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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Tutorial: guidelines for the computational analysis of single-cell RNA sequencing data
Tallulah Andrews, Vladimir Yu Kiselev, Davis J. McCarthy, et al.
Nature Protocols (2020) Vol. 16, Iss. 1, pp. 1-9
Closed Access | Times Cited: 239

Showing 1-25 of 239 citing articles:

Statistics or biology: the zero-inflation controversy about scRNA-seq data
Ruochen Jiang, Tianyi Sun, Dongyuan Song, et al.
Genome biology (2022) Vol. 23, Iss. 1
Open Access | Times Cited: 425
Single-cell atlases: shared and tissue-specific cell types across human organs
Rasa Elmentaite, Cecilia Domínguez Conde, Lu Yang, et al.
Nature Reviews Genetics (2022) Vol. 23, Iss. 7, pp. 395-410
Closed Access | Times Cited: 120
Over 1000 tools reveal trends in the single-cell RNA-seq analysis landscape
Luke Zappia, Fabian J. Theis
Genome biology (2021) Vol. 22, Iss. 1
Open Access | Times Cited: 112
Recent developments in application of single-cell RNA sequencing in the tumour immune microenvironment and cancer therapy
Peiheng Li, Xiangyu Kong, Yazhou He, et al.
Military Medical Research (2022) Vol. 9, Iss. 1
Open Access | Times Cited: 82
Liver zonation, revisited
J Paris, Neil C. Henderson
Hepatology (2022) Vol. 76, Iss. 4, pp. 1219-1230
Open Access | Times Cited: 79
Single-cell immunology: Past, present, and future
Florent Ginhoux, Adam Yalin, Charles‐Antoine Dutertre, et al.
Immunity (2022) Vol. 55, Iss. 3, pp. 393-404
Open Access | Times Cited: 65
Cell–cell communication inference and analysis in the tumour microenvironments from single-cell transcriptomics: data resources and computational strategies
Lihong Peng, Feixiang Wang, Zhao Wang, et al.
Briefings in Bioinformatics (2022) Vol. 23, Iss. 4
Closed Access | Times Cited: 64
Advancing CAR T cell therapy through the use of multidimensional omics data
Jingwen Yang, Yamei Chen, Ying Jing, et al.
Nature Reviews Clinical Oncology (2023) Vol. 20, Iss. 4, pp. 211-228
Closed Access | Times Cited: 63
The implications of single-cell RNA-seq analysis in prostate cancer: unraveling tumor heterogeneity, therapeutic implications and pathways towards personalized therapy
Dechao Feng, Weizhen Zhu, Jie Wang, et al.
Military Medical Research (2024) Vol. 11, Iss. 1
Open Access | Times Cited: 20
scvi-tools: a library for deep probabilistic analysis of single-cell omics data
Adam Gayoso, Romain Lopez, Galen Xing, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2021)
Open Access | Times Cited: 66
Single-cell sequencing: a promising approach for uncovering the mechanisms of tumor metastasis
Yingying Han, Dan Wang, Lushan Peng, et al.
Journal of Hematology & Oncology (2022) Vol. 15, Iss. 1
Open Access | Times Cited: 62
Unravelling glioblastoma heterogeneity by means of single-cell RNA sequencing
Ana Hernández Martínez, Rodrigo Madurga, Noemí Garcia‐Romero, et al.
Cancer Letters (2021) Vol. 527, pp. 66-79
Open Access | Times Cited: 54
Connecting past and present: single-cell lineage tracing
Cheng Chen, Yuanxin Liao, Guangdun Peng
Protein & Cell (2022) Vol. 13, Iss. 11, pp. 790-807
Open Access | Times Cited: 52
Data analysis guidelines for single-cell RNA-seq in biomedical studies and clinical applications
Min‐Ying Su, Tao Pan, Qiu-Zhen Chen, et al.
Military Medical Research (2022) Vol. 9, Iss. 1
Open Access | Times Cited: 52
Understanding initiation and progression of hepatocellular carcinoma through single cell sequencing
Xinyue Li, Yue Shen, Li Zhang, et al.
Biochimica et Biophysica Acta (BBA) - Reviews on Cancer (2022) Vol. 1877, Iss. 3, pp. 188720-188720
Closed Access | Times Cited: 49
Translational opportunities of single-cell biology in atherosclerosis
Menno P.J. de Winther, Magnus Bäck, Paul C. Evans, et al.
European Heart Journal (2022) Vol. 44, Iss. 14, pp. 1216-1230
Open Access | Times Cited: 42
Microbial fingerprints of methanation in a hybrid electric-biological anaerobic digestion
Bo Wang, Wenzong Liu, Bin Liang, et al.
Water Research (2022) Vol. 226, pp. 119270-119270
Closed Access | Times Cited: 39
Recent advances in T-cell receptor repertoire analysis: Bridging the gap with multimodal single-cell RNA sequencing
Sebastiaan Valkiers, Nicky de Vrij, Sofie Gielis, et al.
ImmunoInformatics (2022) Vol. 5, pp. 100009-100009
Open Access | Times Cited: 38
Single-cell and single-nuclei RNA sequencing as powerful tools to decipher cellular heterogeneity and dysregulation in neurodegenerative diseases
Raquel Cuevas‐Díaz Durán, Juan Carlos González-Orozco, Iván Velasco, et al.
Frontiers in Cell and Developmental Biology (2022) Vol. 10
Open Access | Times Cited: 35
spinDrop: a droplet microfluidic platform to maximise single-cell sequencing information content
Joachim De Jonghe, Tomasz S. Kamiński, David B. Morse, et al.
Nature Communications (2023) Vol. 14, Iss. 1
Open Access | Times Cited: 23
Single-cell RNA sequencing to identify cellular heterogeneity and targets in cardiovascular diseases: from bench to bedside
Xinjie Xu, Xiumeng Hua, Mo Han, et al.
Basic Research in Cardiology (2023) Vol. 118, Iss. 1
Closed Access | Times Cited: 21
Spatial transcriptomics data and analytical methods: An updated perspective
Mohd Danishuddin, Shawez Khan, Jong-Joo Kim
Drug Discovery Today (2024) Vol. 29, Iss. 3, pp. 103889-103889
Closed Access | Times Cited: 7
K-nearest-neighbors induced topological PCA for single cell RNA-sequence data analysis
Sean Cottrell, Yuta Hozumi, Guo‐Wei Wei
Computers in Biology and Medicine (2024) Vol. 175, pp. 108497-108497
Open Access | Times Cited: 6
A systematic review of single-cell RNA sequencing applications and innovations
Fahamidur Rahaman Rafi, Nafeya Rahman Heya, Md Sadman Hafiz, et al.
Computational Biology and Chemistry (2025), pp. 108362-108362
Closed Access
Advancements in single-cell RNA sequencing and spatial transcriptomics: transforming biomedical research
Getnet Molla Desta, Alemayehu Godana Birhanu
Acta Biochimica Polonica (2025) Vol. 72
Open Access
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