OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!
If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.
Requested Article:
Omnipose: a high-precision morphology-independent solution for bacterial cell segmentation
Kevin J. Cutler, Carsen Stringer, Teresa W. Lo, et al.
Nature Methods (2022) Vol. 19, Iss. 11, pp. 1438-1448
Open Access | Times Cited: 159
Kevin J. Cutler, Carsen Stringer, Teresa W. Lo, et al.
Nature Methods (2022) Vol. 19, Iss. 11, pp. 1438-1448
Open Access | Times Cited: 159
Showing 1-25 of 159 citing articles:
Spatial omics technologies at multimodal and single cell/subcellular level
Jiwoon Park, Junbum Kim, Tyler Lewy, et al.
Genome biology (2022) Vol. 23, Iss. 1
Open Access | Times Cited: 70
Jiwoon Park, Junbum Kim, Tyler Lewy, et al.
Genome biology (2022) Vol. 23, Iss. 1
Open Access | Times Cited: 70
Cellpose3: one-click image restoration for improved cellular segmentation
Carsen Stringer, Marius Pachitariu
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 41
Carsen Stringer, Marius Pachitariu
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 41
The multimodality cell segmentation challenge: toward universal solutions
Jun Ma, Ronald Xie, Shamini Ayyadhury, et al.
Nature Methods (2024) Vol. 21, Iss. 6, pp. 1103-1113
Closed Access | Times Cited: 22
Jun Ma, Ronald Xie, Shamini Ayyadhury, et al.
Nature Methods (2024) Vol. 21, Iss. 6, pp. 1103-1113
Closed Access | Times Cited: 22
An experimental framework to assess biomolecular condensates in bacteria
Y Hoang, Christopher A. Azaldegui, Rachel Dow, et al.
Nature Communications (2024) Vol. 15, Iss. 1
Open Access | Times Cited: 14
Y Hoang, Christopher A. Azaldegui, Rachel Dow, et al.
Nature Communications (2024) Vol. 15, Iss. 1
Open Access | Times Cited: 14
Lysosomal damage sensing and lysophagy initiation by SPG20-ITCH
Pinki Gahlot, Bojana Kravić, Giulia Rota, et al.
Molecular Cell (2024) Vol. 84, Iss. 8, pp. 1556-1569.e10
Open Access | Times Cited: 12
Pinki Gahlot, Bojana Kravić, Giulia Rota, et al.
Molecular Cell (2024) Vol. 84, Iss. 8, pp. 1556-1569.e10
Open Access | Times Cited: 12
DeepBacs for multi-task bacterial image analysis using open-source deep learning approaches
Christoph Spahn, Estibaliz Gómez‐de‐Mariscal, Romain F. Laine, et al.
Communications Biology (2022) Vol. 5, Iss. 1
Open Access | Times Cited: 56
Christoph Spahn, Estibaliz Gómez‐de‐Mariscal, Romain F. Laine, et al.
Communications Biology (2022) Vol. 5, Iss. 1
Open Access | Times Cited: 56
Rapid antibiotic susceptibility testing and species identification for mixed samples
Vinodh Kandavalli, Praneeth Karempudi, Jimmy Larsson, et al.
Nature Communications (2022) Vol. 13, Iss. 1
Open Access | Times Cited: 40
Vinodh Kandavalli, Praneeth Karempudi, Jimmy Larsson, et al.
Nature Communications (2022) Vol. 13, Iss. 1
Open Access | Times Cited: 40
Towards foundation models of biological image segmentation
Jun Ma, Bo Wang
Nature Methods (2023) Vol. 20, Iss. 7, pp. 953-955
Closed Access | Times Cited: 32
Jun Ma, Bo Wang
Nature Methods (2023) Vol. 20, Iss. 7, pp. 953-955
Closed Access | Times Cited: 32
Genetic manipulation of Patescibacteria provides mechanistic insights into microbial dark matter and the epibiotic lifestyle
Yaxi Wang, Larry A. Gallagher, Pia A. Andrade, et al.
Cell (2023) Vol. 186, Iss. 22, pp. 4803-4817.e13
Open Access | Times Cited: 31
Yaxi Wang, Larry A. Gallagher, Pia A. Andrade, et al.
Cell (2023) Vol. 186, Iss. 22, pp. 4803-4817.e13
Open Access | Times Cited: 31
Single‐cell segmentation in bacterial biofilms with an optimized deep learning method enables tracking of cell lineages and measurements of growth rates
Eric Jelli, Takuya Ohmura, Niklas Netter, et al.
Molecular Microbiology (2023) Vol. 119, Iss. 6, pp. 659-676
Open Access | Times Cited: 20
Eric Jelli, Takuya Ohmura, Niklas Netter, et al.
Molecular Microbiology (2023) Vol. 119, Iss. 6, pp. 659-676
Open Access | Times Cited: 20
Phage-triggered reverse transcription assembles a toxic repetitive gene from a noncoding RNA
Max E. Wilkinson, David Li, Linyi Gao, et al.
Science (2024) Vol. 386, Iss. 6717
Closed Access | Times Cited: 10
Max E. Wilkinson, David Li, Linyi Gao, et al.
Science (2024) Vol. 386, Iss. 6717
Closed Access | Times Cited: 10
Molecular definition of the endogenous Toll-like receptor signalling pathways
Daniel Fisch, Tian Zhang, He Sun, et al.
Nature (2024) Vol. 631, Iss. 8021, pp. 635-644
Closed Access | Times Cited: 8
Daniel Fisch, Tian Zhang, He Sun, et al.
Nature (2024) Vol. 631, Iss. 8021, pp. 635-644
Closed Access | Times Cited: 8
MMV_Im2Im: an open-source microscopy machine vision toolbox for image-to-image transformation
Justin Sonneck, Yu Zhou, Jianxu Chen
GigaScience (2024) Vol. 13
Open Access | Times Cited: 7
Justin Sonneck, Yu Zhou, Jianxu Chen
GigaScience (2024) Vol. 13
Open Access | Times Cited: 7
Transient inhibition of cell division in competent pneumococcal cells results from deceleration of the septal peptidoglycan complex
Dimitri Juillot, Cyrille Billaudeau, Aurélien Barbotin, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 7
Dimitri Juillot, Cyrille Billaudeau, Aurélien Barbotin, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 7
Mapping spatial organization and genetic cell-state regulators to target immune evasion in ovarian cancer
Christine Y. Yeh, Karmen Aguirre, Olivia Laveroni, et al.
Nature Immunology (2024) Vol. 25, Iss. 10, pp. 1943-1958
Open Access | Times Cited: 6
Christine Y. Yeh, Karmen Aguirre, Olivia Laveroni, et al.
Nature Immunology (2024) Vol. 25, Iss. 10, pp. 1943-1958
Open Access | Times Cited: 6
Targeting Protein Kinase C-α Prolongs Survival and Restores Liver Function in Sepsis: Evidence from Preclinical Models.
Ling Xiong, Dustin Beyer, Na Liu, et al.
Pharmacological Research (2025) Vol. 212, pp. 107581-107581
Open Access
Ling Xiong, Dustin Beyer, Na Liu, et al.
Pharmacological Research (2025) Vol. 212, pp. 107581-107581
Open Access
Using digital pathology to standardize and automate histological evaluations of environmental samples
Philip Tanabe, Daniel Schlenk, Kristy L. Forsgren, et al.
Environmental Toxicology and Chemistry (2025)
Closed Access
Philip Tanabe, Daniel Schlenk, Kristy L. Forsgren, et al.
Environmental Toxicology and Chemistry (2025)
Closed Access
Differential Responses of Methylobacterium and Sphingomonas Species to Multispecies Interactions in the Phyllosphere
R. Schlechter, Mitja N. P. Remus‐Emsermann
Environmental Microbiology (2025) Vol. 27, Iss. 1
Open Access
R. Schlechter, Mitja N. P. Remus‐Emsermann
Environmental Microbiology (2025) Vol. 27, Iss. 1
Open Access
Deep generative modeling of annotated bacterial biofilm images
Angelina A. Holicheva, Konstantin S. Kozlov, Daniil A. Boiko, et al.
npj Biofilms and Microbiomes (2025) Vol. 11, Iss. 1
Open Access
Angelina A. Holicheva, Konstantin S. Kozlov, Daniil A. Boiko, et al.
npj Biofilms and Microbiomes (2025) Vol. 11, Iss. 1
Open Access
Mitochondrial segmentation and function prediction in live-cell images with deep learning
Yang Ding, Jintao Li, Jiaxin Zhang, et al.
Nature Communications (2025) Vol. 16, Iss. 1
Open Access
Yang Ding, Jintao Li, Jiaxin Zhang, et al.
Nature Communications (2025) Vol. 16, Iss. 1
Open Access
PseudoNeuronGAN: Unpaired Synthetic Image to Pseudo-Neuron Image Translation for Label-Free Neuron Instance Segmentation
Zhenzhen You, Ming Jiang, Zhenghao Shi, et al.
Neurocomputing (2025), pp. 129559-129559
Closed Access
Zhenzhen You, Ming Jiang, Zhenghao Shi, et al.
Neurocomputing (2025), pp. 129559-129559
Closed Access
DNA/polysome phase separation and cell width confinement couple nucleoid segregation to cell growth in Escherichia coli
Alexandros Papagiannakis, Qiwei Yu, Sander K. Govers, et al.
(2025)
Open Access
Alexandros Papagiannakis, Qiwei Yu, Sander K. Govers, et al.
(2025)
Open Access
DNA/polysome phase separation and cell width confinement couple nucleoid segregation to cell growth in Escherichia coli
Alexandros Papagiannakis, Qiwei Yu, Sander K. Govers, et al.
(2025)
Open Access
Alexandros Papagiannakis, Qiwei Yu, Sander K. Govers, et al.
(2025)
Open Access
Antibiotics change the population growth rate heterogeneity and morphology of bacteria
Morten Kals, Emma Kals, Jurij Kotar, et al.
PLoS Pathogens (2025) Vol. 21, Iss. 2, pp. e1012924-e1012924
Open Access
Morten Kals, Emma Kals, Jurij Kotar, et al.
PLoS Pathogens (2025) Vol. 21, Iss. 2, pp. e1012924-e1012924
Open Access
Microscopic-based analysis of nuclei in spheroids via SUNSHINE: An on-chip workflow integrating optical clearing, fluorescence calibration and supervoxel segmentation
Chia-Hsiang Lin, Zi-Chao Leng, Chien-Hsin Yu, et al.
Computers in Biology and Medicine (2025) Vol. 187, pp. 109761-109761
Closed Access
Chia-Hsiang Lin, Zi-Chao Leng, Chien-Hsin Yu, et al.
Computers in Biology and Medicine (2025) Vol. 187, pp. 109761-109761
Closed Access
