: 243
Fengchao Yu, Sarah E. Haynes, Guo Ci Teo, et al.
Molecular & Cellular Proteomics (2020) Vol. 19, Iss. 9, pp. 1575-1585
Open Access | Times Cited: 243
Showing 1-25 of 243 citing articles:
An ultrapotent synthetic nanobody neutralizes SARS-CoV-2 by stabilizing inactive Spike
Michael Schoof, Bryan Faust, Reuben A. Saunders, et al.
Science (2020) Vol. 370, Iss. 6523, pp. 1473-1479
Open Access | Times Cited: 422
Michael Schoof, Bryan Faust, Reuben A. Saunders, et al.
Science (2020) Vol. 370, Iss. 6523, pp. 1473-1479
Open Access | Times Cited: 422
IonQuant Enables Accurate and Sensitive Label-Free Quantification With FDR-Controlled Match-Between-Runs
Fengchao Yu, Sarah E. Haynes, Alexey I. Nesvizhskii
Molecular & Cellular Proteomics (2021) Vol. 20, pp. 100077-100077
Open Access | Times Cited: 291
Fengchao Yu, Sarah E. Haynes, Alexey I. Nesvizhskii
Molecular & Cellular Proteomics (2021) Vol. 20, pp. 100077-100077
Open Access | Times Cited: 291
A blood atlas of COVID-19 defines hallmarks of disease severity and specificity
David Ahern, Zhichao Ai, Mark Ainsworth, et al.
Cell (2022) Vol. 185, Iss. 5, pp. 916-938.e58
Open Access | Times Cited: 254
David Ahern, Zhichao Ai, Mark Ainsworth, et al.
Cell (2022) Vol. 185, Iss. 5, pp. 916-938.e58
Open Access | Times Cited: 254
dia-PASEF data analysis using FragPipe and DIA-NN for deep proteomics of low sample amounts
Vadim Demichev, Łukasz Szyrwiel, Fengchao Yu, et al.
Nature Communications (2022) Vol. 13, Iss. 1
Open Access | Times Cited: 234
Vadim Demichev, Łukasz Szyrwiel, Fengchao Yu, et al.
Nature Communications (2022) Vol. 13, Iss. 1
Open Access | Times Cited: 234
Cancer proteogenomics: current impact and future prospects
D.R. Mani, Karsten Krug, Bing Zhang, et al.
Nature reviews. Cancer (2022) Vol. 22, Iss. 5, pp. 298-313
Closed Access | Times Cited: 147
D.R. Mani, Karsten Krug, Bing Zhang, et al.
Nature reviews. Cancer (2022) Vol. 22, Iss. 5, pp. 298-313
Closed Access | Times Cited: 147
Trapped Ion Mobility Spectrometry and Parallel Accumulation–Serial Fragmentation in Proteomics
Florian Meier, Melvin A. Park, Matthias Mann
Molecular & Cellular Proteomics (2021) Vol. 20, pp. 100138-100138
Open Access | Times Cited: 140
Florian Meier, Melvin A. Park, Matthias Mann
Molecular & Cellular Proteomics (2021) Vol. 20, pp. 100138-100138
Open Access | Times Cited: 140
Rapid and In-Depth Coverage of the (Phospho-)Proteome With Deep Libraries and Optimal Window Design for dia-PASEF
Patricia Skowronek, Marvin Thielert, Eugenia Voytik, et al.
Molecular & Cellular Proteomics (2022) Vol. 21, Iss. 9, pp. 100279-100279
Open Access | Times Cited: 122
Patricia Skowronek, Marvin Thielert, Eugenia Voytik, et al.
Molecular & Cellular Proteomics (2022) Vol. 21, Iss. 9, pp. 100279-100279
Open Access | Times Cited: 122
Deep learning the collisional cross sections of the peptide universe from a million experimental values
Florian Meier, Niklas Köhler, Andreas‐David Brunner, et al.
Nature Communications (2021) Vol. 12, Iss. 1
Open Access | Times Cited: 113
Florian Meier, Niklas Köhler, Andreas‐David Brunner, et al.
Nature Communications (2021) Vol. 12, Iss. 1
Open Access | Times Cited: 113
Analysis of DIA proteomics data using MSFragger-DIA and FragPipe computational platform
Fengchao Yu, Guo Ci Teo, Andy T. Kong, et al.
Nature Communications (2023) Vol. 14, Iss. 1
Open Access | Times Cited: 108
Fengchao Yu, Guo Ci Teo, Andy T. Kong, et al.
Nature Communications (2023) Vol. 14, Iss. 1
Open Access | Times Cited: 108
Benchmarking commonly used software suites and analysis workflows for DIA proteomics and phosphoproteomics
Ronghui Lou, Ye Cao, Shanshan Li, et al.
Nature Communications (2023) Vol. 14, Iss. 1
Open Access | Times Cited: 67
Ronghui Lou, Ye Cao, Shanshan Li, et al.
Nature Communications (2023) Vol. 14, Iss. 1
Open Access | Times Cited: 67
AlphaPept: a modern and open framework for MS-based proteomics
Maximilian T. Strauss, Isabell Bludau, Wen‐Feng Zeng, et al.
Nature Communications (2024) Vol. 15, Iss. 1
Open Access | Times Cited: 34
Maximilian T. Strauss, Isabell Bludau, Wen‐Feng Zeng, et al.
Nature Communications (2024) Vol. 15, Iss. 1
Open Access | Times Cited: 34
Structure and interactions of the endogenous human Commander complex
Saara Laulumaa, Esa‐Pekka Kumpula, Juha T. Huiskonen, et al.
Nature Structural & Molecular Biology (2024) Vol. 31, Iss. 6, pp. 925-938
Open Access | Times Cited: 19
Saara Laulumaa, Esa‐Pekka Kumpula, Juha T. Huiskonen, et al.
Nature Structural & Molecular Biology (2024) Vol. 31, Iss. 6, pp. 925-938
Open Access | Times Cited: 19
In vitro reconstitution of epigenetic reprogramming in the human germ line
Yusuke Murase, Ryuta Yokogawa, Yukihiro Yabuta, et al.
Nature (2024) Vol. 631, Iss. 8019, pp. 170-178
Open Access | Times Cited: 17
Yusuke Murase, Ryuta Yokogawa, Yukihiro Yabuta, et al.
Nature (2024) Vol. 631, Iss. 8019, pp. 170-178
Open Access | Times Cited: 17
diaTracer enables spectrum-centric analysis of diaPASEF proteomics data
Kai Li, Guo Ci Teo, Kevin Yang, et al.
Nature Communications (2025) Vol. 16, Iss. 1
Open Access | Times Cited: 1
Kai Li, Guo Ci Teo, Kevin Yang, et al.
Nature Communications (2025) Vol. 16, Iss. 1
Open Access | Times Cited: 1
Aspirin inhibits proteasomal degradation and promotes α-synuclein aggregate clearance through K63 ubiquitination
Jing Gao, Yan Liu, Chenfang Si, et al.
Nature Communications (2025) Vol. 16, Iss. 1
Open Access | Times Cited: 1
Jing Gao, Yan Liu, Chenfang Si, et al.
Nature Communications (2025) Vol. 16, Iss. 1
Open Access | Times Cited: 1
SUMOylation inhibition potentiates the glucocorticoid receptor to program growth arrest of acute lymphoblastic leukemia cells
Emma Valima, Vera Varis, Kseniia Bureiko, et al.
Oncogene (2025)
Open Access | Times Cited: 1
Emma Valima, Vera Varis, Kseniia Bureiko, et al.
Oncogene (2025)
Open Access | Times Cited: 1
Fully Automated Sample Processing and Analysis Workflow for Low-Input Proteome Profiling
Yiran Liang, Hayden Acor, Michaela A. McCown, et al.
Analytical Chemistry (2020) Vol. 93, Iss. 3, pp. 1658-1666
Open Access | Times Cited: 102
Yiran Liang, Hayden Acor, Michaela A. McCown, et al.
Analytical Chemistry (2020) Vol. 93, Iss. 3, pp. 1658-1666
Open Access | Times Cited: 102
Proteomes Are of Proteoforms: Embracing the Complexity
Katrina Carbonara, Martin Andonovski, Jens R. Coorssen
Proteomes (2021) Vol. 9, Iss. 3, pp. 38-38
Open Access | Times Cited: 77
Katrina Carbonara, Martin Andonovski, Jens R. Coorssen
Proteomes (2021) Vol. 9, Iss. 3, pp. 38-38
Open Access | Times Cited: 77
High-end ion mobility mass spectrometry: A current review of analytical capacity in omics applications and structural investigations
Daniel G. Delafield, Gaoyuan Lu, Cameron J. Kaminsky, et al.
TrAC Trends in Analytical Chemistry (2022) Vol. 157, pp. 116761-116761
Open Access | Times Cited: 52
Daniel G. Delafield, Gaoyuan Lu, Cameron J. Kaminsky, et al.
TrAC Trends in Analytical Chemistry (2022) Vol. 157, pp. 116761-116761
Open Access | Times Cited: 52
Physical and functional interactome atlas of human receptor tyrosine kinases
Kari Salokas, Xiaonan Liu, Tiina Öhman, et al.
EMBO Reports (2022) Vol. 23, Iss. 6
Open Access | Times Cited: 45
Kari Salokas, Xiaonan Liu, Tiina Öhman, et al.
EMBO Reports (2022) Vol. 23, Iss. 6
Open Access | Times Cited: 45
Spatially resolved proteomics via tissue expansion
Lu Li, Cuiji Sun, Yaoting Sun, et al.
Nature Communications (2022) Vol. 13, Iss. 1
Open Access | Times Cited: 37
Lu Li, Cuiji Sun, Yaoting Sun, et al.
Nature Communications (2022) Vol. 13, Iss. 1
Open Access | Times Cited: 37
midiaPASEF maximizes information content in data-independent acquisition proteomics
Ute Distler, Mateusz Krzysztof Łącki, Michał Startek, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 34
Ute Distler, Mateusz Krzysztof Łącki, Michał Startek, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 34
prolfqua: A Comprehensive R-Package for Proteomics Differential Expression Analysis
Witold Wolski, Paolo Nanni, Jonas Grossmann, et al.
Journal of Proteome Research (2023) Vol. 22, Iss. 4, pp. 1092-1104
Open Access | Times Cited: 29
Witold Wolski, Paolo Nanni, Jonas Grossmann, et al.
Journal of Proteome Research (2023) Vol. 22, Iss. 4, pp. 1092-1104
Open Access | Times Cited: 29
Sensitive, High-Throughput HLA-I and HLA-II Immunopeptidomics Using Parallel Accumulation-Serial Fragmentation Mass Spectrometry
Kshiti Meera Phulphagar, Claudia Ctortecka, Alvaro Sebastian Vaca Jacome, et al.
Molecular & Cellular Proteomics (2023) Vol. 22, Iss. 6, pp. 100563-100563
Open Access | Times Cited: 29
Kshiti Meera Phulphagar, Claudia Ctortecka, Alvaro Sebastian Vaca Jacome, et al.
Molecular & Cellular Proteomics (2023) Vol. 22, Iss. 6, pp. 100563-100563
Open Access | Times Cited: 29
Ion Mobility Mass Spectrometry for the Separation and Characterization of Small Molecules
Longchan Liu, Ziying Wang, Qian Zhang, et al.
Analytical Chemistry (2023) Vol. 95, Iss. 1, pp. 134-151
Closed Access | Times Cited: 27
Longchan Liu, Ziying Wang, Qian Zhang, et al.
Analytical Chemistry (2023) Vol. 95, Iss. 1, pp. 134-151
Closed Access | Times Cited: 27