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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Non-Markovian modeling of protein folding
Cihan Ayaz, Lucas Tepper, Florian N. Brünig, et al.
Proceedings of the National Academy of Sciences (2021) Vol. 118, Iss. 31
Open Access | Times Cited: 88

Showing 1-25 of 88 citing articles:

MoDAFold: a strategy for predicting the structure of missense mutant protein based on AlphaFold2 and molecular dynamics
Lingyan Zheng, Shuiyang Shi, Xiuna Sun, et al.
Briefings in Bioinformatics (2024) Vol. 25, Iss. 2
Open Access | Times Cited: 19
Generalized Langevin equation with a nonlinear potential of mean force and nonlinear memory friction from a hybrid projection scheme
Cihan Ayaz, Laura Scalfi, Benjamin A. Dalton, et al.
Physical review. E (2022) Vol. 105, Iss. 5
Open Access | Times Cited: 52
Likelihood-based non-Markovian models from molecular dynamics
Hadrien Vroylandt, Ludovic Goudenège, Pierre Monmarché, et al.
Proceedings of the National Academy of Sciences (2022) Vol. 119, Iss. 13
Open Access | Times Cited: 40
Anomalous diffusion, nonergodicity, non-Gaussianity, and aging of fractional Brownian motion with nonlinear clocks
Yingjie Liang, Wei Wang, Ralf Metzler, et al.
Physical review. E (2023) Vol. 108, Iss. 3
Closed Access | Times Cited: 33
Fast protein folding is governed by memory-dependent friction
Benjamin A. Dalton, Cihan Ayaz, Henrik Kiefer, et al.
Proceedings of the National Academy of Sciences (2023) Vol. 120, Iss. 31
Open Access | Times Cited: 23
Mechanism of DNA origami folding elucidated by mesoscopic simulations
Marcello DeLuca, Daniel Linden Duke, Tao Ye, et al.
Nature Communications (2024) Vol. 15, Iss. 1
Open Access | Times Cited: 13
Dynamics of Microscale and Nanoscale Systems in the Weak-Memory Regime
Kay Brandner
Physical Review Letters (2025) Vol. 134, Iss. 3
Open Access | Times Cited: 1
Dynamics of microscale and nanoscale systems in the weak-memory regime: A mathematical framework beyond the Markov approximation
Kay Brandner
Physical review. E (2025) Vol. 111, Iss. 1
Open Access | Times Cited: 1
Position-dependent memory kernel in generalized Langevin equations: Theory and numerical estimation
Hadrien Vroylandt, Pierre Monmarché
The Journal of Chemical Physics (2022) Vol. 156, Iss. 24
Open Access | Times Cited: 33
Building insightful, memory-enriched models to capture long-time biochemical processes from short-time simulations
Anthony J. Dominic, Thomas Sayer, Siqin Cao, et al.
Proceedings of the National Academy of Sciences (2023) Vol. 120, Iss. 12
Open Access | Times Cited: 21
Anisotropic Friction in a Ligand-Protein Complex
Wanhao Cai, Miriam Jäger, Jakob Tómas Bullerjahn, et al.
Nano Letters (2023) Vol. 23, Iss. 10, pp. 4111-4119
Open Access | Times Cited: 20
Integrative generalized master equation: A method to study long-timescale biomolecular dynamics via the integrals of memory kernels
Siqin Cao, Yunrui Qiu, Michael L. Kalin, et al.
The Journal of Chemical Physics (2023) Vol. 159, Iss. 13
Closed Access | Times Cited: 20
Memory Unlocks the Future of Biomolecular Dynamics: Transformative Tools to Uncover Physical Insights Accurately and Efficiently
Anthony J. Dominic, Siqin Cao, Andrés Montoya−Castillo, et al.
Journal of the American Chemical Society (2023) Vol. 145, Iss. 18, pp. 9916-9927
Closed Access | Times Cited: 19
Overcoming the timescale barrier in molecular dynamics: Transfer operators, variational principles and machine learning
Christof Schütte, Stefan Klus, Carsten Hartmann
Acta Numerica (2023) Vol. 32, pp. 517-673
Open Access | Times Cited: 18
Effective mass approach to memory in non-Markovian systems
M. Wiśniewski, J. Łuczka, Jakub Spiechowicz
Physical review. E (2024) Vol. 109, Iss. 4
Open Access | Times Cited: 7
Accurate estimates of dynamical statistics using memory
Chatipat Lorpaiboon, Spencer C. Guo, John Strahan, et al.
The Journal of Chemical Physics (2024) Vol. 160, Iss. 8
Open Access | Times Cited: 6
Tutorial on how to build non-Markovian dynamic models from molecular dynamics simulations for studying protein conformational changes
Yue Wu, Siqin Cao, Yunrui Qiu, et al.
The Journal of Chemical Physics (2024) Vol. 160, Iss. 12
Open Access | Times Cited: 6
The role of memory-dependent friction and solvent viscosity in isomerization kinetics in viscogenic media
Benjamin A. Dalton, Henrik Kiefer, Roland R. Netz
Nature Communications (2024) Vol. 15, Iss. 1
Open Access | Times Cited: 6
Derivation of the nonequilibrium generalized Langevin equation from a time-dependent many-body Hamiltonian
Roland R. Netz
Physical review. E (2024) Vol. 110, Iss. 1
Open Access | Times Cited: 6
pH Modulates Friction Memory Effects in Protein Folding
Benjamin A. Dalton, Roland R. Netz
Physical Review Letters (2024) Vol. 133, Iss. 18
Open Access | Times Cited: 4
Effect of frequency-dependent shear and volume viscosities on molecular friction in liquids
Henrik Kiefer, Domenico Vitali, Benjamin A. Dalton, et al.
Physical review. E (2025) Vol. 111, Iss. 1
Open Access
Cross-correlations in the fluctuation–dissipation relation influence barrier-crossing dynamics
Niklas Wolf, Viktor Klippenstein, Nico F. A. van der Vegt
The Journal of Chemical Physics (2025) Vol. 162, Iss. 5
Open Access
Hydrogen bonds vs RMSD: Geometric reaction coordinates for protein folding
Y. Kasprzak, J. Rückert, N. Ludolph, et al.
The Journal of Chemical Physics (2025) Vol. 162, Iss. 7
Closed Access
Markov-Type State Models to Describe Non-Markovian Dynamics
Sofia Sartore, Franziska Teichmann, Gerhard Stock
Journal of Chemical Theory and Computation (2025)
Open Access
Targeting Bacterial RNA Polymerase: Harnessing Simulations and Machine Learning to Design Inhibitors for Drug-Resistant Pathogens
Eshani C. Goonetilleke, Xuhui Huang
Biochemistry (2025)
Closed Access
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