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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Detection of m6A from direct RNA sequencing using a multiple instance learning framework
Christopher Hendra, Ploy N. Pratanwanich, Yuk Kei Wan, et al.
Nature Methods (2022) Vol. 19, Iss. 12, pp. 1590-1598
Open Access | Times Cited: 161

Showing 1-25 of 161 citing articles:

Systematic comparison of tools used for m6A mapping from nanopore direct RNA sequencing
Zhen-Dong Zhong, Ying-Yuan Xie, Hong-Xuan Chen, et al.
Nature Communications (2023) Vol. 14, Iss. 1
Open Access | Times Cited: 68
DNA 5-methylcytosine detection and methylation phasing using PacBio circular consensus sequencing
Peng Ni, Fan Nie, Zeyu Zhong, et al.
Nature Communications (2023) Vol. 14, Iss. 1
Open Access | Times Cited: 45
Chemically Modified Platforms for Better RNA Therapeutics
Yesi Shi, Xueyan Zhen, Yiming Zhang, et al.
Chemical Reviews (2024) Vol. 124, Iss. 3, pp. 929-1033
Closed Access | Times Cited: 44
Prediction of m6A and m5C at single-molecule resolution reveals a transcriptome-wide co-occurrence of RNA modifications
Pablo Acera Mateos, Aditya J. Sethi, Aishwarya Ravindran, et al.
Nature Communications (2024) Vol. 15, Iss. 1
Open Access | Times Cited: 40
Nanopore DNA sequencing technologies and their applications towards single-molecule proteomics
Adam Dorey, Stefan Howorka
Nature Chemistry (2024) Vol. 16, Iss. 3, pp. 314-334
Closed Access | Times Cited: 38
Benchmarking of computational methods for m6A profiling with Nanopore direct RNA sequencing
Simone Maestri, Mattia Furlan, Logan Mulroney, et al.
Briefings in Bioinformatics (2024) Vol. 25, Iss. 2
Open Access | Times Cited: 23
Simultaneous nanopore profiling of mRNA m6A and pseudouridine reveals translation coordination
Sihao Huang, Adam C. Wylder, Tao Pan
Nature Biotechnology (2024)
Closed Access | Times Cited: 23
Molecular and physiological changes in the SpaceX Inspiration4 civilian crew
Christopher Jones, Eliah Overbey, Jérôme Lacombe, et al.
Nature (2024) Vol. 632, Iss. 8027, pp. 1155-1164
Open Access | Times Cited: 21
Sequencing accuracy and systematic errors of nanopore direct RNA sequencing
Wang Liu-Wei, Wiep van der Toorn, Patrick Bohn, et al.
BMC Genomics (2024) Vol. 25, Iss. 1
Open Access | Times Cited: 19
Transfer learning enables identification of multiple types of RNA modifications using nanopore direct RNA sequencing
You Wu, Wenna Shao, Mengxiao Yan, et al.
Nature Communications (2024) Vol. 15, Iss. 1
Open Access | Times Cited: 18
Single-molecule epitranscriptomic analysis of full-length HIV-1 RNAs reveals functional roles of site-specific m6As
Alice Baek, Ga-Eun Lee, Sarah Golconda, et al.
Nature Microbiology (2024) Vol. 9, Iss. 5, pp. 1340-1355
Open Access | Times Cited: 17
Charting the epitranscriptomic landscape across RNA biotypes using native RNA nanopore sequencing
Gregor Diensthuber, Eva Maria Novoa
Molecular Cell (2025) Vol. 85, Iss. 2, pp. 276-289
Closed Access | Times Cited: 2
De novo basecalling of RNA modifications at single molecule and nucleotide resolution
Sonia Cruciani, Anna Delgado-Tejedor, Leszek P. Pryszcz, et al.
Genome biology (2025) Vol. 26, Iss. 1
Open Access | Times Cited: 2
Beyond sequencing: machine learning algorithms extract biology hidden in Nanopore signal data
Yuk Kei Wan, Christopher Hendra, Ploy N. Pratanwanich, et al.
Trends in Genetics (2021) Vol. 38, Iss. 3, pp. 246-257
Open Access | Times Cited: 82
DirectRMDB: a database of post-transcriptional RNA modifications unveiled from direct RNA sequencing technology
Yuxin Zhang, Jie Jiang, Jiongming Ma, et al.
Nucleic Acids Research (2022) Vol. 51, Iss. D1, pp. D106-D116
Open Access | Times Cited: 61
DRUMMER—rapid detection of RNA modifications through comparative nanopore sequencing
Jonathan S. Abebe, Alexander M. Price, Katharina E. Hayer, et al.
Bioinformatics (2022) Vol. 38, Iss. 11, pp. 3113-3115
Open Access | Times Cited: 50
Unveiling the future of metabolic medicine: omics technologies driving personalized solutions for precision treatment of metabolic disorders
Samradhi Singh, Devojit Kumar Sarma, Vinod Verma, et al.
Biochemical and Biophysical Research Communications (2023) Vol. 682, pp. 1-20
Closed Access | Times Cited: 39
m6A-driven SF3B1 translation control steers splicing to direct genome integrity and leukemogenesis
Maciej Cieśla, Phuong Cao Thi Ngoc, Sowndarya Muthukumar, et al.
Molecular Cell (2023) Vol. 83, Iss. 7, pp. 1165-1179.e11
Open Access | Times Cited: 23
m7GHub V2.0: an updated database for decoding the N7-methylguanosine (m7G) epitranscriptome
Xuan Wang, Yuxin Zhang, Kunqi Chen, et al.
Nucleic Acids Research (2023) Vol. 52, Iss. D1, pp. D203-D212
Open Access | Times Cited: 23
The rise of epitranscriptomics: recent developments and future directions
Jonas Cerneckis, Guo‐li Ming, Hongjun Song, et al.
Trends in Pharmacological Sciences (2023) Vol. 45, Iss. 1, pp. 24-38
Open Access | Times Cited: 23
Detecting m6A at single-molecular resolution via direct RNA sequencing and realistic training data
Adrian Chan, Isabel S. Naarmann‐de Vries, Carolin P. M. Scheitl, et al.
Nature Communications (2024) Vol. 15, Iss. 1
Open Access | Times Cited: 13
Direct RNA sequencing of astronaut blood reveals spaceflight-associated m6A increases and hematopoietic transcriptional responses
Kirill Grigorev, Theodore M. Nelson, Eliah Overbey, et al.
Nature Communications (2024) Vol. 15, Iss. 1
Open Access | Times Cited: 13
Big data and deep learning for RNA biology
Hyeonseo Hwang, Hyeonseong Jeon, Nagyeong Yeo, et al.
Experimental & Molecular Medicine (2024) Vol. 56, Iss. 6, pp. 1293-1321
Open Access | Times Cited: 11
Enhanced detection of RNA modifications and read mapping with high-accuracy nanopore RNA basecalling models
Gregor Diensthuber, Leszek P. Pryszcz, Laia Llovera, et al.
Genome Research (2024) Vol. 34, Iss. 11, pp. 1865-1877
Closed Access | Times Cited: 10
GLORI for absolute quantification of transcriptome-wide m6A at single-base resolution
Weiguo Shen, Hanxiao Sun, Cong Liu, et al.
Nature Protocols (2024) Vol. 19, Iss. 4, pp. 1252-1287
Closed Access | Times Cited: 9
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