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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Scalable telomere-to-telomere assembly for diploid and polyploid genomes with double graph
Haoyu Cheng, Mobin Asri, Julian Lucas, et al.
Nature Methods (2024) Vol. 21, Iss. 6, pp. 967-970
Closed Access | Times Cited: 39

Showing 1-25 of 39 citing articles:

Complete sequencing of ape genomes
DongAhn Yoo, Arang Rhie, Prajna Hebbar, et al.
Nature (2025)
Open Access | Times Cited: 2
Telomere-to-telomere phased genome assembly using error-corrected Simplex nanopore reads
Dominik Stanojević, Dehui Lin, Sergey Nurk, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 15
Complete sequencing of ape genomes
DongAhn Yoo, Arang Rhie, Prajna Hebbar, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 14
Chromosome-level scaffolding of haplotype-resolved assemblies using Hi-C data without reference genomes
Xiaofei Zeng, Zili Yi, Xingtan Zhang, et al.
Nature Plants (2024) Vol. 10, Iss. 8, pp. 1184-1200
Closed Access | Times Cited: 11
A familial, telomere-to-telomere reference for humande novomutation and recombination from a four-generation pedigree
David Porubský, Harriet Dashnow, Thomas A. Sasani, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 11
Gapless assembly of complete human and plant chromosomes using only nanopore sequencing
Sergey Koren, Zhigui Bao, Andrea Guarracino, et al.
Genome Research (2024) Vol. 34, Iss. 11, pp. 1919-1930
Open Access | Times Cited: 10
Gapless assembly of complete human and plant chromosomes using only nanopore sequencing
Sergey Koren, Zhigui Bao, Andrea Guarracino, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 8
Plant genome evolution in the genusEucalyptusis driven by structural rearrangements that promote sequence divergence
Scott Ferguson, Ashley Jones, Kevin Murray, et al.
Genome Research (2024)
Open Access | Times Cited: 8
Transposon proliferation drives genome architecture and regulatory evolution in wild and domesticated peppers
Kang Zhang, Hailong Yu, Lingkui Zhang, et al.
Nature Plants (2025)
Closed Access | Times Cited: 1
Centromeric transposable elements and epigenetic status drive karyotypic variation in the eastern hoolock gibbon
Gabrielle A. Hartley, Mariam Okhovat, Savannah J. Hoyt, et al.
Cell Genomics (2025), pp. 100808-100808
Open Access | Times Cited: 1
Unlocking plant genetics with telomere-to-telomere genome assemblies
Vanika Garg, Abhishek Bohra, Martin Mascher, et al.
Nature Genetics (2024) Vol. 56, Iss. 9, pp. 1788-1799
Closed Access | Times Cited: 6
ModDotPlot—rapid and interactive visualization of tandem repeats
Alexander P. Sweeten, Michael C. Schatz, Adam M. Phillippy
Bioinformatics (2024) Vol. 40, Iss. 8
Open Access | Times Cited: 6
Haplotype-resolved gapless genome and chromosome segment substitution lines facilitate gene identification in wild rice
Jingfen Huang, Yilin Zhang, Yapeng Li, et al.
Nature Communications (2024) Vol. 15, Iss. 1
Open Access | Times Cited: 5
When less is more: sketching with minimizers in genomics
Malick Ndiaye, Silvia Prieto-Baños, Lucy Fitzgerald, et al.
Genome biology (2024) Vol. 25, Iss. 1
Open Access | Times Cited: 5
Co-linear chaining on pangenome graphs
Jyotshna Rajput, Ghanshyam Chandra, Chirag Jain
Algorithms for Molecular Biology (2024) Vol. 19, Iss. 1
Open Access | Times Cited: 4
Ribotin: automated assembly and phasing of rDNA morphs
Mikko Rautiainen
Bioinformatics (2024) Vol. 40, Iss. 3
Open Access | Times Cited: 4
ModDotPlot - Rapid and interactive visualization of complex repeats
Alexander P. Sweeten, Michael C. Schatz, Adam M. Phillippy
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 4
The chromosome-scale genome of Black Wolfberry (Lycium ruthenicum) provides useful genomic resources for identifying genes related to anthocyanin biosynthesis and disease resistance
Gulbar Yisilam, Enting Zheng, C Li, et al.
Plant Diversity (2025) Vol. 47, Iss. 2, pp. 201-213
Open Access
CiFi: Accurate long-read chromatin conformation capture with low-input requirements
Sean P. McGinty, Gulhan Kaya, Sheina B. Sim, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2025)
Open Access
A detailed guide to assessing genome assembly based on long-read sequencing data using Inspector
Yan Guo, Yuwei Song, Limin Jiang, et al.
Nature Protocols (2025)
Closed Access
The impact of long-read sequencing on human population-scale genomics
Tobias Rausch, Tobias Marschall, Jan O. Korbel
Genome Research (2025) Vol. 35, Iss. 4, pp. 593-598
Closed Access
Efficient near telomere-to-telomere assembly of Nanopore Simplex reads
Haoyu Cheng, Han Qu, Sean K. McKenzie, et al.
(2025)
Open Access
Human de novo mutation rates from a four-generation pedigree reference
David Porubský, Harriet Dashnow, Thomas A. Sasani, et al.
Nature (2025)
Open Access
A telomere-to-telomere genome assembly of Zhonghuang 13, a widely-grown soybean variety from the original center of Glycine max
Anqi Zhang, Tangchao Kong, Baiquan Sun, et al.
The Crop Journal (2023) Vol. 12, Iss. 1, pp. 142-153
Open Access | Times Cited: 9
The genetic mechanism of B chromosome drive in rye illuminated by chromosome-scale assembly
Jianyong Chen, Jan Bartoš, Anastassia Boudichevskaia, et al.
Nature Communications (2024) Vol. 15, Iss. 1
Open Access | Times Cited: 2
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