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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

I-TASSER-MTD: a deep-learning-based platform for multi-domain protein structure and function prediction
Xiaogen Zhou, Wei Zheng, Yang Li, et al.
Nature Protocols (2022) Vol. 17, Iss. 10, pp. 2326-2353
Closed Access | Times Cited: 304

Showing 1-25 of 304 citing articles:

In silico antiviral effect assessment of some venom gland peptides from Odontobuthus doriae scorpion against SARS-CoV-2
Maryam Naderi Soorki
Toxicon (2025), pp. 108229-108229
Closed Access | Times Cited: 1
Protein structure and folding pathway prediction based on remote homologs recognition using PAthreader
Kailong Zhao, Yuhao Xia, Fujin Zhang, et al.
Communications Biology (2023) Vol. 6, Iss. 1
Open Access | Times Cited: 30
Tertiary structure assessment at CASP15
Adam J. Simpkin, Shahram Mesdaghi, Filomeno Sánchez Rodríguez, et al.
Proteins Structure Function and Bioinformatics (2023) Vol. 91, Iss. 12, pp. 1616-1635
Open Access | Times Cited: 29
CRISPR/Cas9 screen uncovers functional translation of cryptic lncRNA-encoded open reading frames in human cancer
Caishang Zheng, Yanjun Wei, Peng Zhang, et al.
Journal of Clinical Investigation (2023) Vol. 133, Iss. 5
Open Access | Times Cited: 23
Recent Progress of Protein Tertiary Structure Prediction
Qiqige Wuyun, Yihan Chen, Yifeng Shen, et al.
Molecules (2024) Vol. 29, Iss. 4, pp. 832-832
Open Access | Times Cited: 13
Double phage displayed peptides co-targeting-based biosensor with signal enhancement activity for colorimetric detection of Staphylococcus aureus
Shang Wu, Lina Sheng, Guocheng Kou, et al.
Biosensors and Bioelectronics (2024) Vol. 249, pp. 116005-116005
Closed Access | Times Cited: 12
ECOD domain classification of 48 whole proteomes from AlphaFold Structure Database using DPAM2
R. Dustin Schaeffer, Jing Zhang, Kirill E. Medvedev, et al.
PLoS Computational Biology (2024) Vol. 20, Iss. 2, pp. e1011586-e1011586
Open Access | Times Cited: 12
AI-Driven Deep Learning Techniques in Protein Structure Prediction
Lingtao Chen, Qiaomu Li, Kazi Fahim Ahmad Nasif, et al.
International Journal of Molecular Sciences (2024) Vol. 25, Iss. 15, pp. 8426-8426
Open Access | Times Cited: 10
Enhancing Antimicrobial Peptide Activity through Modifications of Charge, Hydrophobicity, and Structure
Przemysław Gagat, Michał Ostrówka, Anna Duda-Madej, et al.
International Journal of Molecular Sciences (2024) Vol. 25, Iss. 19, pp. 10821-10821
Open Access | Times Cited: 10
A Perspective on Protein Structure Prediction Using Quantum Computers
Hakan Doğa, Bryan Raubenolt, Fabio Cumbo, et al.
Journal of Chemical Theory and Computation (2024) Vol. 20, Iss. 9, pp. 3359-3378
Open Access | Times Cited: 9
Designing a smallpox B-cell and T-cell multi-epitope subunit vaccine using a comprehensive immunoinformatics approach
Changqing Yu, Qi Wu, Jiuqing Xin, et al.
Microbiology Spectrum (2024) Vol. 12, Iss. 6
Open Access | Times Cited: 8
Large language models in bioinformatics: applications and perspectives
Jiajia Liu, Mengyuan Yang, Yankai Yu, et al.
arXiv (Cornell University) (2024)
Open Access | Times Cited: 7
Multi-domain and complex protein structure prediction using inter-domain interactions from deep learning
Yuhao Xia, Kailong Zhao, Dong Liu, et al.
Communications Biology (2023) Vol. 6, Iss. 1
Open Access | Times Cited: 20
The current role and evolution of X-ray crystallography in drug discovery and development
Vanessa Bijak, Michal Szczygiel, Joanna Lenkiewicz, et al.
Expert Opinion on Drug Discovery (2023) Vol. 18, Iss. 11, pp. 1221-1230
Open Access | Times Cited: 17
Computational Chemistry in Structure-Based Solute Carrier Transporter Drug Design: Recent Advances and Future Perspectives
Gao Tu, Tingting Fu, Guoxun Zheng, et al.
Journal of Chemical Information and Modeling (2024) Vol. 64, Iss. 5, pp. 1433-1455
Closed Access | Times Cited: 7
DEMO-EM2: assembling protein complex structures from cryo-EM maps through intertwined chain and domain fitting
Ziying Zhang, Yaxian Cai, Biao Zhang, et al.
Briefings in Bioinformatics (2024) Vol. 25, Iss. 2
Open Access | Times Cited: 7
Advancing PEDV Vaccination: Comparison between Inactivated and Flagellin N-Terminus-Adjuvanted Subunit Vaccines
Asad Murtaza, Nguyen-Thanh Hoa, Do Dieu-Huong, et al.
Vaccines (2024) Vol. 12, Iss. 2, pp. 139-139
Open Access | Times Cited: 6
Identification and prioritisation of potential vaccine candidates using subtractive proteomics and designing of a multi-epitope vaccine against Wuchereria bancrofti
Murali Aarthy, G. Navaneetha Pandiyan, R Paramasivan, et al.
Scientific Reports (2024) Vol. 14, Iss. 1
Open Access | Times Cited: 5
A novel thermostable YtnP lactonase from Stenotrophomonas maltophilia inhibits Pseudomonas aeruginosa virulence in vitro and in vivo
Jovana Curcic, Miroslav Dinić, Katarina Novović, et al.
International Journal of Biological Macromolecules (2024) Vol. 264, pp. 130421-130421
Open Access | Times Cited: 5
Enhancing the Catalytic Activity of Geranylgeranyl Diphosphate Synthase through Ancestral Sequence Reconstruction and Semirational Design
Yidong Wang, Yunpeng Shen, Longyun Cao, et al.
Journal of Agricultural and Food Chemistry (2024) Vol. 72, Iss. 34, pp. 19187-19196
Closed Access | Times Cited: 5
Genomic profiling and molecular dynamics analysis of parDE Pa toxin-antitoxin homologs targeting DNA gyrase in Pseudomonas aeruginosa : insights from computational investigations
Nomita Gupta, Mohit Yadav, Waseem Ali, et al.
Journal of Biomolecular Structure and Dynamics (2025), pp. 1-17
Closed Access
DPFunc: accurately predicting protein function via deep learning with domain-guided structure information
Wenkang Wang, Yunyan Shuai, Min Zeng, et al.
Nature Communications (2025) Vol. 16, Iss. 1
Open Access
Development of the lentivirusbased vector system for ectopic expression and presentation of the melanoma antigen MLANA in human cells
Natalia Antonevich, I. A. Badalyan, Andrei Hancharou, et al.
Doklady of the National Academy of Sciences of Belarus (2025) Vol. 68, Iss. 6, pp. 465-473
Open Access
AlphaFold and what is next: bridging functional, systems and structural biology
Kacper Szczepski, Łukasz Jaremko
Expert Review of Proteomics (2025)
Closed Access
Fundamentals of molecular dynamics for antimicrobial peptides’ discovery
Juan C. Burgos, José Antonio Fernández Avilés
Elsevier eBooks (2025), pp. 37-57
Closed Access
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