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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Using MicrobiomeAnalyst for comprehensive statistical, functional, and meta-analysis of microbiome data
Jasmine Chong, Peng Liu, Guangyan Zhou, et al.
Nature Protocols (2020) Vol. 15, Iss. 3, pp. 799-821
Closed Access | Times Cited: 1394

Showing 1-25 of 1394 citing articles:

Using MetaboAnalyst 5.0 for LC–HRMS spectra processing, multi-omics integration and covariate adjustment of global metabolomics data
Zhiqiang Pang, Guangyan Zhou, Jessica Ewald, et al.
Nature Protocols (2022) Vol. 17, Iss. 8, pp. 1735-1761
Open Access | Times Cited: 1031
Tryptophan-derived microbial metabolites activate the aryl hydrocarbon receptor in tumor-associated macrophages to suppress anti-tumor immunity
Kebria Hezaveh, Rahul Shinde, Andreas Klötgen, et al.
Immunity (2022) Vol. 55, Iss. 2, pp. 324-340.e8
Open Access | Times Cited: 341
Mass spectrometry-based metabolomics in microbiome investigations
Anelize Bauermeister, Helena Mannochio-Russo, Letícia V. Costa‐Lotufo, et al.
Nature Reviews Microbiology (2021) Vol. 20, Iss. 3, pp. 143-160
Open Access | Times Cited: 304
MicrobiomeAnalyst 2.0: comprehensive statistical, functional and integrative analysis of microbiome data
Yao Lü, Guangyan Zhou, Jessica Ewald, et al.
Nucleic Acids Research (2023) Vol. 51, Iss. W1, pp. W310-W318
Open Access | Times Cited: 254
Applications of Machine Learning in Human Microbiome Studies: A Review on Feature Selection, Biomarker Identification, Disease Prediction and Treatment
Laura Judith Marcos-Zambrano, Kanita Karađuzović-Hadžiabdić, Tatjana Lončar-Turukalo, et al.
Frontiers in Microbiology (2021) Vol. 12
Open Access | Times Cited: 243
Bifidobacterium breve CCFM1025 attenuates major depression disorder via regulating gut microbiome and tryptophan metabolism: A randomized clinical trial
Peijun Tian, Ying Chen, Huiyue Zhu, et al.
Brain Behavior and Immunity (2021) Vol. 100, pp. 233-241
Closed Access | Times Cited: 200
Machine learning applications in microbial ecology, human microbiome studies, and environmental monitoring
Ryan B. Ghannam, Stephen M. Techtmann
Computational and Structural Biotechnology Journal (2021) Vol. 19, pp. 1092-1107
Open Access | Times Cited: 172
Human milk oligosaccharide DSLNT and gut microbiome in preterm infants predicts necrotising enterocolitis
A Masi, Nicholas D. Embleton, Christopher A Lamb, et al.
Gut (2020) Vol. 70, Iss. 12, pp. 2273-2282
Open Access | Times Cited: 168
High-throughput cultivation and identification of bacteria from the plant root microbiota
Jingying Zhang, Yongxin Liu, Xiaoxuan Guo, et al.
Nature Protocols (2021) Vol. 16, Iss. 2, pp. 988-1012
Closed Access | Times Cited: 157
Bile acids drive the newborn’s gut microbiota maturation
Niels van Best, Ulrike Rolle‐Kampczyk, Frank G. Schaap, et al.
Nature Communications (2020) Vol. 11, Iss. 1
Open Access | Times Cited: 152
EasyAmplicon: An easy‐to‐use, open‐source, reproducible, and community‐based pipeline for amplicon data analysis in microbiome research
Yongxin Liu, Lei Chen, Tengfei Ma, et al.
iMeta (2023) Vol. 2, Iss. 1
Open Access | Times Cited: 125
ggpicrust2: an R package for PICRUSt2 predicted functional profile analysis and visualization
Yang Chen, Jiahao Mai, Xuan Cao, et al.
Bioinformatics (2023) Vol. 39, Iss. 8
Open Access | Times Cited: 111
Clonal IgA and IgG autoantibodies from individuals at risk for rheumatoid arthritis identify an arthritogenic strain of Subdoligranulum
Meagan E. Chriswell, Adam R. Lefferts, Michael R. Clay, et al.
Science Translational Medicine (2022) Vol. 14, Iss. 668
Open Access | Times Cited: 109
Strain-specific impacts of probiotics are a significant driver of gut microbiome development in very preterm infants
Lauren C. Beck, A Masi, Gregory R. Young, et al.
Nature Microbiology (2022) Vol. 7, Iss. 10, pp. 1525-1535
Open Access | Times Cited: 97
The cancer chemotherapeutic 5-fluorouracil is a potent Fusobacterium nucleatum inhibitor and its activity is modified by intratumoral microbiota
Kaitlyn D. LaCourse, Martha A. Zepeda‐Rivera, Andrew G. Kempchinsky, et al.
Cell Reports (2022) Vol. 41, Iss. 7, pp. 111625-111625
Open Access | Times Cited: 87
Wekemo Bioincloud: A user‐friendly platform for meta‐omics data analyses
Yunyun Gao, Guo‐Xing Zhang, Shunyao Jiang, et al.
iMeta (2024) Vol. 3, Iss. 1
Open Access | Times Cited: 85
Parenteral BCG vaccine induces lung-resident memory macrophages and trained immunity via the gut–lung axis
Mangalakumari Jeyanathan, Maryam Vaseghi‐Shanjani, Sam Afkhami, et al.
Nature Immunology (2022) Vol. 23, Iss. 12, pp. 1687-1702
Open Access | Times Cited: 81
Microbial-host-isozyme analyses reveal microbial DPP4 as a potential antidiabetic target
Kai Wang, Zhiwei Zhang, Jing Hang, et al.
Science (2023) Vol. 381, Iss. 6657
Open Access | Times Cited: 76
Dynamics of rice microbiomes reveal core vertically transmitted seed endophytes
Xiaoxia Zhang, Yinan Ma, Xing Wang, et al.
Microbiome (2022) Vol. 10, Iss. 1
Open Access | Times Cited: 72
The gut microbiome, mild cognitive impairment, and probiotics: A randomized clinical trial in middle-aged and older adults
Mashael R. Aljumaah, Urja Bhatia, Jeffrey Roach, et al.
Clinical Nutrition (2022) Vol. 41, Iss. 11, pp. 2565-2576
Closed Access | Times Cited: 70
Arresting microbiome development limits immune system maturation and resistance to infection in mice
Jean‐Bernard Lubin, Jamal Green, Sarah Maddux, et al.
Cell Host & Microbe (2023) Vol. 31, Iss. 4, pp. 554-570.e7
Open Access | Times Cited: 61
Prebiotic intervention with HAMSAB in untreated essential hypertensive patients assessed in a phase II randomized trial
Hamdi Jama, Dakota Rhys‐Jones, Michael Nakai, et al.
Nature Cardiovascular Research (2023) Vol. 2, Iss. 1, pp. 35-43
Open Access | Times Cited: 59
Web-based multi-omics integration using the Analyst software suite
Jessica Ewald, Guangyan Zhou, Yao Lü, et al.
Nature Protocols (2024) Vol. 19, Iss. 5, pp. 1467-1497
Closed Access | Times Cited: 57
The best practice for microbiome analysis using R
Tao Wen, Guoqing Niu, Tong Chen, et al.
Protein & Cell (2023) Vol. 14, Iss. 10, pp. 713-725
Open Access | Times Cited: 55
An open label, non-randomized study assessing a prebiotic fiber intervention in a small cohort of Parkinson’s disease participants
Deborah A. Hall, Robin M. Voigt, Thaisa M. Cantu-Jungles, et al.
Nature Communications (2023) Vol. 14, Iss. 1
Open Access | Times Cited: 53
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